RNA–Protein interactions for RNA: ENST00000587928.5

ILF3-208, Transcript of interleukin enhancer binding factor 3, human

TSL 2

Gene ILF3, Length 4,230 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ILF3-208	ENST00000587928	SLFNL1	Q499Z3	407 aa		12.85	□□□□□ -0.35
ILF3-208	ENST00000587928	MB21D2	Q8IYB1	491 aa	Predicted RBP	12.85	□□□□□ -0.35
ILF3-208	ENST00000587928	ZCRB1	Q8TBF4	217 aa	Known RBP	12.85	□□□□□ -0.35
ILF3-208	ENST00000587928	RBM28	Q9NW13	759 aa	Known RBP	12.85	□□□□□ -0.35
ILF3-208	ENST00000587928	CWC15	Q9P013	229 aa	Known RBP	12.85	□□□□□ -0.35
ILF3-208	ENST00000587928	ARID4A	P29374	1257 aa	Predicted RBP	12.85	□□□□□ -0.35
ILF3-208	ENST00000587928	HSPA2	P54652	639 aa		12.85	□□□□□ -0.35
ILF3-208	ENST00000587928	PIGB	Q92521	554 aa		12.85	□□□□□ -0.35
ILF3-208	ENST00000587928	ZKSCAN5	Q9Y2L8	839 aa		12.85	□□□□□ -0.35
ILF3-208	ENST00000587928	MORC2	Q9Y6X9	1032 aa	Predicted RBP	12.85	□□□□□ -0.35
ILF3-208	ENST00000587928	SCARF1	Q14162	830 aa		12.84	□□□□□ -0.35
ILF3-208	ENST00000587928	ZNF34	Q8IZ26	560 aa		12.84	□□□□□ -0.35
ILF3-208	ENST00000587928	CEP120	Q8N960	986 aa		12.84	□□□□□ -0.35
ILF3-208	ENST00000587928	MYCBP	Q99417	103 aa	Predicted RBP	12.84	□□□□□ -0.35
ILF3-208	ENST00000587928	LLPH	Q9BRT6	129 aa	Known RBP	12.84	□□□□□ -0.35
ILF3-208	ENST00000587928	SLAIN2	Q9P270	581 aa		12.84	□□□□□ -0.35
ILF3-208	ENST00000587928	GEMIN8	Q9NWZ8	242 aa	Known RBP	12.84	□□□□□ -0.35
ILF3-208	ENST00000587928	ARFGEF1	Q9Y6D6	1849 aa		12.84	□□□□□ -0.35
ILF3-208	ENST00000587928	TCIRG1	Q13488	830 aa		12.84	□□□□□ -0.35
ILF3-208	ENST00000587928	TEX35	Q5T0J7	233 aa		12.84	□□□□□ -0.35
ILF3-208	ENST00000587928	HCLS1	P14317	486 aa	Predicted RBP	12.83	□□□□□ -0.35
ILF3-208	ENST00000587928	CABP4	P57796	275 aa		12.83	□□□□□ -0.35
ILF3-208	ENST00000587928	PRDM11	Q9NQV5	511 aa		12.83	□□□□□ -0.35
ILF3-208	ENST00000587928	EYA2	O00167	538 aa		12.83	□□□□□ -0.36
ILF3-208	ENST00000587928	PIP4K2A	P48426	406 aa	Predicted RBP	12.83	□□□□□ -0.36
ILF3-208	ENST00000587928	CCDC183	Q5T5S1	534 aa		12.83	□□□□□ -0.36
ILF3-208	ENST00000587928	JAKMIP1	Q96N16	626 aa	Known RBP	12.83	□□□□□ -0.36
ILF3-208	ENST00000587928	RNF216	Q9NWF9	866 aa	Predicted RBP	12.83	□□□□□ -0.36
ILF3-208	ENST00000587928	UBE3B	Q7Z3V4	1068 aa		12.83	□□□□□ -0.36
ILF3-208	ENST00000587928	ZSCAN21	Q9Y5A6	473 aa	Predicted RBP	12.83	□□□□□ -0.36
ILF3-208	ENST00000587928	HSPD1	P10809	573 aa	Known RBP	12.83	□□□□□ -0.36
ILF3-208	ENST00000587928	IL2RB	P14784	551 aa		12.83	□□□□□ -0.36
ILF3-208	ENST00000587928	MCMDC2	Q4G0Z9	681 aa		12.83	□□□□□ -0.36
ILF3-208	ENST00000587928	PLA2G4D	Q86XP0	818 aa		12.83	□□□□□ -0.36
ILF3-208	ENST00000587928	MRVI1	Q9Y6F6	885 aa		12.83	□□□□□ -0.36
ILF3-208	ENST00000587928	COL11A2	P13942	1736 aa	Predicted RBP	12.82	□□□□□ -0.36
ILF3-208	ENST00000587928	A1BG	P04217	495 aa		12.82	□□□□□ -0.36
ILF3-208	ENST00000587928	PUS3	Q9BZE2	481 aa	Known RBP	12.82	□□□□□ -0.36
ILF3-208	ENST00000587928	MAP3K15	Q6ZN16	1313 aa		12.82	□□□□□ -0.36
ILF3-208	ENST00000587928	RGL2	O15211	777 aa		12.82	□□□□□ -0.36
ILF3-208	ENST00000587928	ZBTB38	Q8NAP3	1195 aa	Predicted RBP	12.82	□□□□□ -0.36
ILF3-208	ENST00000587928	OSBP2	Q969R2	916 aa		12.82	□□□□□ -0.36
ILF3-208	ENST00000587928	DNM1	Q05193	864 aa	Known RBP	12.82	□□□□□ -0.36
ILF3-208	ENST00000587928	INTS5	Q6P9B9	1019 aa	Known RBP	12.82	□□□□□ -0.36
ILF3-208	ENST00000587928	TOM1L2	Q6ZVM7	507 aa		12.82	□□□□□ -0.36
ILF3-208	ENST00000587928	HSD3B7	Q9H2F3	369 aa		12.82	□□□□□ -0.36
ILF3-208	ENST00000587928	CHMP3	Q9Y3E7	222 aa		12.82	□□□□□ -0.36
ILF3-208	ENST00000587928	CYP46A1	Q9Y6A2	500 aa		12.82	□□□□□ -0.36
ILF3-208	ENST00000587928	KIF13B	Q9NQT8	1826 aa		12.81	□□□□□ -0.36
ILF3-208	ENST00000587928	MYL6B	P14649	208 aa		12.81	□□□□□ -0.36
ILF3-208	ENST00000587928	IL15	P40933	162 aa	Predicted RBP	12.81	□□□□□ -0.36
ILF3-208	ENST00000587928	DEF6	Q9H4E7	631 aa		12.81	□□□□□ -0.36
ILF3-208	ENST00000587928	NDUFB9	Q9Y6M9	179 aa		12.81	□□□□□ -0.36
ILF3-208	ENST00000587928	BOLA2	Q9H3K6	86 aa		12.81	□□□□□ -0.36
ILF3-208	ENST00000587928	GTF3C5	Q9Y5Q8	519 aa	Predicted RBP	12.81	□□□□□ -0.36
ILF3-208	ENST00000587928	LMBR1L	Q6UX01	489 aa		12.81	□□□□□ -0.36
ILF3-208	ENST00000587928	CCDC129	Q6ZRS4	1044 aa		12.81	□□□□□ -0.36
ILF3-208	ENST00000587928	MNS1	Q8NEH6	495 aa		12.81	□□□□□ -0.36
ILF3-208	ENST00000587928	OGFR	Q9NZT2	677 aa		12.81	□□□□□ -0.36
ILF3-208	ENST00000587928	GPS2	Q13227	327 aa		12.8	□□□□□ -0.36
ILF3-208	ENST00000587928	IQCB1	Q15051	598 aa		12.8	□□□□□ -0.36
ILF3-208	ENST00000587928	SHISA4	Q96DD7	197 aa		12.8	□□□□□ -0.36
ILF3-208	ENST00000587928	GDPD2	Q9HCC8	539 aa		12.8	□□□□□ -0.36
ILF3-208	ENST00000587928	CWC25	Q9NXE8	425 aa	Predicted RBP	12.8	□□□□□ -0.36
ILF3-208	ENST00000587928	RCOR1	Q9UKL0	485 aa		12.8	□□□□□ -0.36
ILF3-208	ENST00000587928	ZNF330	Q9Y3S2	320 aa	Predicted RBP	12.8	□□□□□ -0.36
ILF3-208	ENST00000587928	ZNF804B	A4D1E1	1349 aa		12.8	□□□□□ -0.36
ILF3-208	ENST00000587928	NAA16	Q6N069	864 aa	Predicted RBP	12.8	□□□□□ -0.36
ILF3-208	ENST00000587928	GIGYF2	Q6Y7W6	1299 aa	Known RBP	12.8	□□□□□ -0.36
ILF3-208	ENST00000587928	CCDC83	Q8IWF9	413 aa		12.8	□□□□□ -0.36
ILF3-208	ENST00000587928	ZNF274	Q96GC6	653 aa	Predicted RBP	12.8	□□□□□ -0.36
ILF3-208	ENST00000587928		A0A087WZG4	1122 aa		12.8	□□□□□ -0.36
ILF3-208	ENST00000587928	FAM217B	Q9NTX9	383 aa	Predicted RBP	12.8	□□□□□ -0.36
ILF3-208	ENST00000587928	LIG1	P18858	919 aa		12.8	□□□□□ -0.36
ILF3-208	ENST00000587928	HSP90AB3P	Q58FF7	597 aa		12.8	□□□□□ -0.36
ILF3-208	ENST00000587928	NLRP10	Q86W26	655 aa		12.8	□□□□□ -0.36
ILF3-208	ENST00000587928	MYRIP	Q8NFW9	859 aa		12.8	□□□□□ -0.36
ILF3-208	ENST00000587928	TTLL11	Q8NHH1	800 aa		12.8	□□□□□ -0.36
ILF3-208	ENST00000587928	ADAMTSL1	Q8N6G6	1762 aa		12.79	□□□□□ -0.36
ILF3-208	ENST00000587928	NECAB1	Q8N987	351 aa		12.79	□□□□□ -0.36
ILF3-208	ENST00000587928	FAM184A	Q8NB25	1140 aa		12.79	□□□□□ -0.36
ILF3-208	ENST00000587928		U3KPZ7	1027 aa	Predicted RBP	12.79	□□□□□ -0.36
ILF3-208	ENST00000587928	ERVV-1	B6SEH8	477 aa		12.79	□□□□□ -0.36
ILF3-208	ENST00000587928	IRX5	P78411	483 aa	Predicted RBP	12.79	□□□□□ -0.36
ILF3-208	ENST00000587928	HLF	Q16534	295 aa		12.79	□□□□□ -0.36
ILF3-208	ENST00000587928	LEO1	Q8WVC0	666 aa	Predicted RBP	12.79	□□□□□ -0.36
ILF3-208	ENST00000587928	AK7	Q96M32	723 aa		12.79	□□□□□ -0.36
ILF3-208	ENST00000587928	LARP6	Q9BRS8	491 aa	Known RBP	12.79	□□□□□ -0.36
ILF3-208	ENST00000587928	PAG1	Q9NWQ8	432 aa		12.79	□□□□□ -0.36
ILF3-208	ENST00000587928	NTRK3	Q16288	839 aa		12.79	□□□□□ -0.36
ILF3-208	ENST00000587928	GOLPH3L	Q9H4A5	285 aa		12.79	□□□□□ -0.36
ILF3-208	ENST00000587928		E7EWF7	191 aa		12.78	□□□□□ -0.36
ILF3-208	ENST00000587928	JAK2	O60674	1132 aa		12.78	□□□□□ -0.36
ILF3-208	ENST00000587928	NOL8	Q76FK4	1167 aa	Known RBP	12.78	□□□□□ -0.36
ILF3-208	ENST00000587928	ADORA1	P30542	326 aa		12.78	□□□□□ -0.36
ILF3-208	ENST00000587928	ANKRD1	Q15327	319 aa		12.78	□□□□□ -0.36
ILF3-208	ENST00000587928	ATP5J2-PTCD1	G3V325	749 aa		12.78	□□□□□ -0.36
ILF3-208	ENST00000587928	PTCD1	O75127	700 aa	Known RBP	12.78	□□□□□ -0.36
ILF3-208	ENST00000587928	FGR	P09769	529 aa		12.77	□□□□□ -0.36
ILF3-208	ENST00000587928	PDIA3	P30101	505 aa	Known RBP	12.77	□□□□□ -0.36

Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms