RNA–Protein interactions for RNA: ENST00000585026.1

CSNK1D-226, Transcript of casein kinase 1 delta, humanhuman

TSL 5

Gene CSNK1D, Length 563 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-226ENST00000585026 C15orf52Q6ZUT6 534 aaKnown RBP13.64□□□□□ -0.23
CSNK1D-226ENST00000585026 MTMR14Q8NCE2 650 aa13.64□□□□□ -0.23
CSNK1D-226ENST00000585026 ZBED3Q96IU2 234 aaPredicted RBP13.64□□□□□ -0.23
CSNK1D-226ENST00000585026 PSME4Q14997 1843 aa13.64□□□□□ -0.23
CSNK1D-226ENST00000585026 FKBP1AP62942 108 aaKnown RBP13.63□□□□□ -0.23
CSNK1D-226ENST00000585026 NCBP3Q53F19 620 aaKnown RBP13.63□□□□□ -0.23
CSNK1D-226ENST00000585026 INTS3Q68E01 1043 aaKnown RBP13.63□□□□□ -0.23
CSNK1D-226ENST00000585026 G2E3Q7L622 706 aa13.63□□□□□ -0.23
CSNK1D-226ENST00000585026 WWC1Q8IX03 1113 aa13.63□□□□□ -0.23
CSNK1D-226ENST00000585026 GCC1Q96CN9 775 aa13.63□□□□□ -0.23
CSNK1D-226ENST00000585026 KLRK1P26718 216 aa13.62□□□□□ -0.23
CSNK1D-226ENST00000585026 IREB2P48200 963 aaKnown RBP13.62□□□□□ -0.23
CSNK1D-226ENST00000585026 IFNL1Q8IU54 200 aa13.62□□□□□ -0.23
CSNK1D-226ENST00000585026 CHMP3Q9Y3E7 222 aa13.62□□□□□ -0.23
CSNK1D-226ENST00000585026 IL1R1P14778 569 aa13.61□□□□□ -0.23
CSNK1D-226ENST00000585026 RBM5P52756 815 aaKnown RBP eCLIP13.61□□□□□ -0.23
CSNK1D-226ENST00000585026 CASP7P55210 303 aa13.61□□□□□ -0.23
CSNK1D-226ENST00000585026 TNFAIP1Q13829 316 aa13.61□□□□□ -0.23
CSNK1D-226ENST00000585026 CFAP100Q494V2 611 aa13.61□□□□□ -0.23
CSNK1D-226ENST00000585026 TAF7LQ5H9L4 462 aa13.61□□□□□ -0.23
CSNK1D-226ENST00000585026 ERO1AQ96HE7 468 aa13.61□□□□□ -0.23
CSNK1D-226ENST00000585026 WNK4Q96J92 1243 aa13.61□□□□□ -0.23
CSNK1D-226ENST00000585026 TRIM17Q9Y577 477 aa13.61□□□□□ -0.23
CSNK1D-226ENST00000585026 SPDYE2BA6NHP3 402 aa13.6□□□□□ -0.23
CSNK1D-226ENST00000585026 TAF5LO75529 589 aa13.6□□□□□ -0.23
CSNK1D-226ENST00000585026 SPDYE6P0CI01 402 aa13.6□□□□□ -0.23
CSNK1D-226ENST00000585026 CCDC57Q2TAC2 916 aa13.6□□□□□ -0.23
CSNK1D-226ENST00000585026 VEZTQ9HBM0 779 aa13.6□□□□□ -0.23
CSNK1D-226ENST00000585026 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.6□□□□□ -0.23
CSNK1D-226ENST00000585026 F8W031 263 aaPredicted RBP13.59□□□□□ -0.23
CSNK1D-226ENST00000585026 CENPBP07199 599 aaPredicted RBP13.59□□□□□ -0.23
CSNK1D-226ENST00000585026 ARHGEF6Q15052 776 aa13.59□□□□□ -0.23
CSNK1D-226ENST00000585026 LDHAL6AQ6ZMR3 332 aa13.59□□□□□ -0.23
CSNK1D-226ENST00000585026 ANKRD13AQ8IZ07 590 aa13.59□□□□□ -0.23
CSNK1D-226ENST00000585026 FAM9BQ8IZU0 186 aa13.59□□□□□ -0.23
CSNK1D-226ENST00000585026 CERS5Q8N5B7 392 aa13.59□□□□□ -0.23
CSNK1D-226ENST00000585026 HELBQ8NG08 1087 aaPredicted RBP13.59□□□□□ -0.23
CSNK1D-226ENST00000585026 YTHDC1Q96MU7 727 aaKnown RBP13.59□□□□□ -0.23
CSNK1D-226ENST00000585026 CLRN2A0PK11 232 aa13.58□□□□□ -0.24
CSNK1D-226ENST00000585026 PRMT6Q96LA8 375 aaPredicted RBP13.58□□□□□ -0.24
CSNK1D-226ENST00000585026 R3HDMLQ9H3Y0 253 aa13.58□□□□□ -0.24
CSNK1D-226ENST00000585026 CNNM1Q9NRU3 951 aa13.58□□□□□ -0.24
CSNK1D-226ENST00000585026 MYH3P11055 1940 aa13.58□□□□□ -0.24
CSNK1D-226ENST00000585026 PLIN1O60240 522 aa13.57□□□□□ -0.24
CSNK1D-226ENST00000585026 WDHD1O75717 1129 aaPredicted RBP13.57□□□□□ -0.24
CSNK1D-226ENST00000585026 FOXO4P98177 505 aa13.57□□□□□ -0.24
CSNK1D-226ENST00000585026 RASA3Q14644 834 aa13.57□□□□□ -0.24
CSNK1D-226ENST00000585026 LMBR1LQ6UX01 489 aa13.57□□□□□ -0.24
CSNK1D-226ENST00000585026 OTOP1Q7RTM1 612 aa13.57□□□□□ -0.24
CSNK1D-226ENST00000585026 WDR63Q8IWG1 891 aa13.57□□□□□ -0.24
CSNK1D-226ENST00000585026 CLMNQ96JQ2 1002 aa13.57□□□□□ -0.24
CSNK1D-226ENST00000585026 C9orf78Q9NZ63 289 aaPredicted RBP13.57□□□□□ -0.24
CSNK1D-226ENST00000585026 FZD1Q9UP38 647 aa13.57□□□□□ -0.24
CSNK1D-226ENST00000585026 SNAP23O00161 211 aa13.56□□□□□ -0.24
CSNK1D-226ENST00000585026 IGF2BP3O00425 579 aaKnown RBP eCLIP13.56□□□□□ -0.24
CSNK1D-226ENST00000585026 VAMP4O75379 141 aa13.56□□□□□ -0.24
CSNK1D-226ENST00000585026 TNNI2P48788 182 aa13.56□□□□□ -0.24
CSNK1D-226ENST00000585026 SP3Q02447 781 aa13.56□□□□□ -0.24
CSNK1D-226ENST00000585026 UBE4AQ14139 1066 aa13.56□□□□□ -0.24
CSNK1D-226ENST00000585026 BEND3Q5T5X7 828 aa13.56□□□□□ -0.24
CSNK1D-226ENST00000585026 NBPF12Q5TAG4 269 aaPredicted RBP13.56□□□□□ -0.24
CSNK1D-226ENST00000585026 EFCC1Q9HA90 598 aa13.56□□□□□ -0.24
CSNK1D-226ENST00000585026 SERPINA10Q9UK55 444 aa13.56□□□□□ -0.24
CSNK1D-226ENST00000585026 FANCIQ9NVI1 1328 aa13.56□□□□□ -0.24
CSNK1D-226ENST00000585026 IRS2Q9Y4H2 1338 aa13.56□□□□□ -0.24
CSNK1D-226ENST00000585026 GRM8O00222 908 aa13.55□□□□□ -0.24
CSNK1D-226ENST00000585026 USP2O75604 605 aaPredicted RBP13.55□□□□□ -0.24
CSNK1D-226ENST00000585026 HIBADHP31937 336 aaKnown RBP13.55□□□□□ -0.24
CSNK1D-226ENST00000585026 CRHR2Q13324 411 aa13.55□□□□□ -0.24
CSNK1D-226ENST00000585026 MFSD14BQ5SR56 506 aa13.55□□□□□ -0.24
CSNK1D-226ENST00000585026 TTF2Q9UNY4 1162 aaKnown RBP13.55□□□□□ -0.24
CSNK1D-226ENST00000585026 PTPN22Q9Y2R2 807 aa13.55□□□□□ -0.24
CSNK1D-226ENST00000585026 FAM205AQ6ZU69 1335 aa13.55□□□□□ -0.24
CSNK1D-226ENST00000585026 TESPA1A2RU30 521 aaPredicted RBP13.54□□□□□ -0.24
CSNK1D-226ENST00000585026 F6X3S4 739 aa13.54□□□□□ -0.24
CSNK1D-226ENST00000585026 ALDH1L1O75891 902 aa13.54□□□□□ -0.24
CSNK1D-226ENST00000585026 SPDYE2Q495Y8 402 aa13.54□□□□□ -0.24
CSNK1D-226ENST00000585026 VPS37DQ86XT2 251 aa13.54□□□□□ -0.24
CSNK1D-226ENST00000585026 TDRD7Q8NHU6 1098 aaKnown RBP13.54□□□□□ -0.24
CSNK1D-226ENST00000585026 TMEM106CQ9BVX2 250 aa13.54□□□□□ -0.24
CSNK1D-226ENST00000585026 ZNF70Q9UC06 446 aaPredicted RBP13.54□□□□□ -0.24
CSNK1D-226ENST00000585026 JAG2Q9Y219 1238 aa13.54□□□□□ -0.24
CSNK1D-226ENST00000585026 PCDHAC2Q9Y5I4 1007 aa13.54□□□□□ -0.24
CSNK1D-226ENST00000585026 GTF2A2P52657 109 aa13.53□□□□□ -0.24
CSNK1D-226ENST00000585026 EXOSC9Q06265 439 aaKnown RBP13.53□□□□□ -0.24
CSNK1D-226ENST00000585026 NBPF11Q86T75 865 aa13.53□□□□□ -0.24
CSNK1D-226ENST00000585026 CD99L2Q8TCZ2 262 aa13.53□□□□□ -0.24
CSNK1D-226ENST00000585026 OPTNQ96CV9 577 aa13.53□□□□□ -0.24
CSNK1D-226ENST00000585026 HOOK2Q96ED9 719 aa13.53□□□□□ -0.24
CSNK1D-226ENST00000585026 ELP3Q9H9T3 547 aa13.53□□□□□ -0.24
CSNK1D-226ENST00000585026 ZFYVE28Q9HCC9 887 aa13.53□□□□□ -0.24
CSNK1D-226ENST00000585026 CSADQ9Y600 493 aa13.53□□□□□ -0.24
CSNK1D-226ENST00000585026 SPEF2Q9C093 1822 aa13.53□□□□□ -0.24
CSNK1D-226ENST00000585026 FRAT2O75474 233 aaPredicted RBP13.52□□□□□ -0.25
CSNK1D-226ENST00000585026 MAP3K9P80192 1104 aa13.52□□□□□ -0.25
CSNK1D-226ENST00000585026 HNRNPUQ00839 825 aaKnown RBP eCLIP13.52□□□□□ -0.253e-18■□□□□ 9.1
CSNK1D-226ENST00000585026 DZIP1LQ8IYY4 767 aaKnown RBP13.52□□□□□ -0.25
CSNK1D-226ENST00000585026 TBC1D22AQ8WUA7 517 aa13.52□□□□□ -0.25
CSNK1D-226ENST00000585026 ARMC5Q96C12 935 aa13.52□□□□□ -0.25
CSNK1D-226ENST00000585026 ZNF594Q96JF6 807 aaPredicted RBP13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms