RNA–Protein interactions for RNA: ENST00000587327.5

PRKCSH-205, Transcript of protein kinase C substrate 80K-H, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PRKCSH, Length 2,189 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-205ENST00000587327 ANKRD7Q92527 254 aa19.72■□□□□ 0.75
PRKCSH-205ENST00000587327 ASAP1Q9ULH1 1129 aa19.72■□□□□ 0.75
PRKCSH-205ENST00000587327 AHDC1Q5TGY3 1603 aaPredicted RBP19.72■□□□□ 0.75
PRKCSH-205ENST00000587327 ME1P48163 572 aa19.71■□□□□ 0.75
PRKCSH-205ENST00000587327 ZNF594Q96JF6 807 aaPredicted RBP19.71■□□□□ 0.75
PRKCSH-205ENST00000587327 CARMIL3Q8ND23 1372 aa19.71■□□□□ 0.75
PRKCSH-205ENST00000587327 PPFIA3O75145 1194 aa19.71■□□□□ 0.75
PRKCSH-205ENST00000587327 GUCY1B3Q02153 619 aa19.71■□□□□ 0.75
PRKCSH-205ENST00000587327 PPP4R3BQ5MIZ7 849 aa19.71■□□□□ 0.75
PRKCSH-205ENST00000587327 LRRC8AQ8IWT6 810 aa19.71■□□□□ 0.75
PRKCSH-205ENST00000587327 PPIL4Q8WUA2 492 aaKnown RBP eCLIP19.71■□□□□ 0.75
PRKCSH-205ENST00000587327 ANO10Q9NW15 660 aa19.71■□□□□ 0.75
PRKCSH-205ENST00000587327 WNK3Q9BYP7 1800 aa19.7■□□□□ 0.74
PRKCSH-205ENST00000587327 BECN2A8MW95 431 aa19.7■□□□□ 0.74
PRKCSH-205ENST00000587327 M0R2C6 588 aa19.7■□□□□ 0.74
PRKCSH-205ENST00000587327 TNNT1P13805 278 aa19.7■□□□□ 0.74
PRKCSH-205ENST00000587327 FDPSP14324 419 aaKnown RBP19.7■□□□□ 0.74
PRKCSH-205ENST00000587327 TTLL5Q6EMB2 1281 aa19.7■□□□□ 0.74
PRKCSH-205ENST00000587327 DNAJC10Q8IXB1 793 aa19.7■□□□□ 0.74
PRKCSH-205ENST00000587327 PDCL2Q8N4E4 241 aa19.7■□□□□ 0.74
PRKCSH-205ENST00000587327 FSIP1Q8NA03 581 aa19.7■□□□□ 0.74
PRKCSH-205ENST00000587327 SMTNL1A8MU46 457 aa19.7■□□□□ 0.74
PRKCSH-205ENST00000587327 NEMFO60524 1076 aa19.7■□□□□ 0.74
PRKCSH-205ENST00000587327 DHX40Q8IX18 779 aaKnown RBP19.7■□□□□ 0.74
PRKCSH-205ENST00000587327 OSBP2Q969R2 916 aa19.7■□□□□ 0.74
PRKCSH-205ENST00000587327 ISCA1Q9BUE6 129 aa19.7■□□□□ 0.74
PRKCSH-205ENST00000587327 LRP6O75581 1613 aa19.69■□□□□ 0.74
PRKCSH-205ENST00000587327 RTEL1Q9NZ71 1219 aa19.69■□□□□ 0.74
PRKCSH-205ENST00000587327 PAXBP1Q9Y5B6 917 aa19.69■□□□□ 0.74
PRKCSH-205ENST00000587327 ADALQ6DHV7 355 aa19.68■□□□□ 0.74
PRKCSH-205ENST00000587327 FMR1NBQ8N0W7 255 aaPredicted RBP19.68■□□□□ 0.74
PRKCSH-205ENST00000587327 PUS3Q9BZE2 481 aaKnown RBP19.68■□□□□ 0.74
PRKCSH-205ENST00000587327 CTNNA3Q9UI47 895 aa19.68■□□□□ 0.74
PRKCSH-205ENST00000587327 PCDHA7Q9UN72 937 aa19.68■□□□□ 0.74
PRKCSH-205ENST00000587327 SPEF2Q9C093 1822 aa19.68■□□□□ 0.74
PRKCSH-205ENST00000587327 RBM6P78332 1123 aaKnown RBP19.68■□□□□ 0.74
PRKCSH-205ENST00000587327 FKBP4Q02790 459 aaKnown RBP eCLIP19.68■□□□□ 0.74
PRKCSH-205ENST00000587327 TPD52L1Q16890 204 aaPredicted RBP19.68■□□□□ 0.74
PRKCSH-205ENST00000587327 LRRFIP1Q32MZ4 808 aaKnown RBP19.68■□□□□ 0.74
PRKCSH-205ENST00000587327 CEP126Q9P2H0 1117 aa19.68■□□□□ 0.74
PRKCSH-205ENST00000587327 MRPS27Q92552 414 aaKnown RBP19.67■□□□□ 0.74
PRKCSH-205ENST00000587327 BCL9O00512 1426 aa19.67■□□□□ 0.74
PRKCSH-205ENST00000587327 A0A087WWV3 80 aa19.67■□□□□ 0.74
PRKCSH-205ENST00000587327 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP19.67■□□□□ 0.74
PRKCSH-205ENST00000587327 A0A1W2PQ27 194 aa19.67■□□□□ 0.74
PRKCSH-205ENST00000587327 A0A1W2PQ64 194 aa19.67■□□□□ 0.74
PRKCSH-205ENST00000587327 A0A1W2PQD8 194 aa19.67■□□□□ 0.74
PRKCSH-205ENST00000587327 CEP57L1Q8IYX8 460 aa19.67■□□□□ 0.74
PRKCSH-205ENST00000587327 NAT10Q9H0A0 1025 aaKnown RBP19.67■□□□□ 0.74
PRKCSH-205ENST00000587327 ZNF330Q9Y3S2 320 aaPredicted RBP19.67■□□□□ 0.74
PRKCSH-205ENST00000587327 FOXP2O15409 715 aa19.66■□□□□ 0.74
PRKCSH-205ENST00000587327 TCIRG1Q13488 830 aa19.66■□□□□ 0.74
PRKCSH-205ENST00000587327 SYCP1Q15431 976 aa19.66■□□□□ 0.74
PRKCSH-205ENST00000587327 CCDC158Q5M9N0 1113 aa19.66■□□□□ 0.74
PRKCSH-205ENST00000587327 GPHNQ9NQX3 736 aaPredicted RBP19.66■□□□□ 0.74
PRKCSH-205ENST00000587327 ZFYP08048 801 aaPredicted RBP19.66■□□□□ 0.74
PRKCSH-205ENST00000587327 ARID5BQ14865 1188 aa19.66■□□□□ 0.74
PRKCSH-205ENST00000587327 ATP2B3Q16720 1220 aa19.66■□□□□ 0.74
PRKCSH-205ENST00000587327 IMMTQ16891 758 aaKnown RBP19.66■□□□□ 0.74
PRKCSH-205ENST00000587327 LINC00301Q8NCQ3 95 aa19.66■□□□□ 0.74
PRKCSH-205ENST00000587327 SDF4Q9BRK5 362 aa19.66■□□□□ 0.74
PRKCSH-205ENST00000587327 TEX13AQ9BXU3 409 aaPredicted RBP19.66■□□□□ 0.74
PRKCSH-205ENST00000587327 DHX16O60231 1041 aaKnown RBP19.65■□□□□ 0.74
PRKCSH-205ENST00000587327 NCBP1Q09161 790 aaKnown RBP19.65■□□□□ 0.74
PRKCSH-205ENST00000587327 FGAP02671 866 aa19.64■□□□□ 0.74
PRKCSH-205ENST00000587327 SKILP12757 684 aa19.64■□□□□ 0.74
PRKCSH-205ENST00000587327 CCDC57Q2TAC2 916 aa19.64■□□□□ 0.74
PRKCSH-205ENST00000587327 ERCC4Q92889 916 aaPredicted RBP19.64■□□□□ 0.74
PRKCSH-205ENST00000587327 A0A1B0GVL5 298 aa19.64■□□□□ 0.73
PRKCSH-205ENST00000587327 NDUFA8P51970 172 aa19.64■□□□□ 0.73
PRKCSH-205ENST00000587327 HAND2P61296 217 aa19.64■□□□□ 0.73
PRKCSH-205ENST00000587327 WASHC4Q2M389 1173 aa19.64■□□□□ 0.73
PRKCSH-205ENST00000587327 TTC39AQ5SRH9 613 aa19.64■□□□□ 0.73
PRKCSH-205ENST00000587327 GORABQ5T7V8 394 aa19.64■□□□□ 0.73
PRKCSH-205ENST00000587327 OTUD7BQ6GQQ9 843 aa19.64■□□□□ 0.73
PRKCSH-205ENST00000587327 AOPEPQ8N6M6 819 aa19.64■□□□□ 0.73
PRKCSH-205ENST00000587327 CCDC112Q8NEF3 446 aa19.64■□□□□ 0.73
PRKCSH-205ENST00000587327 FBXO18Q8NFZ0 1043 aa19.64■□□□□ 0.73
PRKCSH-205ENST00000587327 KCNG4Q8TDN1 519 aa19.64■□□□□ 0.73
PRKCSH-205ENST00000587327 XAGE2Q96GT9 111 aa19.64■□□□□ 0.73
PRKCSH-205ENST00000587327 C8orf76Q96K31 380 aa19.64■□□□□ 0.73
PRKCSH-205ENST00000587327 SLC4A9Q96Q91 983 aa19.64■□□□□ 0.73
PRKCSH-205ENST00000587327 POLR3EQ9NVU0 708 aa19.64■□□□□ 0.73
PRKCSH-205ENST00000587327 PRDM4Q9UKN5 801 aa19.64■□□□□ 0.73
PRKCSH-205ENST00000587327 AKAP2Q9Y2D5 859 aa19.64■□□□□ 0.73
PRKCSH-205ENST00000587327 PRC1O43663 620 aa19.63■□□□□ 0.73
PRKCSH-205ENST00000587327 CBX1P83916 185 aa19.63■□□□□ 0.73
PRKCSH-205ENST00000587327 TRIM28Q13263 835 aaKnown RBP19.63■□□□□ 0.73
PRKCSH-205ENST00000587327 CEP135Q66GS9 1140 aa19.63■□□□□ 0.73
PRKCSH-205ENST00000587327 KIF6Q6ZMV9 814 aa19.63■□□□□ 0.73
PRKCSH-205ENST00000587327 FBXO3Q9UK99 471 aa19.63■□□□□ 0.73
PRKCSH-205ENST00000587327 HPS5Q9UPZ3 1129 aa19.63■□□□□ 0.73
PRKCSH-205ENST00000587327 CLIC4Q9Y696 253 aa19.63■□□□□ 0.73
PRKCSH-205ENST00000587327 CCDC69A6NI79 296 aa19.63■□□□□ 0.73
PRKCSH-205ENST00000587327 YEATS4O95619 227 aa19.63■□□□□ 0.73
PRKCSH-205ENST00000587327 STARD3NLO95772 234 aa19.63■□□□□ 0.73
PRKCSH-205ENST00000587327 ADORA1P30542 326 aa19.63■□□□□ 0.73
PRKCSH-205ENST00000587327 STK38Q15208 465 aa19.63■□□□□ 0.73
PRKCSH-205ENST00000587327 SF3A1Q15459 793 aaKnown RBP19.63■□□□□ 0.73
PRKCSH-205ENST00000587327 FILIP1Q7Z7B0 1213 aa19.63■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 187.7 ms