RNA–Protein interactions for RNA: ENST00000587788.1

SDF2-206, Transcript of stromal cell derived factor 2, humanhuman

TSL 3

Gene SDF2, Length 444 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-206ENST00000587788 FKBP5Q13451 457 aaPredicted RBP7.03□□□□□ -1.28
SDF2-206ENST00000587788 TTC22Q5TAA0 569 aa7.03□□□□□ -1.28
SDF2-206ENST00000587788 BRICD5Q6PL45 260 aa7.03□□□□□ -1.28
SDF2-206ENST00000587788 BLOC1S3Q6QNY0 202 aa7.03□□□□□ -1.28
SDF2-206ENST00000587788 THSD4Q6ZMP0 1018 aa7.03□□□□□ -1.28
SDF2-206ENST00000587788 RNF19BQ6ZMZ0 732 aa7.03□□□□□ -1.28
SDF2-206ENST00000587788 TBC1D9Q6ZT07 1266 aa7.03□□□□□ -1.28
SDF2-206ENST00000587788 HOMEZQ8IX15 550 aa7.03□□□□□ -1.28
SDF2-206ENST00000587788 LRRN4Q8WUT4 740 aa7.03□□□□□ -1.28
SDF2-206ENST00000587788 FHDC1Q9C0D6 1143 aaPredicted RBP7.03□□□□□ -1.28
SDF2-206ENST00000587788 SRCIN1Q9C0H9 1055 aa7.03□□□□□ -1.28
SDF2-206ENST00000587788 ANTXR1Q9H6X2 564 aa7.03□□□□□ -1.28
SDF2-206ENST00000587788 CCDC87Q9NVE4 849 aa7.03□□□□□ -1.28
SDF2-206ENST00000587788 PPP1R1BQ9UD71 204 aaPredicted RBP7.03□□□□□ -1.28
SDF2-206ENST00000587788 RTCBQ9Y3I0 505 aaKnown RBP7.03□□□□□ -1.28
SDF2-206ENST00000587788 NDUFB9Q9Y6M9 179 aa7.03□□□□□ -1.28
SDF2-206ENST00000587788 COL15A1P39059 1388 aa7.03□□□□□ -1.28
SDF2-206ENST00000587788 RAB11FIP3O75154 756 aa7.02□□□□□ -1.29
SDF2-206ENST00000587788 REC8O95072 547 aa7.02□□□□□ -1.29
SDF2-206ENST00000587788 ATP8B2P98198 1209 aa7.02□□□□□ -1.29
SDF2-206ENST00000587788 IRF5Q13568 498 aa7.02□□□□□ -1.29
SDF2-206ENST00000587788 KSR2Q6VAB6 950 aa7.02□□□□□ -1.29
SDF2-206ENST00000587788 FLAD1Q8NFF5 587 aa7.02□□□□□ -1.29
SDF2-206ENST00000587788 MEIS3Q99687 375 aa7.02□□□□□ -1.29
SDF2-206ENST00000587788 PLSCR2Q9NRY7 297 aa7.02□□□□□ -1.29
SDF2-206ENST00000587788 WBP1LQ9NX94 342 aa7.02□□□□□ -1.29
SDF2-206ENST00000587788 USP16Q9Y5T5 823 aa7.02□□□□□ -1.29
SDF2-206ENST00000587788 ARFGEF2Q9Y6D5 1785 aa7.02□□□□□ -1.29
SDF2-206ENST00000587788 AOX1Q06278 1338 aa7.01□□□□□ -1.29
SDF2-206ENST00000587788 USP42Q9H9J4 1324 aaKnown RBP7.01□□□□□ -1.29
SDF2-206ENST00000587788 ARFGEF1Q9Y6D6 1849 aa7.01□□□□□ -1.29
SDF2-206ENST00000587788 CACNA1FO60840 1977 aa7.01□□□□□ -1.29
SDF2-206ENST00000587788 LAMB2P55268 1798 aa7.01□□□□□ -1.29
SDF2-206ENST00000587788 IBTKQ9P2D0 1353 aaPredicted RBP7.01□□□□□ -1.29
SDF2-206ENST00000587788 EPB41L2O43491 1005 aaKnown RBP7.01□□□□□ -1.29
SDF2-206ENST00000587788 A1BGP04217 495 aa7.01□□□□□ -1.29
SDF2-206ENST00000587788 GYS1P13807 737 aa7.01□□□□□ -1.29
SDF2-206ENST00000587788 RABEP1Q15276 862 aa7.01□□□□□ -1.29
SDF2-206ENST00000587788 HSP90AB4PQ58FF6 505 aa7.01□□□□□ -1.29
SDF2-206ENST00000587788 TRAPPC3LQ5T215 181 aa7.01□□□□□ -1.29
SDF2-206ENST00000587788 SLC4A10Q6U841 1118 aa7.01□□□□□ -1.29
SDF2-206ENST00000587788 CCDC82Q8N4S0 544 aa7.01□□□□□ -1.29
SDF2-206ENST00000587788 NLGN2Q8NFZ4 835 aa7.01□□□□□ -1.29
SDF2-206ENST00000587788 SYT17Q9BSW7 474 aa7.01□□□□□ -1.29
SDF2-206ENST00000587788 PRM3Q9NNZ6 103 aa7.01□□□□□ -1.29
SDF2-206ENST00000587788 CHPF2Q9P2E5 772 aa7.01□□□□□ -1.29
SDF2-206ENST00000587788 PCDHB3Q9Y5E6 796 aa7.01□□□□□ -1.29
SDF2-206ENST00000587788 CCDC88AQ3V6T2 1871 aa7□□□□□ -1.29
SDF2-206ENST00000587788 TNRC6CQ9HCJ0 1690 aaKnown RBP7□□□□□ -1.29
SDF2-206ENST00000587788 PI4KAP2A4QPH2 592 aa7□□□□□ -1.29
SDF2-206ENST00000587788 FRAT2O75474 233 aaPredicted RBP7□□□□□ -1.29
SDF2-206ENST00000587788 ALDH1L1O75891 902 aa7□□□□□ -1.29
SDF2-206ENST00000587788 UBTFL1P0CB47 393 aaPredicted RBP7□□□□□ -1.29
SDF2-206ENST00000587788 RFC4P35249 363 aa7□□□□□ -1.29
SDF2-206ENST00000587788 EIF5P55010 431 aaKnown RBP7□□□□□ -1.29
SDF2-206ENST00000587788 NEXNQ0ZGT2 675 aa7□□□□□ -1.29
SDF2-206ENST00000587788 NBPF10Q6P3W6 841 aaKnown RBP7□□□□□ -1.29
SDF2-206ENST00000587788 LYPD8Q6UX82 237 aa7□□□□□ -1.29
SDF2-206ENST00000587788 G2E3Q7L622 706 aa7□□□□□ -1.29
SDF2-206ENST00000587788 SCUBE3Q8IX30 993 aa7□□□□□ -1.29
SDF2-206ENST00000587788 NBPF15Q8N660 670 aa7□□□□□ -1.29
SDF2-206ENST00000587788 PI4KAP1Q8N8J0 262 aa7□□□□□ -1.29
SDF2-206ENST00000587788 DNAAF4Q8WXU2 420 aa7□□□□□ -1.29
SDF2-206ENST00000587788 USB1Q9BQ65 265 aaKnown RBP7□□□□□ -1.29
SDF2-206ENST00000587788 LRRCC1Q9C099 1032 aa7□□□□□ -1.29
SDF2-206ENST00000587788 PHAXQ9H814 394 aaKnown RBP7□□□□□ -1.29
SDF2-206ENST00000587788 STAP2Q9UGK3 403 aa7□□□□□ -1.29
SDF2-206ENST00000587788 POTEMA6NI47 508 aa6.99□□□□□ -1.29
SDF2-206ENST00000587788 F6X3S4 739 aa6.99□□□□□ -1.29
SDF2-206ENST00000587788 NR1I2O75469 434 aa6.99□□□□□ -1.29
SDF2-206ENST00000587788 MMP10P09238 476 aa6.99□□□□□ -1.29
SDF2-206ENST00000587788 GSPT1P15170 499 aaKnown RBP6.99□□□□□ -1.29
SDF2-206ENST00000587788 SDSP20132 328 aa6.99□□□□□ -1.29
SDF2-206ENST00000587788 POLD1P28340 1107 aa6.99□□□□□ -1.29
SDF2-206ENST00000587788 ABL2P42684 1182 aa6.99□□□□□ -1.29
SDF2-206ENST00000587788 DDR1Q08345 913 aa6.99□□□□□ -1.29
SDF2-206ENST00000587788 MSS51Q4VC12 460 aa6.99□□□□□ -1.29
SDF2-206ENST00000587788 USPL1Q5W0Q7 1092 aa6.99□□□□□ -1.29
SDF2-206ENST00000587788 NYAP1Q6ZVC0 841 aa6.99□□□□□ -1.29
SDF2-206ENST00000587788 COPS6Q7L5N1 327 aa6.99□□□□□ -1.29
SDF2-206ENST00000587788 LINS1Q8NG48 757 aa6.99□□□□□ -1.29
SDF2-206ENST00000587788 PLBD2Q8NHP8 589 aa6.99□□□□□ -1.29
SDF2-206ENST00000587788 SLKQ9H2G2 1235 aaPredicted RBP6.99□□□□□ -1.29
SDF2-206ENST00000587788 ZNF330Q9Y3S2 320 aaPredicted RBP6.99□□□□□ -1.29
SDF2-206ENST00000587788 C10orf71Q711Q0 1435 aa6.99□□□□□ -1.29
SDF2-206ENST00000587788 SBF1O95248 1867 aa6.98□□□□□ -1.29
SDF2-206ENST00000587788 K7ELQ4 463 aaPredicted RBP6.98□□□□□ -1.29
SDF2-206ENST00000587788 ERC2O15083 957 aa6.98□□□□□ -1.29
SDF2-206ENST00000587788 FMNL1O95466 1100 aaPredicted RBP6.98□□□□□ -1.29
SDF2-206ENST00000587788 HSP90AA1P07900 732 aaKnown RBP6.98□□□□□ -1.29
SDF2-206ENST00000587788 MYL6BP14649 208 aa6.98□□□□□ -1.29
SDF2-206ENST00000587788 MCCP23508 829 aa6.98□□□□□ -1.29
SDF2-206ENST00000587788 IL6STP40189 918 aaPredicted RBP6.98□□□□□ -1.29
SDF2-206ENST00000587788 PDE1AP54750 535 aa6.98□□□□□ -1.29
SDF2-206ENST00000587788 TRIM28Q13263 835 aaKnown RBP6.98□□□□□ -1.29
SDF2-206ENST00000587788 BEND3Q5T5X7 828 aa6.98□□□□□ -1.29
SDF2-206ENST00000587788 EPS8L1Q8TE68 723 aa6.98□□□□□ -1.29
SDF2-206ENST00000587788 SSH3Q8TE77 659 aa6.98□□□□□ -1.29
SDF2-206ENST00000587788 GBP4Q96PP9 640 aa6.98□□□□□ -1.29
SDF2-206ENST00000587788 KIF2CQ99661 725 aa6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 78.8 ms