RNA–Protein interactions for RNA: ENST00000585400.1

NPHS1-203, Transcript of NPHS1, nephrin, humanhuman

TSL 1 (best)

Gene NPHS1, Length 999 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHS1-203ENST00000585400 ZNF646O15015 1829 aaPredicted RBP27.83■■■□□ 2.05
NPHS1-203ENST00000585400 FRAT2O75474 233 aaPredicted RBP27.81■■■□□ 2.04
NPHS1-203ENST00000585400 SURF6O75683 361 aaKnown RBP27.81■■■□□ 2.04
NPHS1-203ENST00000585400 OS9Q13438 667 aaPredicted RBP27.81■■■□□ 2.04
NPHS1-203ENST00000585400 KIF4BQ2VIQ3 1234 aa27.81■■■□□ 2.04
NPHS1-203ENST00000585400 CNTROBQ8N137 903 aa27.81■■■□□ 2.04
NPHS1-203ENST00000585400 CERS5Q8N5B7 392 aa27.81■■■□□ 2.04
NPHS1-203ENST00000585400 AKAP2Q9Y2D5 859 aa27.81■■■□□ 2.04
NPHS1-203ENST00000585400 FAM205AQ6ZU69 1335 aa27.81■■■□□ 2.04
NPHS1-203ENST00000585400 KIAA0825Q8IV33 1275 aa27.8■■■□□ 2.04
NPHS1-203ENST00000585400 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP27.8■■■□□ 2.04
NPHS1-203ENST00000585400 TIMM10P62072 90 aa27.79■■■□□ 2.04
NPHS1-203ENST00000585400 CHAF1AQ13111 956 aaPredicted RBP27.79■■■□□ 2.04
NPHS1-203ENST00000585400 OGFOD1Q8N543 542 aa27.79■■■□□ 2.04
NPHS1-203ENST00000585400 ZC3H15Q8WU90 426 aaKnown RBP27.79■■■□□ 2.04
NPHS1-203ENST00000585400 MYOZ2Q9NPC6 264 aa27.79■■■□□ 2.04
NPHS1-203ENST00000585400 ITGBL1O95965 494 aaPredicted RBP27.78■■■□□ 2.04
NPHS1-203ENST00000585400 ADORA1P30542 326 aa27.78■■■□□ 2.04
NPHS1-203ENST00000585400 FKBP1AP62942 108 aaKnown RBP27.78■■■□□ 2.04
NPHS1-203ENST00000585400 RPAP2Q8IXW5 612 aaPredicted RBP27.78■■■□□ 2.04
NPHS1-203ENST00000585400 NOP58Q9Y2X3 529 aaKnown RBP27.78■■■□□ 2.04
NPHS1-203ENST00000585400 A0A1B0GUL7 405 aa27.77■■■□□ 2.04
NPHS1-203ENST00000585400 MFSD14BQ5SR56 506 aa27.77■■■□□ 2.04
NPHS1-203ENST00000585400 PGAP2Q9UHJ9 254 aa27.77■■■□□ 2.04
NPHS1-203ENST00000585400 HDAC9Q9UKV0 1011 aa27.77■■■□□ 2.04
NPHS1-203ENST00000585400 F8W031 263 aaPredicted RBP27.76■■■□□ 2.03
NPHS1-203ENST00000585400 NEUROD6Q96NK8 337 aa27.76■■■□□ 2.03
NPHS1-203ENST00000585400 PHKA1P46020 1223 aa27.75■■■□□ 2.03
NPHS1-203ENST00000585400 SIRT2Q8IXJ6 389 aa27.75■■■□□ 2.03
NPHS1-203ENST00000585400 XAGE2Q96GT9 111 aa27.75■■■□□ 2.03
NPHS1-203ENST00000585400 GNL3LQ9NVN8 582 aaKnown RBP27.75■■■□□ 2.03
NPHS1-203ENST00000585400 PASKQ96RG2 1323 aa27.74■■■□□ 2.03
NPHS1-203ENST00000585400 HMMRO75330 724 aa27.74■■■□□ 2.03
NPHS1-203ENST00000585400 MMP14P50281 582 aa27.74■■■□□ 2.03
NPHS1-203ENST00000585400 ASTN2O75129 1339 aaPredicted RBP27.73■■■□□ 2.03
NPHS1-203ENST00000585400 SCARF1Q14162 830 aa27.73■■■□□ 2.03
NPHS1-203ENST00000585400 CCDC102BQ68D86 513 aa27.73■■■□□ 2.03
NPHS1-203ENST00000585400 GLIS2Q9BZE0 524 aaPredicted RBP27.73■■■□□ 2.03
NPHS1-203ENST00000585400 CREBZFQ9NS37 354 aa27.73■■■□□ 2.03
NPHS1-203ENST00000585400 EXOC6BQ9Y2D4 811 aa27.73■■■□□ 2.03
NPHS1-203ENST00000585400 JMYQ8N9B5 988 aa27.72■■■□□ 2.03
NPHS1-203ENST00000585400 TBC1D22AQ8WUA7 517 aa27.72■■■□□ 2.03
NPHS1-203ENST00000585400 GGA3Q9NZ52 723 aa27.72■■■□□ 2.03
NPHS1-203ENST00000585400 TRAF5O00463 557 aa27.71■■■□□ 2.03
NPHS1-203ENST00000585400 ARAP2Q8WZ64 1704 aa27.71■■■□□ 2.03
NPHS1-203ENST00000585400 DCPSQ96C86 337 aaKnown RBP27.71■■■□□ 2.03
NPHS1-203ENST00000585400 GPR108Q9NPR9 543 aa27.71■■■□□ 2.03
NPHS1-203ENST00000585400 MKRN1Q9UHC7 482 aaKnown RBP27.71■■■□□ 2.03
NPHS1-203ENST00000585400 FMR1Q06787 632 aaKnown RBP eCLIP27.7■■■□□ 2.02
NPHS1-203ENST00000585400 NBPF9Q3BBW0 867 aa27.7■■■□□ 2.02
NPHS1-203ENST00000585400 TNNI3KQ59H18 835 aa27.7■■■□□ 2.02
NPHS1-203ENST00000585400 GORABQ5T7V8 394 aa27.7■■■□□ 2.02
NPHS1-203ENST00000585400 CDC37L1Q7L3B6 337 aa27.7■■■□□ 2.02
NPHS1-203ENST00000585400 FPGT-TNNI3KV9GXZ4 949 aa27.7■■■□□ 2.02
NPHS1-203ENST00000585400 COL1A1P02452 1464 aaPredicted RBP27.7■■■□□ 2.02
NPHS1-203ENST00000585400 WNT10BO00744 389 aa27.69■■■□□ 2.02
NPHS1-203ENST00000585400 GRIK5Q16478 980 aa27.69■■■□□ 2.02
NPHS1-203ENST00000585400 HSP90AB4PQ58FF6 505 aa27.69■■■□□ 2.02
NPHS1-203ENST00000585400 ANGEL2Q5VTE6 544 aaKnown RBP27.69■■■□□ 2.02
NPHS1-203ENST00000585400 USP48Q86UV5 1035 aa27.69■■■□□ 2.02
NPHS1-203ENST00000585400 ERC1Q8IUD2 1116 aa27.69■■■□□ 2.02
NPHS1-203ENST00000585400 CRBNQ96SW2 442 aa27.69■■■□□ 2.02
NPHS1-203ENST00000585400 TTF2Q9UNY4 1162 aaKnown RBP27.69■■■□□ 2.02
NPHS1-203ENST00000585400 DLGAP5Q15398 846 aa27.68■■■□□ 2.02
NPHS1-203ENST00000585400 KRT26Q7Z3Y9 468 aa27.68■■■□□ 2.02
NPHS1-203ENST00000585400 WDR66Q8TBY9 1149 aa27.68■■■□□ 2.02
NPHS1-203ENST00000585400 DENND2AQ9ULE3 1009 aa27.68■■■□□ 2.02
NPHS1-203ENST00000585400 SEMA3EO15041 775 aa27.67■■■□□ 2.02
NPHS1-203ENST00000585400 CFAP100Q494V2 611 aa27.67■■■□□ 2.02
NPHS1-203ENST00000585400 TMEM88BA6NKF7 163 aa27.66■■■□□ 2.02
NPHS1-203ENST00000585400 ADM5C9JUS6 153 aa27.66■■■□□ 2.02
NPHS1-203ENST00000585400 SULF1Q8IWU6 871 aa27.66■■■□□ 2.02
NPHS1-203ENST00000585400 ZBED3Q96IU2 234 aaPredicted RBP27.66■■■□□ 2.02
NPHS1-203ENST00000585400 PCDHAC2Q9Y5I4 1007 aa27.66■■■□□ 2.02
NPHS1-203ENST00000585400 APBB1O00213 710 aa27.65■■■□□ 2.02
NPHS1-203ENST00000585400 RBM5P52756 815 aaKnown RBP eCLIP27.65■■■□□ 2.02
NPHS1-203ENST00000585400 RASGRF1Q13972 1273 aa27.65■■■□□ 2.02
NPHS1-203ENST00000585400 MTMR14Q8NCE2 650 aa27.65■■■□□ 2.02
NPHS1-203ENST00000585400 DBNDD2Q9BQY9 259 aa27.65■■■□□ 2.02
NPHS1-203ENST00000585400 DLK2Q6UY11 383 aa27.64■■■□□ 2.02
NPHS1-203ENST00000585400 RHPN1Q8TCX5 695 aa27.64■■■□□ 2.02
NPHS1-203ENST00000585400 PITPNM2Q9BZ72 1349 aa27.64■■■□□ 2.01
NPHS1-203ENST00000585400 ZBTB22O15209 634 aa27.63■■■□□ 2.01
NPHS1-203ENST00000585400 EAF2Q96CJ1 260 aaPredicted RBP27.63■■■□□ 2.01
NPHS1-203ENST00000585400 CCDC8Q9H0W5 538 aaPredicted RBP27.63■■■□□ 2.01
NPHS1-203ENST00000585400 SERPINA10Q9UK55 444 aa27.63■■■□□ 2.01
NPHS1-203ENST00000585400 SUGT1Q9Y2Z0 365 aa27.63■■■□□ 2.01
NPHS1-203ENST00000585400 SUPT16HQ9Y5B9 1047 aaKnown RBP27.63■■■□□ 2.01
NPHS1-203ENST00000585400 PCNTO95613 3336 aa27.62■■■□□ 2.01
NPHS1-203ENST00000585400 SPDYE2BA6NHP3 402 aa27.62■■■□□ 2.01
NPHS1-203ENST00000585400 SPDYE6P0CI01 402 aa27.62■■■□□ 2.01
NPHS1-203ENST00000585400 ZNF408Q9H9D4 720 aa27.62■■■□□ 2.01
NPHS1-203ENST00000585400 IL1RAPL2Q9NP60 686 aa27.62■■■□□ 2.01
NPHS1-203ENST00000585400 SCAF8Q9UPN6 1271 aaKnown RBP27.62■■■□□ 2.01
NPHS1-203ENST00000585400 MYH13Q9UKX3 1938 aa27.62■■■□□ 2.01
NPHS1-203ENST00000585400 CNTNAP1P78357 1384 aa27.61■■■□□ 2.01
NPHS1-203ENST00000585400 RAB11FIP3O75154 756 aa27.61■■■□□ 2.01
NPHS1-203ENST00000585400 HSPA1AP0DMV8 641 aaKnown RBP27.61■■■□□ 2.01
NPHS1-203ENST00000585400 HSPA1BP0DMV9 641 aaKnown RBP27.61■■■□□ 2.01
NPHS1-203ENST00000585400 CRKP46108 304 aa27.61■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms