RNA–Protein interactions for RNA: ENST00000587945.1

VMP1-206, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-206ENST00000587945 GYG1P46976 350 aa18.08■□□□□ 0.48
VMP1-206ENST00000587945 PRKG1Q13976 671 aa18.08■□□□□ 0.48
VMP1-206ENST00000587945 DLGAP5Q15398 846 aa18.08■□□□□ 0.48
VMP1-206ENST00000587945 ANKRD44Q8N8A2 993 aa18.08■□□□□ 0.48
VMP1-206ENST00000587945 RNF186Q9NXI6 227 aa18.08■□□□□ 0.48
VMP1-206ENST00000587945 RIPOR2Q9Y4F9 1068 aa18.08■□□□□ 0.48
VMP1-206ENST00000587945 CACNA1FO60840 1977 aa18.08■□□□□ 0.48
VMP1-206ENST00000587945 TRPA1O75762 1119 aa18.07■□□□□ 0.48
VMP1-206ENST00000587945 UBE4AQ14139 1066 aa18.07■□□□□ 0.48
VMP1-206ENST00000587945 RABL6Q3YEC7 729 aaPredicted RBP18.07■□□□□ 0.48
VMP1-206ENST00000587945 LRRC24Q50LG9 513 aa18.07■□□□□ 0.48
VMP1-206ENST00000587945 APOBEC3FQ8IUX4 373 aaKnown RBP18.07■□□□□ 0.48
VMP1-206ENST00000587945 AOX1Q06278 1338 aa18.06■□□□□ 0.48
VMP1-206ENST00000587945 NF2P35240 595 aa18.06■□□□□ 0.48
VMP1-206ENST00000587945 CFAP100Q494V2 611 aa18.06■□□□□ 0.48
VMP1-206ENST00000587945 KLHDC4Q8TBB5 520 aa18.06■□□□□ 0.48
VMP1-206ENST00000587945 FAM84BQ96KN1 310 aaPredicted RBP18.06■□□□□ 0.48
VMP1-206ENST00000587945 MCOLN1Q9GZU1 580 aa18.06■□□□□ 0.48
VMP1-206ENST00000587945 USP44Q9H0E7 712 aa18.06■□□□□ 0.48
VMP1-206ENST00000587945 FZD1Q9UP38 647 aa18.06■□□□□ 0.48
VMP1-206ENST00000587945 ZNF646O15015 1829 aaPredicted RBP18.05■□□□□ 0.48
VMP1-206ENST00000587945 CLRN2A0PK11 232 aa18.05■□□□□ 0.48
VMP1-206ENST00000587945 HIBADHP31937 336 aaKnown RBP18.05■□□□□ 0.48
VMP1-206ENST00000587945 FKBP1AP62942 108 aaKnown RBP18.05■□□□□ 0.48
VMP1-206ENST00000587945 MKRN3Q13064 507 aaKnown RBP18.05■□□□□ 0.48
VMP1-206ENST00000587945 MTMR14Q8NCE2 650 aa18.05■□□□□ 0.48
VMP1-206ENST00000587945 TDRD7Q8NHU6 1098 aaKnown RBP18.05■□□□□ 0.48
VMP1-206ENST00000587945 PRMT6Q96LA8 375 aaPredicted RBP18.05■□□□□ 0.48
VMP1-206ENST00000587945 DEFB129Q9H1M3 183 aa18.05■□□□□ 0.48
VMP1-206ENST00000587945 SMC4Q9NTJ3 1288 aa18.05■□□□□ 0.48
VMP1-206ENST00000587945 SAGE1Q9NXZ1 904 aa18.05■□□□□ 0.48
VMP1-206ENST00000587945 CCDC85CA6NKD9 419 aa18.04■□□□□ 0.48
VMP1-206ENST00000587945 PTPN12Q05209 780 aaKnown RBP18.04■□□□□ 0.48
VMP1-206ENST00000587945 METTL24Q5JXM2 366 aa18.04■□□□□ 0.48
VMP1-206ENST00000587945 TRMT2AQ8IZ69 625 aaKnown RBP18.04■□□□□ 0.48
VMP1-206ENST00000587945 PAPPA2Q9BXP8 1791 aa18.04■□□□□ 0.48
VMP1-206ENST00000587945 FAM205AQ6ZU69 1335 aa18.03■□□□□ 0.48
VMP1-206ENST00000587945 MROH5Q6ZUA9 1318 aa18.03■□□□□ 0.48
VMP1-206ENST00000587945 SPDYE2BA6NHP3 402 aa18.03■□□□□ 0.48
VMP1-206ENST00000587945 SPDYE6P0CI01 402 aa18.03■□□□□ 0.48
VMP1-206ENST00000587945 RBM5P52756 815 aaKnown RBP eCLIP18.03■□□□□ 0.48
VMP1-206ENST00000587945 DGKZQ13574 1117 aa18.03■□□□□ 0.48
VMP1-206ENST00000587945 ALDH1L2Q3SY69 923 aa18.03■□□□□ 0.48
VMP1-206ENST00000587945 MFSD14BQ5SR56 506 aa18.03■□□□□ 0.48
VMP1-206ENST00000587945 VEZTQ9HBM0 779 aa18.03■□□□□ 0.48
VMP1-206ENST00000587945 IQSEC3Q9UPP2 1182 aaPredicted RBP18.03■□□□□ 0.48
VMP1-206ENST00000587945 ARMC9Q7Z3E5 817 aa18.02■□□□□ 0.48
VMP1-206ENST00000587945 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.02■□□□□ 0.48
VMP1-206ENST00000587945 ANGEL1Q9UNK9 670 aaKnown RBP18.02■□□□□ 0.48
VMP1-206ENST00000587945 GRIK5Q16478 980 aa18.01■□□□□ 0.47
VMP1-206ENST00000587945 FBXO33Q7Z6M2 555 aa18.01■□□□□ 0.47
VMP1-206ENST00000587945 VGLL2Q8N8G2 317 aa18.01■□□□□ 0.47
VMP1-206ENST00000587945 TTF2Q9UNY4 1162 aaKnown RBP18.01■□□□□ 0.47
VMP1-206ENST00000587945 MYO1BO43795 1136 aa18■□□□□ 0.47
VMP1-206ENST00000587945 CHAF1AQ13111 956 aaPredicted RBP18■□□□□ 0.47
VMP1-206ENST00000587945 LDLRAD1Q5T700 205 aa18■□□□□ 0.47
VMP1-206ENST00000587945 VPS37DQ86XT2 251 aa18■□□□□ 0.47
VMP1-206ENST00000587945 REM2Q8IYK8 340 aaPredicted RBP18■□□□□ 0.47
VMP1-206ENST00000587945 NOB1Q9ULX3 412 aaKnown RBP18■□□□□ 0.47
VMP1-206ENST00000587945 CCER2I3L3R5 266 aa17.99■□□□□ 0.47
VMP1-206ENST00000587945 PDE8BO95263 885 aa17.99■□□□□ 0.47
VMP1-206ENST00000587945 BCAMP50895 628 aa17.99■□□□□ 0.47
VMP1-206ENST00000587945 NBPF12Q5TAG4 269 aaPredicted RBP17.99■□□□□ 0.47
VMP1-206ENST00000587945 TBC1D8O95759 1140 aa17.98■□□□□ 0.47
VMP1-206ENST00000587945 RFX5P48382 616 aaPredicted RBP17.98■□□□□ 0.47
VMP1-206ENST00000587945 RASA3Q14644 834 aa17.98■□□□□ 0.47
VMP1-206ENST00000587945 CAVIN4Q5BKX8 364 aa17.98■□□□□ 0.47
VMP1-206ENST00000587945 TDRD3Q9H7E2 651 aaKnown RBP17.98■□□□□ 0.47
VMP1-206ENST00000587945 SERPINA10Q9UK55 444 aa17.98■□□□□ 0.47
VMP1-206ENST00000587945 PPP2R3BQ9Y5P8 575 aa17.98■□□□□ 0.47
VMP1-206ENST00000587945 A0A1B0GUL6 1792 aa17.98■□□□□ 0.47
VMP1-206ENST00000587945 SSC5DA1L4H1 1573 aa17.97■□□□□ 0.47
VMP1-206ENST00000587945 COL1A1P02452 1464 aaPredicted RBP17.97■□□□□ 0.47
VMP1-206ENST00000587945 FRAT2O75474 233 aaPredicted RBP17.97■□□□□ 0.47
VMP1-206ENST00000587945 CRKP46108 304 aa17.97■□□□□ 0.47
VMP1-206ENST00000587945 TM4SF4P48230 202 aa17.97■□□□□ 0.47
VMP1-206ENST00000587945 DZIP1LQ8IYY4 767 aaKnown RBP17.97■□□□□ 0.47
VMP1-206ENST00000587945 CLMNQ96JQ2 1002 aa17.97■□□□□ 0.47
VMP1-206ENST00000587945 ZNF70Q9UC06 446 aaPredicted RBP17.97■□□□□ 0.47
VMP1-206ENST00000587945 CASP8AP2Q9UKL3 1982 aa17.97■□□□□ 0.47
VMP1-206ENST00000587945 EYA2O00167 538 aa17.96■□□□□ 0.47
VMP1-206ENST00000587945 PPP1R12BO60237 982 aaPredicted RBP17.96■□□□□ 0.47
VMP1-206ENST00000587945 CT47B1P0C2W7 299 aaPredicted RBP17.96■□□□□ 0.47
VMP1-206ENST00000587945 UBTFL1P0CB47 393 aaPredicted RBP17.96■□□□□ 0.47
VMP1-206ENST00000587945 FGFR2P21802 821 aa17.96■□□□□ 0.47
VMP1-206ENST00000587945 SUPT20HL1Q3ZLR7 823 aa17.96■□□□□ 0.47
VMP1-206ENST00000587945 SPDYE2Q495Y8 402 aa17.96■□□□□ 0.47
VMP1-206ENST00000587945 SPRYD7Q5W111 196 aa17.96■□□□□ 0.47
VMP1-206ENST00000587945 SLC10A4Q96EP9 437 aa17.96■□□□□ 0.47
VMP1-206ENST00000587945 PUM3Q15397 648 aaKnown RBP17.95■□□□□ 0.46
VMP1-206ENST00000587945 MAP3K11Q16584 847 aa17.95■□□□□ 0.46
VMP1-206ENST00000587945 CDAN1Q8IWY9 1227 aa17.95■□□□□ 0.46
VMP1-206ENST00000587945 SIL1Q9H173 461 aa17.95■□□□□ 0.46
VMP1-206ENST00000587945 TCP10L2B9ZVM9 353 aa17.94■□□□□ 0.46
VMP1-206ENST00000587945 USP2O75604 605 aaPredicted RBP17.94■□□□□ 0.46
VMP1-206ENST00000587945 IFIT1P09914 478 aaKnown RBP17.94■□□□□ 0.46
VMP1-206ENST00000587945 RARSP54136 660 aaKnown RBP17.94■□□□□ 0.46
VMP1-206ENST00000587945 SREBF2Q12772 1141 aa17.94■□□□□ 0.46
VMP1-206ENST00000587945 ATG9AQ7Z3C6 839 aa17.94■□□□□ 0.46
VMP1-206ENST00000587945 API5Q9BZZ5 524 aaKnown RBP17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms