RNA–Protein interactions for RNA: ENST00000585799.5

SMARCA4-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 3,842 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-208ENST00000585799 HMGN5P82970 282 aaKnown RBP14.58□□□□□ -0.07
SMARCA4-208ENST00000585799 WWC3Q9ULE0 1092 aa14.58□□□□□ -0.07
SMARCA4-208ENST00000585799 CCDC192P0DO97 292 aa14.58□□□□□ -0.08
SMARCA4-208ENST00000585799 COL9A3Q14050 684 aaPredicted RBP14.58□□□□□ -0.08
SMARCA4-208ENST00000585799 PARP10Q53GL7 1025 aa14.58□□□□□ -0.08
SMARCA4-208ENST00000585799 PRDM1O75626 825 aa14.58□□□□□ -0.08
SMARCA4-208ENST00000585799 MCAMP43121 646 aa14.58□□□□□ -0.08
SMARCA4-208ENST00000585799 METAP2P50579 478 aaKnown RBP eCLIP14.58□□□□□ -0.081e-7■■□□□ 12.9
SMARCA4-208ENST00000585799 MAP3K11Q16584 847 aa14.58□□□□□ -0.08
SMARCA4-208ENST00000585799 MFSD6Q6ZSS7 791 aa14.58□□□□□ -0.08
SMARCA4-208ENST00000585799 FAM43AQ8N2R8 423 aa14.58□□□□□ -0.08
SMARCA4-208ENST00000585799 SPATA5Q8NB90 893 aa14.58□□□□□ -0.08
SMARCA4-208ENST00000585799 BCL11BQ9C0K0 894 aaPredicted RBP14.58□□□□□ -0.08
SMARCA4-208ENST00000585799 SLC12A7Q9Y666 1083 aa14.58□□□□□ -0.08
SMARCA4-208ENST00000585799 EPB41L2O43491 1005 aaKnown RBP14.57□□□□□ -0.08
SMARCA4-208ENST00000585799 CIAO1O76071 339 aa14.57□□□□□ -0.08
SMARCA4-208ENST00000585799 PALLDQ8WX93 1383 aa14.57□□□□□ -0.08
SMARCA4-208ENST00000585799 PDE6AP16499 860 aa14.57□□□□□ -0.08
SMARCA4-208ENST00000585799 RASSF8Q8NHQ8 419 aa14.57□□□□□ -0.08
SMARCA4-208ENST00000585799 SLC4A9Q96Q91 983 aa14.57□□□□□ -0.08
SMARCA4-208ENST00000585799 TRIM5Q9C035 493 aa14.57□□□□□ -0.08
SMARCA4-208ENST00000585799 USP42Q9H9J4 1324 aaKnown RBP14.57□□□□□ -0.08
SMARCA4-208ENST00000585799 ADAMTSL3P82987 1691 aa14.57□□□□□ -0.08
SMARCA4-208ENST00000585799 ERFEQ4G0M1 354 aa14.57□□□□□ -0.08
SMARCA4-208ENST00000585799 DZIP1Q86YF9 867 aaKnown RBP14.57□□□□□ -0.08
SMARCA4-208ENST00000585799 SLC26A6Q9BXS9 759 aa14.57□□□□□ -0.08
SMARCA4-208ENST00000585799 MED1Q15648 1581 aaPredicted RBP14.57□□□□□ -0.08
SMARCA4-208ENST00000585799 RGPD2P0DJD1 1756 aa14.56□□□□□ -0.08
SMARCA4-208ENST00000585799 AK9Q5TCS8 1911 aa14.56□□□□□ -0.08
SMARCA4-208ENST00000585799 DDIT3P35638 169 aa14.56□□□□□ -0.08
SMARCA4-208ENST00000585799 TPTE2Q6XPS3 522 aa14.56□□□□□ -0.08
SMARCA4-208ENST00000585799 PIH1D3Q9NQM4 214 aaKnown RBP14.56□□□□□ -0.08
SMARCA4-208ENST00000585799 CASP7P55210 303 aa14.56□□□□□ -0.08
SMARCA4-208ENST00000585799 ITPK1Q13572 414 aa14.56□□□□□ -0.08
SMARCA4-208ENST00000585799 DSCC1Q9BVC3 393 aa14.56□□□□□ -0.08
SMARCA4-208ENST00000585799 INCENPQ9NQS7 918 aa14.56□□□□□ -0.08
SMARCA4-208ENST00000585799 CHRNDQ07001 517 aa14.56□□□□□ -0.08
SMARCA4-208ENST00000585799 TRIM22Q8IYM9 498 aa14.56□□□□□ -0.08
SMARCA4-208ENST00000585799 GPR108Q9NPR9 543 aa14.56□□□□□ -0.08
SMARCA4-208ENST00000585799 C6orf229H3BNL8 230 aa14.55□□□□□ -0.08
SMARCA4-208ENST00000585799 ISM2Q6H9L7 571 aa14.55□□□□□ -0.08
SMARCA4-208ENST00000585799 NAA16Q6N069 864 aaPredicted RBP14.55□□□□□ -0.08
SMARCA4-208ENST00000585799 TULP1O00294 542 aaPredicted RBP14.55□□□□□ -0.08
SMARCA4-208ENST00000585799 SCRN1Q12765 414 aa14.55□□□□□ -0.08
SMARCA4-208ENST00000585799 TOB2Q14106 344 aaPredicted RBP14.55□□□□□ -0.08
SMARCA4-208ENST00000585799 AMOTL1Q8IY63 956 aa14.55□□□□□ -0.08
SMARCA4-208ENST00000585799 FSIP1Q8NA03 581 aa14.55□□□□□ -0.08
SMARCA4-208ENST00000585799 RPGRQ92834 1020 aaKnown RBP14.55□□□□□ -0.08
SMARCA4-208ENST00000585799 GTF3C6Q969F1 213 aa14.55□□□□□ -0.08
SMARCA4-208ENST00000585799 SLIT3O75094 1523 aa14.55□□□□□ -0.08
SMARCA4-208ENST00000585799 LETM1O95202 739 aaPredicted RBP14.55□□□□□ -0.08
SMARCA4-208ENST00000585799 IARSP41252 1262 aaKnown RBP14.55□□□□□ -0.08
SMARCA4-208ENST00000585799 LRP10Q7Z4F1 713 aa14.55□□□□□ -0.08
SMARCA4-208ENST00000585799 ZNF830Q96NB3 372 aaPredicted RBP14.55□□□□□ -0.08
SMARCA4-208ENST00000585799 NCOA3Q9Y6Q9 1424 aa14.55□□□□□ -0.08
SMARCA4-208ENST00000585799 ZBTB43O43298 467 aa14.54□□□□□ -0.08
SMARCA4-208ENST00000585799 PRKAB2O43741 272 aa14.54□□□□□ -0.08
SMARCA4-208ENST00000585799 SDR42E1Q8WUS8 393 aa14.54□□□□□ -0.08
SMARCA4-208ENST00000585799 PHKBQ93100 1093 aa14.54□□□□□ -0.08
SMARCA4-208ENST00000585799 BIN1O00499 593 aa14.54□□□□□ -0.08
SMARCA4-208ENST00000585799 USP5P45974 858 aa14.54□□□□□ -0.08
SMARCA4-208ENST00000585799 STOX1Q6ZVD7 989 aa14.54□□□□□ -0.08
SMARCA4-208ENST00000585799 ALG1Q9BT22 464 aa14.54□□□□□ -0.08
SMARCA4-208ENST00000585799 ZNF609O15014 1411 aa14.54□□□□□ -0.08
SMARCA4-208ENST00000585799 MARCKSP29966 332 aaPredicted RBP14.54□□□□□ -0.08
SMARCA4-208ENST00000585799 RRAGDQ9NQL2 400 aaPredicted RBP14.54□□□□□ -0.08
SMARCA4-208ENST00000585799 CYP2E1P05181 493 aaPredicted RBP14.53□□□□□ -0.08
SMARCA4-208ENST00000585799 TTC6Q86TZ1 520 aa14.53□□□□□ -0.08
SMARCA4-208ENST00000585799 CCAR1Q8IX12 1150 aaKnown RBP14.53□□□□□ -0.08
SMARCA4-208ENST00000585799 FTOQ9C0B1 505 aaKnown RBP eCLIP14.53□□□□□ -0.08
SMARCA4-208ENST00000585799 RGPD1P0DJD0 1748 aa14.53□□□□□ -0.08
SMARCA4-208ENST00000585799 CMTR1Q8N1G2 835 aaKnown RBP14.53□□□□□ -0.08
SMARCA4-208ENST00000585799 MROH5Q6ZUA9 1318 aa14.53□□□□□ -0.08
SMARCA4-208ENST00000585799 FSD2A1L4K1 749 aa14.53□□□□□ -0.08
SMARCA4-208ENST00000585799 ADD1P35611 737 aaKnown RBP14.53□□□□□ -0.08
SMARCA4-208ENST00000585799 TRIM28Q13263 835 aaKnown RBP14.53□□□□□ -0.08
SMARCA4-208ENST00000585799 TRAPPC3LQ5T215 181 aa14.53□□□□□ -0.08
SMARCA4-208ENST00000585799 ERCC4Q92889 916 aaPredicted RBP14.53□□□□□ -0.08
SMARCA4-208ENST00000585799 GJB4Q9NTQ9 266 aa14.53□□□□□ -0.08
SMARCA4-208ENST00000585799 MAGEB6P1A0A0J9YX57 407 aa14.52□□□□□ -0.08
SMARCA4-208ENST00000585799 ERVV-1B6SEH8 477 aa14.52□□□□□ -0.08
SMARCA4-208ENST00000585799 RASGRF1Q13972 1273 aa14.52□□□□□ -0.08
SMARCA4-208ENST00000585799 RIPOR2Q9Y4F9 1068 aa14.52□□□□□ -0.08
SMARCA4-208ENST00000585799 SPATA31A1Q5TZJ5 1347 aa14.52□□□□□ -0.08
SMARCA4-208ENST00000585799 F8W031 263 aaPredicted RBP14.52□□□□□ -0.09
SMARCA4-208ENST00000585799 CDKL5O76039 1030 aa14.52□□□□□ -0.09
SMARCA4-208ENST00000585799 LIG1P18858 919 aa14.52□□□□□ -0.09
SMARCA4-208ENST00000585799 ATP2B2Q01814 1243 aa14.52□□□□□ -0.09
SMARCA4-208ENST00000585799 R3HCC1Q9Y3T6 440 aaKnown RBP14.52□□□□□ -0.09
SMARCA4-208ENST00000585799 hCG_1642624A0A1W2PR95 340 aa14.52□□□□□ -0.09
SMARCA4-208ENST00000585799 WTAPQ15007 396 aa14.52□□□□□ -0.09
SMARCA4-208ENST00000585799 SAMD1Q6SPF0 538 aaPredicted RBP14.52□□□□□ -0.09
SMARCA4-208ENST00000585799 UBN2Q6ZU65 1347 aa14.51□□□□□ -0.09
SMARCA4-208ENST00000585799 GOLGA6L6A8MZA4 724 aa14.51□□□□□ -0.09
SMARCA4-208ENST00000585799 EIF5P55010 431 aaKnown RBP14.51□□□□□ -0.09
SMARCA4-208ENST00000585799 RPS8P62241 208 aaKnown RBP14.51□□□□□ -0.09
SMARCA4-208ENST00000585799 CCDC39Q9UFE4 941 aa14.51□□□□□ -0.09
SMARCA4-208ENST00000585799 ADCY5O95622 1261 aa14.5□□□□□ -0.09
SMARCA4-208ENST00000585799 PDIA3P30101 505 aaKnown RBP14.5□□□□□ -0.09
SMARCA4-208ENST00000585799 ZNF445P59923 1031 aa14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms