RNA–Protein interactions for RNA: ENST00000586245.5

VMP1-203, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-203ENST00000586245 USP17L1Q7RTZ2 530 aa16.63■□□□□ 0.25
VMP1-203ENST00000586245 OTUD7AQ8TE49 926 aaPredicted RBP16.63■□□□□ 0.25
VMP1-203ENST00000586245 ATP5JP18859 108 aa16.62■□□□□ 0.25
VMP1-203ENST00000586245 STRIP1Q5VSL9 837 aa16.62■□□□□ 0.25
VMP1-203ENST00000586245 SPATA5Q8NB90 893 aa16.62■□□□□ 0.25
VMP1-203ENST00000586245 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.62■□□□□ 0.25
VMP1-203ENST00000586245 KCNQ5Q9NR82 932 aa16.62■□□□□ 0.25
VMP1-203ENST00000586245 HMG20BQ9P0W2 317 aa16.62■□□□□ 0.25
VMP1-203ENST00000586245 STAP2Q9UGK3 403 aa16.62■□□□□ 0.25
VMP1-203ENST00000586245 FAM205AQ6ZU69 1335 aa16.62■□□□□ 0.25
VMP1-203ENST00000586245 SALL3Q9BXA9 1300 aa16.62■□□□□ 0.25
VMP1-203ENST00000586245 TIAM2Q8IVF5 1701 aa16.62■□□□□ 0.25
VMP1-203ENST00000586245 GLRX3O76003 335 aaKnown RBP16.61■□□□□ 0.25
VMP1-203ENST00000586245 PDE4AP27815 886 aa16.61■□□□□ 0.25
VMP1-203ENST00000586245 MCAMP43121 646 aa16.61■□□□□ 0.25
VMP1-203ENST00000586245 PDE1AP54750 535 aa16.61■□□□□ 0.25
VMP1-203ENST00000586245 CXCL9Q07325 125 aa16.61■□□□□ 0.25
VMP1-203ENST00000586245 SCARF1Q14162 830 aa16.61■□□□□ 0.25
VMP1-203ENST00000586245 TSHZ3Q63HK5 1081 aa16.61■□□□□ 0.25
VMP1-203ENST00000586245 DPY19L2Q6NUT2 758 aa16.61■□□□□ 0.25
VMP1-203ENST00000586245 WDR66Q8TBY9 1149 aa16.61■□□□□ 0.25
VMP1-203ENST00000586245 TBC1D22AQ8WUA7 517 aa16.61■□□□□ 0.25
VMP1-203ENST00000586245 BOLA2Q9H3K6 86 aa16.61■□□□□ 0.25
VMP1-203ENST00000586245 SNRKQ9NRH2 765 aa16.61■□□□□ 0.25
VMP1-203ENST00000586245 JAG2Q9Y219 1238 aa16.61■□□□□ 0.25
VMP1-203ENST00000586245 PDS5AQ29RF7 1337 aaKnown RBP16.61■□□□□ 0.25
VMP1-203ENST00000586245 CHD4Q14839 1912 aa16.6■□□□□ 0.25
VMP1-203ENST00000586245 PSMD14O00487 310 aa16.6■□□□□ 0.25
VMP1-203ENST00000586245 PLEKHM2Q8IWE5 1019 aa16.6■□□□□ 0.25
VMP1-203ENST00000586245 GJA3Q9Y6H8 435 aa16.6■□□□□ 0.25
VMP1-203ENST00000586245 AOX1Q06278 1338 aa16.6■□□□□ 0.25
VMP1-203ENST00000586245 ZNF541Q9H0D2 1346 aa16.6■□□□□ 0.25
VMP1-203ENST00000586245 VIL1P09327 827 aaKnown RBP16.59■□□□□ 0.25
VMP1-203ENST00000586245 ZAP70P43403 619 aa16.59■□□□□ 0.25
VMP1-203ENST00000586245 DACT2Q5SW24 774 aa16.59■□□□□ 0.25
VMP1-203ENST00000586245 RSBN1LQ6PCB5 846 aaPredicted RBP16.59■□□□□ 0.25
VMP1-203ENST00000586245 PI16Q6UXB8 463 aa16.59■□□□□ 0.25
VMP1-203ENST00000586245 GPC2Q8N158 579 aa16.59■□□□□ 0.25
VMP1-203ENST00000586245 ZGPATQ8N5A5 531 aaKnown RBP16.59■□□□□ 0.25
VMP1-203ENST00000586245 DNAJC2Q99543 621 aaKnown RBP16.59■□□□□ 0.25
VMP1-203ENST00000586245 OSBPL3Q9H4L5 887 aa16.59■□□□□ 0.25
VMP1-203ENST00000586245 MYO3BQ8WXR4 1341 aa16.59■□□□□ 0.25
VMP1-203ENST00000586245 COL1A1P02452 1464 aaPredicted RBP16.59■□□□□ 0.25
VMP1-203ENST00000586245 FKBP1AP62942 108 aaKnown RBP16.58■□□□□ 0.24
VMP1-203ENST00000586245 MFSD14BQ5SR56 506 aa16.58■□□□□ 0.24
VMP1-203ENST00000586245 PI4K2BQ8TCG2 481 aa16.58■□□□□ 0.24
VMP1-203ENST00000586245 HAUS7Q99871 368 aa16.58■□□□□ 0.24
VMP1-203ENST00000586245 MYH13Q9UKX3 1938 aa16.58■□□□□ 0.24
VMP1-203ENST00000586245 SCN9AQ15858 1988 aa16.57■□□□□ 0.24
VMP1-203ENST00000586245 SALL1Q9NSC2 1324 aa16.57■□□□□ 0.24
VMP1-203ENST00000586245 RPS12P25398 132 aaKnown RBP16.57■□□□□ 0.24
VMP1-203ENST00000586245 TTF1Q15361 905 aaPredicted RBP16.57■□□□□ 0.24
VMP1-203ENST00000586245 SPTY2D1Q68D10 685 aaPredicted RBP16.57■□□□□ 0.24
VMP1-203ENST00000586245 AGBL3Q8NEM8 1001 aa16.57■□□□□ 0.24
VMP1-203ENST00000586245 ABCF2Q9UG63 623 aa16.57■□□□□ 0.24
VMP1-203ENST00000586245 GLTPD2A6NH11 291 aa16.56■□□□□ 0.24
VMP1-203ENST00000586245 GOLIM4O00461 696 aa16.56■□□□□ 0.24
VMP1-203ENST00000586245 DDNO94850 711 aaPredicted RBP16.56■□□□□ 0.24
VMP1-203ENST00000586245 CYP2E1P05181 493 aaPredicted RBP16.56■□□□□ 0.24
VMP1-203ENST00000586245 RGS3P49796 1198 aa16.56■□□□□ 0.24
VMP1-203ENST00000586245 MXD3Q9BW11 206 aa16.56■□□□□ 0.24
VMP1-203ENST00000586245 PAG1Q9NWQ8 432 aa16.56■□□□□ 0.24
VMP1-203ENST00000586245 SUGT1Q9Y2Z0 365 aa16.56■□□□□ 0.24
VMP1-203ENST00000586245 ZBTB12Q9Y330 459 aaPredicted RBP16.56■□□□□ 0.24
VMP1-203ENST00000586245 NDUFB9Q9Y6M9 179 aa16.56■□□□□ 0.24
VMP1-203ENST00000586245 PSME4Q14997 1843 aa16.56■□□□□ 0.24
VMP1-203ENST00000586245 LDHBP07195 334 aaKnown RBP16.55■□□□□ 0.24
VMP1-203ENST00000586245 GMPSP49915 693 aaPredicted RBP16.55■□□□□ 0.24
VMP1-203ENST00000586245 ERICH6Q7L0X2 663 aa16.55■□□□□ 0.24
VMP1-203ENST00000586245 CERS5Q8N5B7 392 aa16.55■□□□□ 0.24
VMP1-203ENST00000586245 LRP2BPQ9P2M1 347 aa16.55■□□□□ 0.24
VMP1-203ENST00000586245 MAST3O60307 1309 aa16.54■□□□□ 0.24
VMP1-203ENST00000586245 MAP4K4O95819 1239 aaPredicted RBP16.54■□□□□ 0.24
VMP1-203ENST00000586245 TBC1D9Q6ZT07 1266 aa16.54■□□□□ 0.24
VMP1-203ENST00000586245 SKAP1Q86WV1 359 aa16.54■□□□□ 0.24
VMP1-203ENST00000586245 KIAA0825Q8IV33 1275 aa16.54■□□□□ 0.24
VMP1-203ENST00000586245 DPF2Q92785 391 aa16.54■□□□□ 0.24
VMP1-203ENST00000586245 EDC3Q96F86 508 aaKnown RBP16.54■□□□□ 0.24
VMP1-203ENST00000586245 ANTXR1Q9H6X2 564 aa16.54■□□□□ 0.24
VMP1-203ENST00000586245 RAI14Q9P0K7 980 aa16.54■□□□□ 0.24
VMP1-203ENST00000586245 HDAC9Q9UKV0 1011 aa16.54■□□□□ 0.24
VMP1-203ENST00000586245 AKAP11Q9UKA4 1901 aa16.54■□□□□ 0.24
VMP1-203ENST00000586245 TRIM6-TRIM34B2RNG4 842 aa16.53■□□□□ 0.24
VMP1-203ENST00000586245 F8W031 263 aaPredicted RBP16.53■□□□□ 0.24
VMP1-203ENST00000586245 IGSF3O75054 1194 aa16.53■□□□□ 0.24
VMP1-203ENST00000586245 IDH1O75874 414 aaKnown RBP16.53■□□□□ 0.24
VMP1-203ENST00000586245 LMOD1P29536 600 aaPredicted RBP16.53■□□□□ 0.24
VMP1-203ENST00000586245 PRDX5P30044 214 aa16.53■□□□□ 0.24
VMP1-203ENST00000586245 DZIP1Q86YF9 867 aaKnown RBP16.53■□□□□ 0.24
VMP1-203ENST00000586245 OGFOD1Q8N543 542 aa16.53■□□□□ 0.24
VMP1-203ENST00000586245 GMLQ99445 158 aa16.53■□□□□ 0.24
VMP1-203ENST00000586245 PIH1D3Q9NQM4 214 aaKnown RBP16.53■□□□□ 0.24
VMP1-203ENST00000586245 TTF2Q9UNY4 1162 aaKnown RBP16.53■□□□□ 0.24
VMP1-203ENST00000586245 H7C1D1 291 aa16.52■□□□□ 0.24
VMP1-203ENST00000586245 USP17L8P0C7I0 530 aa16.52■□□□□ 0.24
VMP1-203ENST00000586245 MMP14P50281 582 aa16.52■□□□□ 0.24
VMP1-203ENST00000586245 MAP3K12Q12852 859 aa16.52■□□□□ 0.24
VMP1-203ENST00000586245 TTC22Q5TAA0 569 aa16.52■□□□□ 0.24
VMP1-203ENST00000586245 CNTROBQ8N137 903 aa16.52■□□□□ 0.24
VMP1-203ENST00000586245 RILPL2Q969X0 211 aa16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms