RNA–Protein interactions for RNA: ENST00000587730.5

DDX39A-206, Transcript of DExD-box helicase 39A, humanhuman

TSL 1 (best)

Gene DDX39A, Length 1,813 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-206ENST00000587730 CEBPZQ03701 1054 aaKnown RBP21.66■■□□□ 1.06
DDX39A-206ENST00000587730 CEP135Q66GS9 1140 aa21.66■■□□□ 1.06
DDX39A-206ENST00000587730 FMR1NBQ8N0W7 255 aaPredicted RBP21.66■■□□□ 1.06
DDX39A-206ENST00000587730 A0A1B0GUL7 405 aa21.65■■□□□ 1.06
DDX39A-206ENST00000587730 KCNJ6P48051 423 aa21.65■■□□□ 1.06
DDX39A-206ENST00000587730 DHX40Q8IX18 779 aaKnown RBP21.65■■□□□ 1.06
DDX39A-206ENST00000587730 JARID2Q92833 1246 aaPredicted RBP21.65■■□□□ 1.06
DDX39A-206ENST00000587730 PCDH11XQ9BZA7 1347 aa21.65■■□□□ 1.06
DDX39A-206ENST00000587730 PCDH11YQ9BZA8 1340 aa21.65■■□□□ 1.06
DDX39A-206ENST00000587730 TNS3Q68CZ2 1445 aa21.65■■□□□ 1.06
DDX39A-206ENST00000587730 LAMA4Q16363 1823 aa21.65■■□□□ 1.06
DDX39A-206ENST00000587730 SF3A1Q15459 793 aaKnown RBP21.64■■□□□ 1.06
DDX39A-206ENST00000587730 TSC1Q92574 1164 aa21.64■■□□□ 1.06
DDX39A-206ENST00000587730 SDF4Q9BRK5 362 aa21.64■■□□□ 1.06
DDX39A-206ENST00000587730 OSBPL5Q9H0X9 879 aaPredicted RBP21.64■■□□□ 1.06
DDX39A-206ENST00000587730 SKILP12757 684 aa21.64■■□□□ 1.05
DDX39A-206ENST00000587730 CCT2P78371 535 aaKnown RBP21.64■■□□□ 1.05
DDX39A-206ENST00000587730 CCDC144BQ3MJ40 725 aa21.64■■□□□ 1.05
DDX39A-206ENST00000587730 CCDC144CPQ8IYA2 1237 aa21.64■■□□□ 1.05
DDX39A-206ENST00000587730 CCDC150Q8NCX0 1101 aa21.64■■□□□ 1.05
DDX39A-206ENST00000587730 C8orf76Q96K31 380 aa21.64■■□□□ 1.05
DDX39A-206ENST00000587730 NUP188Q5SRE5 1749 aa21.64■■□□□ 1.05
DDX39A-206ENST00000587730 TIMM10P62072 90 aa21.63■■□□□ 1.05
DDX39A-206ENST00000587730 DMTNQ08495 405 aa21.63■■□□□ 1.05
DDX39A-206ENST00000587730 STK38Q15208 465 aa21.63■■□□□ 1.05
DDX39A-206ENST00000587730 PTPN14Q15678 1187 aa21.63■■□□□ 1.05
DDX39A-206ENST00000587730 LINC00301Q8NCQ3 95 aa21.63■■□□□ 1.05
DDX39A-206ENST00000587730 NAP1L2Q9ULW6 460 aaPredicted RBP21.63■■□□□ 1.05
DDX39A-206ENST00000587730 PCDHA7Q9UN72 937 aa21.63■■□□□ 1.05
DDX39A-206ENST00000587730 ROBO1Q9Y6N7 1651 aa21.63■■□□□ 1.05
DDX39A-206ENST00000587730 NBPF26B4DH59 902 aa21.62■■□□□ 1.05
DDX39A-206ENST00000587730 NCBP1Q09161 790 aaKnown RBP21.62■■□□□ 1.05
DDX39A-206ENST00000587730 NBPF14Q5TI25 921 aa21.62■■□□□ 1.05
DDX39A-206ENST00000587730 NBPF10Q6P3W6 841 aaKnown RBP21.62■■□□□ 1.05
DDX39A-206ENST00000587730 NYAP1Q6ZVC0 841 aa21.62■■□□□ 1.05
DDX39A-206ENST00000587730 NBPF15Q8N660 670 aa21.62■■□□□ 1.05
DDX39A-206ENST00000587730 FBXO18Q8NFZ0 1043 aa21.62■■□□□ 1.05
DDX39A-206ENST00000587730 TTC39AQ5SRH9 613 aa21.62■■□□□ 1.05
DDX39A-206ENST00000587730 GORABQ5T7V8 394 aa21.62■■□□□ 1.05
DDX39A-206ENST00000587730 NCOA7Q8NI08 942 aa21.62■■□□□ 1.05
DDX39A-206ENST00000587730 APPBP2Q92624 585 aa21.62■■□□□ 1.05
DDX39A-206ENST00000587730 KIAA1468Q9P260 1216 aa21.62■■□□□ 1.05
DDX39A-206ENST00000587730 TJP1Q07157 1748 aa21.61■■□□□ 1.05
DDX39A-206ENST00000587730 CCDC69A6NI79 296 aa21.61■■□□□ 1.05
DDX39A-206ENST00000587730 MYO1BO43795 1136 aa21.61■■□□□ 1.05
DDX39A-206ENST00000587730 CDKL5O76039 1030 aa21.61■■□□□ 1.05
DDX39A-206ENST00000587730 TRIM28Q13263 835 aaKnown RBP21.61■■□□□ 1.05
DDX39A-206ENST00000587730 CCDC57Q2TAC2 916 aa21.61■■□□□ 1.05
DDX39A-206ENST00000587730 SYNE3Q6ZMZ3 975 aa21.61■■□□□ 1.05
DDX39A-206ENST00000587730 RALYLQ86SE5 291 aaKnown RBP21.61■■□□□ 1.05
DDX39A-206ENST00000587730 TIGD1Q96MW7 591 aa21.61■■□□□ 1.05
DDX39A-206ENST00000587730 NCOA5Q9HCD5 579 aaKnown RBP21.61■■□□□ 1.05
DDX39A-206ENST00000587730 OGFRQ9NZT2 677 aa21.61■■□□□ 1.05
DDX39A-206ENST00000587730 CPLX1O14810 134 aa21.6■■□□□ 1.05
DDX39A-206ENST00000587730 SPTLC2O15270 562 aa21.6■■□□□ 1.05
DDX39A-206ENST00000587730 CCP110O43303 1012 aa21.6■■□□□ 1.05
DDX39A-206ENST00000587730 FDPSP14324 419 aaKnown RBP21.6■■□□□ 1.05
DDX39A-206ENST00000587730 DDX24Q9GZR7 859 aaKnown RBP eCLIP21.6■■□□□ 1.051e-7■■■■□ 20.1
DDX39A-206ENST00000587730 UBR2Q8IWV8 1755 aa21.6■■□□□ 1.05
DDX39A-206ENST00000587730 M0R2C6 588 aa21.59■■□□□ 1.05
DDX39A-206ENST00000587730 CHGBP05060 677 aa21.59■■□□□ 1.05
DDX39A-206ENST00000587730 PIP4K2AP48426 406 aaPredicted RBP21.59■■□□□ 1.05
DDX39A-206ENST00000587730 AOPEPQ8N6M6 819 aa21.59■■□□□ 1.05
DDX39A-206ENST00000587730 JMYQ8N9B5 988 aa21.59■■□□□ 1.05
DDX39A-206ENST00000587730 PLA2G12BQ9BX93 195 aa21.59■■□□□ 1.05
DDX39A-206ENST00000587730 PRC1O43663 620 aa21.59■■□□□ 1.05
DDX39A-206ENST00000587730 CMA1P23946 247 aa21.59■■□□□ 1.05
DDX39A-206ENST00000587730 NKX1-1Q15270 411 aaPredicted RBP21.59■■□□□ 1.05
DDX39A-206ENST00000587730 MB21D2Q8IYB1 491 aaPredicted RBP21.59■■□□□ 1.05
DDX39A-206ENST00000587730 KIF18AQ8NI77 898 aa21.59■■□□□ 1.05
DDX39A-206ENST00000587730 ORC3Q9UBD5 711 aaPredicted RBP21.59■■□□□ 1.05
DDX39A-206ENST00000587730 PRDM4Q9UKN5 801 aa21.59■■□□□ 1.05
DDX39A-206ENST00000587730 CCZ1BP86790 482 aa21.58■■□□□ 1.05
DDX39A-206ENST00000587730 CCZ1P86791 482 aaPredicted RBP21.58■■□□□ 1.05
DDX39A-206ENST00000587730 MYSM1Q5VVJ2 828 aa21.58■■□□□ 1.05
DDX39A-206ENST00000587730 CCAR2Q8N163 923 aaKnown RBP21.58■■□□□ 1.05
DDX39A-206ENST00000587730 OSBP2Q969R2 916 aa21.58■■□□□ 1.05
DDX39A-206ENST00000587730 ISCA1Q9BUE6 129 aa21.58■■□□□ 1.05
DDX39A-206ENST00000587730 FTOQ9C0B1 505 aaKnown RBP eCLIP21.58■■□□□ 1.05
DDX39A-206ENST00000587730 GOLGA8BA8MQT2 603 aa21.57■■□□□ 1.04
DDX39A-206ENST00000587730 IKBKBO14920 756 aa21.57■■□□□ 1.04
DDX39A-206ENST00000587730 SLC3A2P08195 630 aaKnown RBP21.57■■□□□ 1.04
DDX39A-206ENST00000587730 ZSCAN20P17040 1043 aaPredicted RBP21.57■■□□□ 1.04
DDX39A-206ENST00000587730 NLRP12P59046 1061 aa21.57■■□□□ 1.04
DDX39A-206ENST00000587730 WASHC4Q2M389 1173 aa21.57■■□□□ 1.04
DDX39A-206ENST00000587730 LRRC24Q50LG9 513 aa21.57■■□□□ 1.04
DDX39A-206ENST00000587730 CPLX2Q6PUV4 134 aaKnown RBP21.57■■□□□ 1.04
DDX39A-206ENST00000587730 TTLL7Q6ZT98 887 aa21.57■■□□□ 1.04
DDX39A-206ENST00000587730 KLF18A0A0U1RQI7 1052 aa21.57■■□□□ 1.04
DDX39A-206ENST00000587730 ZNF213O14771 459 aa21.57■■□□□ 1.04
DDX39A-206ENST00000587730 TRDNQ13061 729 aa21.57■■□□□ 1.04
DDX39A-206ENST00000587730 ZCRB1Q8TBF4 217 aaKnown RBP21.57■■□□□ 1.04
DDX39A-206ENST00000587730 ERO1AQ96HE7 468 aa21.57■■□□□ 1.04
DDX39A-206ENST00000587730 ZNF512BQ96KM6 892 aaPredicted RBP21.57■■□□□ 1.04
DDX39A-206ENST00000587730 ARID3AQ99856 593 aa21.57■■□□□ 1.04
DDX39A-206ENST00000587730 KCPQ6ZWJ8 1503 aa21.57■■□□□ 1.04
DDX39A-206ENST00000587730 PSDA5PKW4 1024 aaPredicted RBP21.56■■□□□ 1.04
DDX39A-206ENST00000587730 NDUFA8P51970 172 aa21.56■■□□□ 1.04
DDX39A-206ENST00000587730 FOSBP53539 338 aa21.56■■□□□ 1.04
DDX39A-206ENST00000587730 FKBP4Q02790 459 aaKnown RBP eCLIP21.56■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms