RNA–Protein interactions for RNA: ENST00000585098.5

NDEL1-219, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

TSL 3 BASIC

Gene NDEL1, Length 454 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-219ENST00000585098 KLRG1Q96E93 195 aa29.41■■■□□ 2.3
NDEL1-219ENST00000585098 ASTN2O75129 1339 aaPredicted RBP29.41■■■□□ 2.3
NDEL1-219ENST00000585098 BCAMP50895 628 aa29.4■■■□□ 2.3
NDEL1-219ENST00000585098 FKBP1AP62942 108 aaKnown RBP29.4■■■□□ 2.3
NDEL1-219ENST00000585098 USP48Q86UV5 1035 aa29.4■■■□□ 2.3
NDEL1-219ENST00000585098 GGA3Q9NZ52 723 aa29.4■■■□□ 2.3
NDEL1-219ENST00000585098 HDAC9Q9UKV0 1011 aa29.4■■■□□ 2.3
NDEL1-219ENST00000585098 IQSEC3Q9UPP2 1182 aaPredicted RBP29.4■■■□□ 2.3
NDEL1-219ENST00000585098 FAM205AQ6ZU69 1335 aa29.4■■■□□ 2.3
NDEL1-219ENST00000585098 MMP14P50281 582 aa29.39■■■□□ 2.3
NDEL1-219ENST00000585098 ATP2B3Q16720 1220 aa29.39■■■□□ 2.3
NDEL1-219ENST00000585098 KRT26Q7Z3Y9 468 aa29.38■■■□□ 2.29
NDEL1-219ENST00000585098 F8W031 263 aaPredicted RBP29.37■■■□□ 2.29
NDEL1-219ENST00000585098 FRAT2O75474 233 aaPredicted RBP29.37■■■□□ 2.29
NDEL1-219ENST00000585098 ATP8B2P98198 1209 aa29.37■■■□□ 2.29
NDEL1-219ENST00000585098 ANGEL2Q5VTE6 544 aaKnown RBP29.37■■■□□ 2.29
NDEL1-219ENST00000585098 NBPF9Q3BBW0 867 aa29.36■■■□□ 2.29
NDEL1-219ENST00000585098 MFSD14BQ5SR56 506 aa29.36■■■□□ 2.29
NDEL1-219ENST00000585098 CST9Q5W186 159 aa29.36■■■□□ 2.29
NDEL1-219ENST00000585098 DLK2Q6UY11 383 aa29.36■■■□□ 2.29
NDEL1-219ENST00000585098 ADM5C9JUS6 153 aa29.35■■■□□ 2.29
NDEL1-219ENST00000585098 CHAF1AQ13111 956 aaPredicted RBP29.35■■■□□ 2.29
NDEL1-219ENST00000585098 POLA2Q14181 598 aa29.35■■■□□ 2.29
NDEL1-219ENST00000585098 MVPQ14764 893 aaKnown RBP29.35■■■□□ 2.29
NDEL1-219ENST00000585098 MKRN1Q9UHC7 482 aaKnown RBP29.35■■■□□ 2.29
NDEL1-219ENST00000585098 COG6Q9Y2V7 657 aa29.35■■■□□ 2.29
NDEL1-219ENST00000585098 WNT10BO00744 389 aa29.34■■■□□ 2.29
NDEL1-219ENST00000585098 CELF2O95319 508 aaKnown RBP29.34■■■□□ 2.29
NDEL1-219ENST00000585098 TFCP2Q12800 502 aa29.34■■■□□ 2.29
NDEL1-219ENST00000585098 SULF1Q8IWU6 871 aa29.34■■■□□ 2.29
NDEL1-219ENST00000585098 SSH3Q8TE77 659 aa29.34■■■□□ 2.29
NDEL1-219ENST00000585098 ZNF408Q9H9D4 720 aa29.34■■■□□ 2.29
NDEL1-219ENST00000585098 G3BP1Q13283 466 aaKnown RBP eCLIP29.33■■■□□ 2.29
NDEL1-219ENST00000585098 GOLGA6L2Q8N9W4 650 aaPredicted RBP29.33■■■□□ 2.29
NDEL1-219ENST00000585098 ABT1Q9ULW3 272 aaKnown RBP29.33■■■□□ 2.29
NDEL1-219ENST00000585098 DDX19BQ9UMR2 479 aa29.32■■■□□ 2.28
NDEL1-219ENST00000585098 PITPNM2Q9BZ72 1349 aa29.31■■■□□ 2.28
NDEL1-219ENST00000585098 TIMM10P62072 90 aa29.31■■■□□ 2.28
NDEL1-219ENST00000585098 DLGAP5Q15398 846 aa29.31■■■□□ 2.28
NDEL1-219ENST00000585098 AKAP2Q9Y2D5 859 aa29.31■■■□□ 2.28
NDEL1-219ENST00000585098 CNTNAP1P78357 1384 aa29.3■■■□□ 2.28
NDEL1-219ENST00000585098 ADORA1P30542 326 aa29.3■■■□□ 2.28
NDEL1-219ENST00000585098 CEP85Q6P2H3 762 aa29.3■■■□□ 2.28
NDEL1-219ENST00000585098 ZBED3Q96IU2 234 aaPredicted RBP29.3■■■□□ 2.28
NDEL1-219ENST00000585098 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP29.3■■■□□ 2.28
NDEL1-219ENST00000585098 A0A1B0GUL7 405 aa29.29■■■□□ 2.28
NDEL1-219ENST00000585098 PDE3AQ14432 1141 aa29.29■■■□□ 2.28
NDEL1-219ENST00000585098 C20orf194Q5TEA3 1177 aa29.29■■■□□ 2.28
NDEL1-219ENST00000585098 MTMR14Q8NCE2 650 aa29.29■■■□□ 2.28
NDEL1-219ENST00000585098 TBC1D22AQ8WUA7 517 aa29.29■■■□□ 2.28
NDEL1-219ENST00000585098 TTF2Q9UNY4 1162 aaKnown RBP29.29■■■□□ 2.28
NDEL1-219ENST00000585098 SCAF8Q9UPN6 1271 aaKnown RBP29.29■■■□□ 2.28
NDEL1-219ENST00000585098 GRIK5Q16478 980 aa29.28■■■□□ 2.28
NDEL1-219ENST00000585098 CFAP100Q494V2 611 aa29.28■■■□□ 2.28
NDEL1-219ENST00000585098 GNL3LQ9NVN8 582 aaKnown RBP29.28■■■□□ 2.28
NDEL1-219ENST00000585098 PCDHAC2Q9Y5I4 1007 aa29.28■■■□□ 2.28
NDEL1-219ENST00000585098 TRPM7Q96QT4 1865 aa29.27■■■□□ 2.28
NDEL1-219ENST00000585098 RASSF10A6NK89 507 aa29.27■■■□□ 2.28
NDEL1-219ENST00000585098 SURF6O75683 361 aaKnown RBP29.27■■■□□ 2.28
NDEL1-219ENST00000585098 PHKA1P46020 1223 aa29.27■■■□□ 2.28
NDEL1-219ENST00000585098 DEFB115Q30KQ5 88 aa29.27■■■□□ 2.28
NDEL1-219ENST00000585098 JMYQ8N9B5 988 aa29.27■■■□□ 2.28
NDEL1-219ENST00000585098 TLL2Q9Y6L7 1015 aa29.27■■■□□ 2.28
NDEL1-219ENST00000585098 RBM5P52756 815 aaKnown RBP eCLIP29.26■■■□□ 2.27
NDEL1-219ENST00000585098 OS9Q13438 667 aaPredicted RBP29.26■■■□□ 2.27
NDEL1-219ENST00000585098 CDCA5Q96FF9 252 aa29.26■■■□□ 2.27
NDEL1-219ENST00000585098 ZBTB40Q9NUA8 1239 aa29.26■■■□□ 2.27
NDEL1-219ENST00000585098 POLR2AP24928 1970 aaKnown RBP29.26■■■□□ 2.27
NDEL1-219ENST00000585098 SPDYE2BA6NHP3 402 aa29.25■■■□□ 2.27
NDEL1-219ENST00000585098 SPDYE6P0CI01 402 aa29.25■■■□□ 2.27
NDEL1-219ENST00000585098 CCDC102BQ68D86 513 aa29.25■■■□□ 2.27
NDEL1-219ENST00000585098 XAGE2Q96GT9 111 aa29.25■■■□□ 2.27
NDEL1-219ENST00000585098 NEUROD6Q96NK8 337 aa29.25■■■□□ 2.27
NDEL1-219ENST00000585098 WDR66Q8TBY9 1149 aa29.24■■■□□ 2.27
NDEL1-219ENST00000585098 PRMT6Q96LA8 375 aaPredicted RBP29.24■■■□□ 2.27
NDEL1-219ENST00000585098 CHMP4BQ9H444 224 aaKnown RBP29.24■■■□□ 2.27
NDEL1-219ENST00000585098 SERPINA10Q9UK55 444 aa29.24■■■□□ 2.27
NDEL1-219ENST00000585098 COL1A1P02452 1464 aaPredicted RBP29.23■■■□□ 2.27
NDEL1-219ENST00000585098 VEGFBP49765 207 aa29.23■■■□□ 2.27
NDEL1-219ENST00000585098 SAPCD2Q86UD0 394 aa29.23■■■□□ 2.27
NDEL1-219ENST00000585098 APOBEC3FQ8IUX4 373 aaKnown RBP29.23■■■□□ 2.27
NDEL1-219ENST00000585098 NOP58Q9Y2X3 529 aaKnown RBP29.23■■■□□ 2.27
NDEL1-219ENST00000585098 SEMA3EO15041 775 aa29.22■■■□□ 2.27
NDEL1-219ENST00000585098 MYO1BO43795 1136 aa29.22■■■□□ 2.27
NDEL1-219ENST00000585098 DENND2AQ9ULE3 1009 aa29.22■■■□□ 2.27
NDEL1-219ENST00000585098 ARAP2Q8WZ64 1704 aa29.22■■■□□ 2.27
NDEL1-219ENST00000585098 CRKP46108 304 aa29.21■■■□□ 2.27
NDEL1-219ENST00000585098 PAXIP1Q6ZW49 1069 aaPredicted RBP29.21■■■□□ 2.27
NDEL1-219ENST00000585098 GBA2Q9HCG7 927 aaPredicted RBP29.21■■■□□ 2.27
NDEL1-219ENST00000585098 SUGT1Q9Y2Z0 365 aa29.21■■■□□ 2.27
NDEL1-219ENST00000585098 CLRN2A0PK11 232 aa29.2■■■□□ 2.26
NDEL1-219ENST00000585098 PRAMEF18Q5VWM3 479 aa29.2■■■□□ 2.26
NDEL1-219ENST00000585098 C2orf69Q8N8R5 385 aa29.2■■■□□ 2.26
NDEL1-219ENST00000585098 AOX1Q06278 1338 aa29.2■■■□□ 2.26
NDEL1-219ENST00000585098 GORABQ5T7V8 394 aa29.19■■■□□ 2.26
NDEL1-219ENST00000585098 RPAP2Q8IXW5 612 aaPredicted RBP29.19■■■□□ 2.26
NDEL1-219ENST00000585098 GPR108Q9NPR9 543 aa29.19■■■□□ 2.26
NDEL1-219ENST00000585098 ZBTB22O15209 634 aa29.18■■■□□ 2.26
NDEL1-219ENST00000585098 HDLBPQ00341 1268 aaKnown RBP29.18■■■□□ 2.26
NDEL1-219ENST00000585098 RASGRF1Q13972 1273 aa29.18■■■□□ 2.26
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms