RNA–Protein interactions for RNA: ENST00000586134.5

ZNF540-203, Transcript of zinc finger protein 540, humanhuman

TSL 5

Gene ZNF540, Length 2,038 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-203ENST00000586134 NUTM1Q86Y26 1132 aa11.62□□□□□ -0.55
ZNF540-203ENST00000586134 UBXN6Q9BZV1 441 aa11.62□□□□□ -0.55
ZNF540-203ENST00000586134 FAM107BQ9H098 131 aa11.62□□□□□ -0.55
ZNF540-203ENST00000586134 ETAA1Q9NY74 926 aa11.62□□□□□ -0.55
ZNF540-203ENST00000586134 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.62□□□□□ -0.55
ZNF540-203ENST00000586134 ADCY2Q08462 1091 aa11.62□□□□□ -0.55
ZNF540-203ENST00000586134 TSHZ1Q6ZSZ6 1077 aa11.62□□□□□ -0.55
ZNF540-203ENST00000586134 MCM10Q7L590 875 aa11.62□□□□□ -0.55
ZNF540-203ENST00000586134 RPS6KL1Q9Y6S9 549 aa11.62□□□□□ -0.55
ZNF540-203ENST00000586134 ANKRD31Q8N7Z5 1873 aa11.62□□□□□ -0.55
ZNF540-203ENST00000586134 ARFGEF2Q9Y6D5 1785 aa11.61□□□□□ -0.55
ZNF540-203ENST00000586134 EIF3CLB5ME19 914 aaKnown RBP11.61□□□□□ -0.55
ZNF540-203ENST00000586134 PNMA6AP0CW24 399 aaPredicted RBP11.61□□□□□ -0.55
ZNF540-203ENST00000586134 KCNA3P22001 575 aa11.61□□□□□ -0.55
ZNF540-203ENST00000586134 PLA2G4AP47712 749 aa11.61□□□□□ -0.55
ZNF540-203ENST00000586134 NFIXQ14938 502 aa11.61□□□□□ -0.55
ZNF540-203ENST00000586134 DNAAF4Q8WXU2 420 aa11.61□□□□□ -0.55
ZNF540-203ENST00000586134 MIEF2Q96C03 454 aa11.61□□□□□ -0.55
ZNF540-203ENST00000586134 EIF3CQ99613 913 aaKnown RBP11.61□□□□□ -0.55
ZNF540-203ENST00000586134 KIF2CQ99661 725 aa11.61□□□□□ -0.55
ZNF540-203ENST00000586134 KCNF1Q9H3M0 494 aa11.61□□□□□ -0.55
ZNF540-203ENST00000586134 SUDS3Q9H7L9 328 aaPredicted RBP11.61□□□□□ -0.55
ZNF540-203ENST00000586134 MKRN1Q9UHC7 482 aaKnown RBP11.61□□□□□ -0.55
ZNF540-203ENST00000586134 SBF1O95248 1867 aa11.61□□□□□ -0.55
ZNF540-203ENST00000586134 INHBEP58166 350 aa11.6□□□□□ -0.55
ZNF540-203ENST00000586134 TRAF1Q13077 416 aa11.6□□□□□ -0.55
ZNF540-203ENST00000586134 AP1ARQ63HQ0 302 aa11.6□□□□□ -0.55
ZNF540-203ENST00000586134 CLEC4GQ6UXB4 293 aa11.6□□□□□ -0.55
ZNF540-203ENST00000586134 LEKR1Q6ZMV7 388 aa11.6□□□□□ -0.55
ZNF540-203ENST00000586134 ZNF526Q8TF50 670 aaPredicted RBP11.6□□□□□ -0.55
ZNF540-203ENST00000586134 SMARCE1Q969G3 411 aa11.6□□□□□ -0.55
ZNF540-203ENST00000586134 ZSCAN16Q9H4T2 348 aaPredicted RBP11.6□□□□□ -0.55
ZNF540-203ENST00000586134 ARGLU1Q9NWB6 273 aaPredicted RBP11.6□□□□□ -0.55
ZNF540-203ENST00000586134 ANAPC4Q9UJX5 808 aa11.6□□□□□ -0.55
ZNF540-203ENST00000586134 KCNQ3O43525 872 aa11.6□□□□□ -0.55
ZNF540-203ENST00000586134 DPEP1P16444 411 aa11.6□□□□□ -0.55
ZNF540-203ENST00000586134 TATDN2Q93075 761 aa11.6□□□□□ -0.55
ZNF540-203ENST00000586134 FAXDC2Q96IV6 333 aa11.6□□□□□ -0.55
ZNF540-203ENST00000586134 PIM2Q9P1W9 311 aa11.6□□□□□ -0.55
ZNF540-203ENST00000586134 CARMIL3Q8ND23 1372 aa11.6□□□□□ -0.55
ZNF540-203ENST00000586134 SERPINB2P05120 415 aa11.59□□□□□ -0.55
ZNF540-203ENST00000586134 KLHL23Q8NBE8 558 aa11.59□□□□□ -0.55
ZNF540-203ENST00000586134 GIMAP7Q8NHV1 300 aa11.59□□□□□ -0.55
ZNF540-203ENST00000586134 GTF3C6Q969F1 213 aa11.59□□□□□ -0.55
ZNF540-203ENST00000586134 ELP1O95163 1332 aa11.59□□□□□ -0.55
ZNF540-203ENST00000586134 A0A0G2JLW4 131 aa11.59□□□□□ -0.55
ZNF540-203ENST00000586134 CAMTA2O94983 1202 aa11.59□□□□□ -0.55
ZNF540-203ENST00000586134 CCDC186Q7Z3E2 898 aa11.59□□□□□ -0.55
ZNF540-203ENST00000586134 ERC1Q8IUD2 1116 aa11.59□□□□□ -0.55
ZNF540-203ENST00000586134 SH3GL3Q99963 347 aa11.59□□□□□ -0.55
ZNF540-203ENST00000586134 USP16Q9Y5T5 823 aa11.59□□□□□ -0.55
ZNF540-203ENST00000586134 CCDC171Q6TFL3 1326 aa11.58□□□□□ -0.56
ZNF540-203ENST00000586134 ATP10DQ9P241 1426 aa11.58□□□□□ -0.56
ZNF540-203ENST00000586134 NUP98P52948 1817 aa11.58□□□□□ -0.56
ZNF540-203ENST00000586134 UTRNP46939 3433 aa11.58□□□□□ -0.56
ZNF540-203ENST00000586134 A0A087WUV0 522 aaPredicted RBP11.58□□□□□ -0.56
ZNF540-203ENST00000586134 SLU7O95391 586 aaKnown RBP11.58□□□□□ -0.56
ZNF540-203ENST00000586134 A1BGP04217 495 aa11.58□□□□□ -0.56
ZNF540-203ENST00000586134 RWDD2BP57060 319 aa11.58□□□□□ -0.56
ZNF540-203ENST00000586134 ICA1Q05084 483 aa11.58□□□□□ -0.56
ZNF540-203ENST00000586134 DCTN1Q14203 1278 aa11.58□□□□□ -0.56
ZNF540-203ENST00000586134 NAA30Q147X3 362 aaPredicted RBP11.58□□□□□ -0.56
ZNF540-203ENST00000586134 CCDC30Q5VVM6 783 aa11.58□□□□□ -0.56
ZNF540-203ENST00000586134 CEP135Q66GS9 1140 aa11.58□□□□□ -0.56
ZNF540-203ENST00000586134 ZNF428Q96B54 188 aa11.58□□□□□ -0.56
ZNF540-203ENST00000586134 TMCO5BA8MYB1 307 aa11.57□□□□□ -0.56
ZNF540-203ENST00000586134 ZRANB2O95218 330 aaKnown RBP eCLIP11.57□□□□□ -0.56
ZNF540-203ENST00000586134 DALRD3Q5D0E6 543 aaKnown RBP11.57□□□□□ -0.56
ZNF540-203ENST00000586134 TEX11Q8IYF3 940 aa11.57□□□□□ -0.56
ZNF540-203ENST00000586134 GNL3LQ9NVN8 582 aaKnown RBP11.57□□□□□ -0.56
ZNF540-203ENST00000586134 ZNF215Q9UL58 517 aaPredicted RBP11.57□□□□□ -0.56
ZNF540-203ENST00000586134 BCS1LQ9Y276 419 aa11.57□□□□□ -0.56
ZNF540-203ENST00000586134 ZNF652Q9Y2D9 606 aa11.57□□□□□ -0.56
ZNF540-203ENST00000586134 SETSIPP0DME0 302 aa11.57□□□□□ -0.56
ZNF540-203ENST00000586134 EIF4A1P60842 406 aaKnown RBP11.57□□□□□ -0.56
ZNF540-203ENST00000586134 C1QTNF12Q5T7M4 302 aa11.57□□□□□ -0.56
ZNF540-203ENST00000586134 RINLQ6ZS11 566 aa11.57□□□□□ -0.56
ZNF540-203ENST00000586134 DZIP3Q86Y13 1208 aaKnown RBP11.57□□□□□ -0.56
ZNF540-203ENST00000586134 BRIP1Q9BX63 1249 aa11.57□□□□□ -0.56
ZNF540-203ENST00000586134 GIGYF1O75420 1035 aaPredicted RBP11.56□□□□□ -0.56
ZNF540-203ENST00000586134 COL11A2P13942 1736 aaPredicted RBP11.56□□□□□ -0.56
ZNF540-203ENST00000586134 TMPOP42166 694 aaKnown RBP11.56□□□□□ -0.56
ZNF540-203ENST00000586134 ELF2Q15723 593 aa11.56□□□□□ -0.56
ZNF540-203ENST00000586134 WWC2Q6AWC2 1192 aa11.56□□□□□ -0.56
ZNF540-203ENST00000586134 TMCO3Q6UWJ1 677 aa11.56□□□□□ -0.56
ZNF540-203ENST00000586134 FILIP1Q7Z7B0 1213 aa11.56□□□□□ -0.56
ZNF540-203ENST00000586134 C16orf45Q96MC5 204 aaPredicted RBP11.56□□□□□ -0.56
ZNF540-203ENST00000586134 TSPAN18Q96SJ8 248 aa11.56□□□□□ -0.56
ZNF540-203ENST00000586134 DICER1Q9UPY3 1922 aaKnown RBP11.56□□□□□ -0.56
ZNF540-203ENST00000586134 ZC3H4Q9UPT8 1303 aaKnown RBP11.55□□□□□ -0.56
ZNF540-203ENST00000586134 MNAT1P51948 309 aa11.55□□□□□ -0.56
ZNF540-203ENST00000586134 ST5P78524 1137 aa11.55□□□□□ -0.56
ZNF540-203ENST00000586134 NEDD9Q14511 834 aa11.55□□□□□ -0.56
ZNF540-203ENST00000586134 TBC1D9BQ66K14 1250 aa11.55□□□□□ -0.56
ZNF540-203ENST00000586134 TADA2BQ86TJ2 420 aa11.55□□□□□ -0.56
ZNF540-203ENST00000586134 RUNDC1Q96C34 613 aa11.55□□□□□ -0.56
ZNF540-203ENST00000586134 TMX4Q9H1E5 349 aaPredicted RBP11.55□□□□□ -0.56
ZNF540-203ENST00000586134 FOXD4L1Q9NU39 408 aa11.55□□□□□ -0.56
ZNF540-203ENST00000586134 FER1L6Q2WGJ9 1857 aa11.55□□□□□ -0.56
ZNF540-203ENST00000586134 GOLGB1Q14789 3259 aaKnown RBP11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms