RNA–Protein interactions for RNA: ENST00000584966.1

CDH8-213, Transcript of cadherin 8, humanhuman

TSL 2

Gene CDH8, Length 572 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-213ENST00000584966 ERVV-2B6SEH9 535 aa7.45□□□□□ -1.22
CDH8-213ENST00000584966 SOCS7O14512 581 aa7.45□□□□□ -1.22
CDH8-213ENST00000584966 RNMTO43148 476 aaKnown RBP7.45□□□□□ -1.22
CDH8-213ENST00000584966 RAD21O60216 631 aa7.45□□□□□ -1.22
CDH8-213ENST00000584966 TMPOP42166 694 aaKnown RBP7.45□□□□□ -1.22
CDH8-213ENST00000584966 WDR43Q15061 677 aaKnown RBP eCLIP7.45□□□□□ -1.22
CDH8-213ENST00000584966 NFE2L2Q16236 605 aa7.45□□□□□ -1.22
CDH8-213ENST00000584966 TMEM259Q4ZIN3 620 aa7.45□□□□□ -1.22
CDH8-213ENST00000584966 RIC3Q7Z5B4 369 aa7.45□□□□□ -1.22
CDH8-213ENST00000584966 GAS2L2Q8NHY3 880 aa7.45□□□□□ -1.22
CDH8-213ENST00000584966 PIGBQ92521 554 aa7.45□□□□□ -1.22
CDH8-213ENST00000584966 KCTD15Q96SI1 283 aaPredicted RBP7.45□□□□□ -1.22
CDH8-213ENST00000584966 SNRKQ9NRH2 765 aa7.45□□□□□ -1.22
CDH8-213ENST00000584966 COG6Q9Y2V7 657 aa7.45□□□□□ -1.22
CDH8-213ENST00000584966 TUBGCP6Q96RT7 1819 aa7.45□□□□□ -1.22
CDH8-213ENST00000584966 MAP3K5Q99683 1374 aa7.45□□□□□ -1.22
CDH8-213ENST00000584966 COL5A3P25940 1745 aaPredicted RBP7.44□□□□□ -1.22
CDH8-213ENST00000584966 KRBA1A5PL33 1030 aa7.44□□□□□ -1.22
CDH8-213ENST00000584966 GNAT3A8MTJ3 354 aa7.44□□□□□ -1.22
CDH8-213ENST00000584966 DCTN1Q14203 1278 aa7.44□□□□□ -1.22
CDH8-213ENST00000584966 FOXD4L5Q5VV16 416 aaPredicted RBP7.44□□□□□ -1.22
CDH8-213ENST00000584966 CCDC125Q86Z20 511 aa7.44□□□□□ -1.22
CDH8-213ENST00000584966 ACDQ96AP0 544 aa7.44□□□□□ -1.22
CDH8-213ENST00000584966 PNNQ9H307 717 aaKnown RBP7.44□□□□□ -1.22
CDH8-213ENST00000584966 CICQ96RK0 1608 aaPredicted RBP7.44□□□□□ -1.22
CDH8-213ENST00000584966 TJP1Q07157 1748 aa7.44□□□□□ -1.22
CDH8-213ENST00000584966 APAF1O14727 1248 aa7.43□□□□□ -1.22
CDH8-213ENST00000584966 PLSCR1O15162 318 aa7.43□□□□□ -1.22
CDH8-213ENST00000584966 HTATSF1O43719 755 aaKnown RBP7.43□□□□□ -1.22
CDH8-213ENST00000584966 HSP90AB1P08238 724 aaKnown RBP7.43□□□□□ -1.22
CDH8-213ENST00000584966 DHX9Q08211 1270 aaKnown RBP7.43□□□□□ -1.22
CDH8-213ENST00000584966 C1orf141Q5JVX7 400 aa7.43□□□□□ -1.22
CDH8-213ENST00000584966 PRPF38BQ5VTL8 546 aaKnown RBP7.43□□□□□ -1.22
CDH8-213ENST00000584966 DEFB132Q7Z7B7 95 aa7.43□□□□□ -1.22
CDH8-213ENST00000584966 FAM9BQ8IZU0 186 aa7.43□□□□□ -1.22
CDH8-213ENST00000584966 NFATC2IPQ8NCF5 419 aa7.43□□□□□ -1.22
CDH8-213ENST00000584966 ZNF837Q96EG3 531 aaPredicted RBP7.43□□□□□ -1.22
CDH8-213ENST00000584966 CAMKK2Q96RR4 588 aa7.43□□□□□ -1.22
CDH8-213ENST00000584966 PODXL2Q9NZ53 605 aa7.43□□□□□ -1.22
CDH8-213ENST00000584966 C5P01031 1676 aa7.43□□□□□ -1.22
CDH8-213ENST00000584966 QSER1Q2KHR3 1735 aa7.42□□□□□ -1.22
CDH8-213ENST00000584966 APBA3O96018 575 aa7.42□□□□□ -1.22
CDH8-213ENST00000584966 RIPK4P57078 832 aa7.42□□□□□ -1.22
CDH8-213ENST00000584966 MCM10Q7L590 875 aa7.42□□□□□ -1.22
CDH8-213ENST00000584966 SLC52A2Q9HAB3 445 aa7.42□□□□□ -1.22
CDH8-213ENST00000584966 ATG3Q9NT62 314 aa7.42□□□□□ -1.22
CDH8-213ENST00000584966 ASAP1Q9ULH1 1129 aa7.42□□□□□ -1.22
CDH8-213ENST00000584966 RRP7AQ9Y3A4 280 aaKnown RBP7.42□□□□□ -1.22
CDH8-213ENST00000584966 UBR3Q6ZT12 1888 aa7.42□□□□□ -1.22
CDH8-213ENST00000584966 KCPQ6ZWJ8 1503 aa7.42□□□□□ -1.22
CDH8-213ENST00000584966 RHOQP17081 205 aa7.41□□□□□ -1.22
CDH8-213ENST00000584966 EZH2Q15910 746 aaKnown RBP7.41□□□□□ -1.22
CDH8-213ENST00000584966 INTS6LQ5JSJ4 861 aaKnown RBP7.41□□□□□ -1.22
CDH8-213ENST00000584966 FOXR1Q6PIV2 292 aa7.41□□□□□ -1.22
CDH8-213ENST00000584966 LYSMD3Q7Z3D4 306 aa7.41□□□□□ -1.22
CDH8-213ENST00000584966 MTMR14Q8NCE2 650 aa7.41□□□□□ -1.22
CDH8-213ENST00000584966 SLC10A4Q96EP9 437 aa7.41□□□□□ -1.22
CDH8-213ENST00000584966 SLC4A9Q96Q91 983 aa7.41□□□□□ -1.22
CDH8-213ENST00000584966 THUMPD2Q9BTF0 503 aaKnown RBP7.41□□□□□ -1.22
CDH8-213ENST00000584966 MAPK8IP3Q9UPT6 1336 aa7.41□□□□□ -1.22
CDH8-213ENST00000584966 KCNQ3O43525 872 aa7.4□□□□□ -1.22
CDH8-213ENST00000584966 CABP4P57796 275 aa7.4□□□□□ -1.22
CDH8-213ENST00000584966 SNRPNP63162 240 aaKnown RBP7.4□□□□□ -1.22
CDH8-213ENST00000584966 CCDC27Q2M243 656 aa7.4□□□□□ -1.22
CDH8-213ENST00000584966 PRICKLE2Q7Z3G6 844 aa7.4□□□□□ -1.22
CDH8-213ENST00000584966 SYTL4Q96C24 671 aaPredicted RBP7.4□□□□□ -1.22
CDH8-213ENST00000584966 LRRC4BQ9NT99 713 aa7.4□□□□□ -1.22
CDH8-213ENST00000584966 TMOD3Q9NYL9 352 aa7.4□□□□□ -1.22
CDH8-213ENST00000584966 CACNA1FO60840 1977 aa7.39□□□□□ -1.23
CDH8-213ENST00000584966 LAMB4A4D0S4 1761 aa7.39□□□□□ -1.23
CDH8-213ENST00000584966 C4BP0C0L5 1744 aa7.39□□□□□ -1.23
CDH8-213ENST00000584966 ZNF521Q96K83 1311 aa7.39□□□□□ -1.23
CDH8-213ENST00000584966 LILRB3O75022 631 aa7.39□□□□□ -1.23
CDH8-213ENST00000584966 ZNF853P0CG23 659 aa7.39□□□□□ -1.23
CDH8-213ENST00000584966 SLC39A6Q13433 755 aa7.39□□□□□ -1.23
CDH8-213ENST00000584966 TAF7Q15545 349 aaPredicted RBP7.39□□□□□ -1.23
CDH8-213ENST00000584966 DBN1Q16643 649 aa7.39□□□□□ -1.23
CDH8-213ENST00000584966 TXNRD1Q16881 649 aa7.39□□□□□ -1.23
CDH8-213ENST00000584966 RIPOR1Q6ZS17 1223 aa7.39□□□□□ -1.23
CDH8-213ENST00000584966 TRIM22Q8IYM9 498 aa7.39□□□□□ -1.23
CDH8-213ENST00000584966 ARHGAP9Q9BRR9 750 aa7.39□□□□□ -1.23
CDH8-213ENST00000584966 TMPRSS4Q9NRS4 437 aa7.39□□□□□ -1.23
CDH8-213ENST00000584966 MIS18AQ9NYP9 233 aa7.39□□□□□ -1.23
CDH8-213ENST00000584966 SERPINA10Q9UK55 444 aa7.39□□□□□ -1.23
CDH8-213ENST00000584966 COL24A1Q17RW2 1714 aa7.38□□□□□ -1.23
CDH8-213ENST00000584966 PALLDQ8WX93 1383 aa7.38□□□□□ -1.23
CDH8-213ENST00000584966 HEG1Q9ULI3 1381 aa7.38□□□□□ -1.23
CDH8-213ENST00000584966 CHL1O00533 1208 aa7.38□□□□□ -1.23
CDH8-213ENST00000584966 NEFMP07197 916 aa7.38□□□□□ -1.23
CDH8-213ENST00000584966 KCNQ4P56696 695 aa7.38□□□□□ -1.23
CDH8-213ENST00000584966 ITPK1Q13572 414 aa7.38□□□□□ -1.23
CDH8-213ENST00000584966 QPCTQ16769 361 aa7.38□□□□□ -1.23
CDH8-213ENST00000584966 ZNF790Q6PG37 636 aa7.38□□□□□ -1.23
CDH8-213ENST00000584966 WWC1Q8IX03 1113 aa7.38□□□□□ -1.23
CDH8-213ENST00000584966 RTF1Q92541 710 aaKnown RBP7.38□□□□□ -1.23
CDH8-213ENST00000584966 GPKOWQ92917 476 aaPredicted RBP eCLIP7.38□□□□□ -1.23
CDH8-213ENST00000584966 SRCAPQ6ZRS2 3230 aa7.38□□□□□ -1.23
CDH8-213ENST00000584966 CASZ1Q86V15 1759 aa7.38□□□□□ -1.23
CDH8-213ENST00000584966 LOC102724428A0A0B4J2F2 783 aa7.37□□□□□ -1.23
CDH8-213ENST00000584966 BTBD11A6QL63 1104 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms