RNA–Protein interactions for RNA: ENST00000584897.5

SMCHD1-211, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 2

Gene SMCHD1, Length 4,143 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-211ENST00000584897 FURINP09958 794 aa2.92□□□□□ -1.94
SMCHD1-211ENST00000584897 HOXD8P13378 290 aaPredicted RBP2.92□□□□□ -1.94
SMCHD1-211ENST00000584897 TMEM130Q8N3G9 435 aa2.92□□□□□ -1.94
SMCHD1-211ENST00000584897 STOML1Q9UBI4 398 aa2.92□□□□□ -1.94
SMCHD1-211ENST00000584897 KRBA1A5PL33 1030 aa2.92□□□□□ -1.94
SMCHD1-211ENST00000584897 ATG7O95352 703 aa2.92□□□□□ -1.94
SMCHD1-211ENST00000584897 CPB1P15086 417 aa2.92□□□□□ -1.94
SMCHD1-211ENST00000584897 HSPA1LP34931 641 aa2.92□□□□□ -1.94
SMCHD1-211ENST00000584897 PIP4K2BP78356 416 aa2.92□□□□□ -1.94
SMCHD1-211ENST00000584897 ADGRE1Q14246 886 aa2.92□□□□□ -1.94
SMCHD1-211ENST00000584897 ARTNQ5T4W7 220 aa2.92□□□□□ -1.94
SMCHD1-211ENST00000584897 IL22RA1Q8N6P7 574 aa2.92□□□□□ -1.94
SMCHD1-211ENST00000584897 TRPM4Q8TD43 1214 aa2.92□□□□□ -1.94
SMCHD1-211ENST00000584897 GNEQ9Y223 722 aaKnown RBP2.92□□□□□ -1.94
SMCHD1-211ENST00000584897 RTCBQ9Y3I0 505 aaKnown RBP2.92□□□□□ -1.94
SMCHD1-211ENST00000584897 C9orf84Q5VXU9 1444 aa2.92□□□□□ -1.94
SMCHD1-211ENST00000584897 FAM135AQ9P2D6 1515 aa2.92□□□□□ -1.94
SMCHD1-211ENST00000584897 MED14O60244 1454 aa2.91□□□□□ -1.94
SMCHD1-211ENST00000584897 TRAPPC8Q9Y2L5 1435 aa2.91□□□□□ -1.94
SMCHD1-211ENST00000584897 ZBTB7BO15156 539 aaPredicted RBP2.91□□□□□ -1.94
SMCHD1-211ENST00000584897 DUSP27Q5VZP5 1158 aa2.91□□□□□ -1.94
SMCHD1-211ENST00000584897 PBXIP1Q96AQ6 731 aa2.91□□□□□ -1.94
SMCHD1-211ENST00000584897 PLD4Q96BZ4 506 aa2.91□□□□□ -1.94
SMCHD1-211ENST00000584897 SEC31BQ9NQW1 1179 aa2.91□□□□□ -1.94
SMCHD1-211ENST00000584897 CNTLNQ9NXG0 1405 aa2.91□□□□□ -1.94
SMCHD1-211ENST00000584897 UNCXA6NJT0 531 aa2.91□□□□□ -1.94
SMCHD1-211ENST00000584897 HSPA2P54652 639 aa2.91□□□□□ -1.94
SMCHD1-211ENST00000584897 MAP7Q14244 749 aa2.91□□□□□ -1.94
SMCHD1-211ENST00000584897 CD163Q86VB7 1156 aa2.91□□□□□ -1.94
SMCHD1-211ENST00000584897 DMRTC2Q8IXT2 367 aaPredicted RBP2.91□□□□□ -1.94
SMCHD1-211ENST00000584897 FMR1NBQ8N0W7 255 aaPredicted RBP2.91□□□□□ -1.94
SMCHD1-211ENST00000584897 STK11IPQ8N1F8 1099 aa2.91□□□□□ -1.94
SMCHD1-211ENST00000584897 AGBL5Q8NDL9 886 aa2.91□□□□□ -1.94
SMCHD1-211ENST00000584897 FBXL18Q96ME1 805 aa2.91□□□□□ -1.94
SMCHD1-211ENST00000584897 RNF112Q9ULX5 631 aa2.91□□□□□ -1.94
SMCHD1-211ENST00000584897 ANGEL1Q9UNK9 670 aaKnown RBP2.91□□□□□ -1.94
SMCHD1-211ENST00000584897 PARP3Q9Y6F1 533 aa2.91□□□□□ -1.94
SMCHD1-211ENST00000584897 SPHKAPQ2M3C7 1700 aa2.91□□□□□ -1.94
SMCHD1-211ENST00000584897 YBX3P16989 372 aaKnown RBP eCLIP2.91□□□□□ -1.94
SMCHD1-211ENST00000584897 TREML1Q86YW5 311 aa2.91□□□□□ -1.94
SMCHD1-211ENST00000584897 CLEC10AQ8IUN9 316 aa2.91□□□□□ -1.94
SMCHD1-211ENST00000584897 WFDC12Q8WWY7 111 aa2.91□□□□□ -1.94
SMCHD1-211ENST00000584897 SMG9Q9H0W8 520 aaKnown RBP2.91□□□□□ -1.94
SMCHD1-211ENST00000584897 TMX1Q9H3N1 280 aa2.91□□□□□ -1.94
SMCHD1-211ENST00000584897 TRAK1Q9UPV9 953 aa2.91□□□□□ -1.94
SMCHD1-211ENST00000584897 STRCP1A6NGW2 1772 aa2.91□□□□□ -1.94
SMCHD1-211ENST00000584897 CEP170BQ9Y4F5 1589 aaPredicted RBP2.91□□□□□ -1.94
SMCHD1-211ENST00000584897 NUDT8Q8WV74 236 aa2.91□□□□□ -1.94
SMCHD1-211ENST00000584897 RNF208Q9H0X6 261 aa2.91□□□□□ -1.94
SMCHD1-211ENST00000584897 STIM2Q9P246 746 aa2.91□□□□□ -1.94
SMCHD1-211ENST00000584897 HECW1Q76N89 1606 aa2.91□□□□□ -1.94
SMCHD1-211ENST00000584897 NWD1Q149M9 1564 aa2.91□□□□□ -1.94
SMCHD1-211ENST00000584897 SHANK2Q9UPX8 1470 aa2.9□□□□□ -1.94
SMCHD1-211ENST00000584897 SETBP1Q9Y6X0 1596 aa2.9□□□□□ -1.94
SMCHD1-211ENST00000584897 E9PSI1 815 aa2.9□□□□□ -1.94
SMCHD1-211ENST00000584897 C2CD2LO14523 706 aa2.9□□□□□ -1.94
SMCHD1-211ENST00000584897 DYRK3O43781 588 aa2.9□□□□□ -1.94
SMCHD1-211ENST00000584897 IGHA2P01877 340 aa2.9□□□□□ -1.94
SMCHD1-211ENST00000584897 SNRPNP63162 240 aaKnown RBP2.9□□□□□ -1.94
SMCHD1-211ENST00000584897 GSX2Q9BZM3 304 aa2.9□□□□□ -1.94
SMCHD1-211ENST00000584897 LRRC9Q6ZRR7 1453 aa2.9□□□□□ -1.94
SMCHD1-211ENST00000584897 GLB1P16278 677 aa2.9□□□□□ -1.95
SMCHD1-211ENST00000584897 ERCC3P19447 782 aa2.9□□□□□ -1.95
SMCHD1-211ENST00000584897 RXRBP28702 533 aa2.9□□□□□ -1.95
SMCHD1-211ENST00000584897 DUOXA2Q1HG44 320 aa2.9□□□□□ -1.95
SMCHD1-211ENST00000584897 POTEAQ6S8J7 498 aa2.9□□□□□ -1.95
SMCHD1-211ENST00000584897 TSEN2Q8NCE0 465 aaKnown RBP2.9□□□□□ -1.95
SMCHD1-211ENST00000584897 CITED4Q96RK1 184 aa2.9□□□□□ -1.95
SMCHD1-211ENST00000584897 OSBPL1AQ9BXW6 950 aa2.9□□□□□ -1.95
SMCHD1-211ENST00000584897 RAD18Q9NS91 495 aa2.9□□□□□ -1.95
SMCHD1-211ENST00000584897 LEMD3Q9Y2U8 911 aa2.9□□□□□ -1.95
SMCHD1-211ENST00000584897 ATP10AO60312 1499 aa2.9□□□□□ -1.95
SMCHD1-211ENST00000584897 DENND4BO75064 1496 aaPredicted RBP2.9□□□□□ -1.95
SMCHD1-211ENST00000584897 ZC3H13Q5T200 1668 aaKnown RBP2.9□□□□□ -1.95
SMCHD1-211ENST00000584897 NDUFB5O43674 189 aa2.9□□□□□ -1.95
SMCHD1-211ENST00000584897 IGLV1-40P01703 118 aa2.9□□□□□ -1.95
SMCHD1-211ENST00000584897 MZF1P28698 734 aaPredicted RBP2.9□□□□□ -1.95
SMCHD1-211ENST00000584897 MFAP1P55081 439 aaKnown RBP2.9□□□□□ -1.95
SMCHD1-211ENST00000584897 PTK7Q13308 1070 aa2.9□□□□□ -1.95
SMCHD1-211ENST00000584897 ZNF438Q7Z4V0 828 aa2.9□□□□□ -1.95
SMCHD1-211ENST00000584897 SYTL4Q96C24 671 aaPredicted RBP2.9□□□□□ -1.95
SMCHD1-211ENST00000584897 EPHA4P54764 986 aa2.89□□□□□ -1.95
SMCHD1-211ENST00000584897 CYP27C1Q4G0S4 372 aa2.89□□□□□ -1.95
SMCHD1-211ENST00000584897 ZDHHC1Q8WTX9 485 aa2.89□□□□□ -1.95
SMCHD1-211ENST00000584897 CLP1Q92989 425 aaKnown RBP2.89□□□□□ -1.95
SMCHD1-211ENST00000584897 ASIC4Q96FT7 647 aa2.89□□□□□ -1.95
SMCHD1-211ENST00000584897 RUSC1Q9BVN2 902 aa2.89□□□□□ -1.95
SMCHD1-211ENST00000584897 EMILIN2Q9BXX0 1053 aa2.89□□□□□ -1.95
SMCHD1-211ENST00000584897 TOM1O60784 492 aa2.89□□□□□ -1.95
SMCHD1-211ENST00000584897 PHACTR2O75167 634 aa2.89□□□□□ -1.95
SMCHD1-211ENST00000584897 ALBP02768 609 aa2.89□□□□□ -1.95
SMCHD1-211ENST00000584897 CD68P34810 354 aaPredicted RBP2.89□□□□□ -1.95
SMCHD1-211ENST00000584897 MBTPS1Q14703 1052 aa2.89□□□□□ -1.95
SMCHD1-211ENST00000584897 ERICH6BQ5W0A0 696 aa2.89□□□□□ -1.95
SMCHD1-211ENST00000584897 HSH2DQ96JZ2 352 aa2.89□□□□□ -1.95
SMCHD1-211ENST00000584897 USP35Q9P2H5 1018 aa2.89□□□□□ -1.95
SMCHD1-211ENST00000584897 FAM135BQ49AJ0 1406 aa2.89□□□□□ -1.95
SMCHD1-211ENST00000584897 HMGB1P09429 215 aaKnown RBP2.89□□□□□ -1.95
SMCHD1-211ENST00000584897 FSTP19883 344 aa2.89□□□□□ -1.95
SMCHD1-211ENST00000584897 CES1P23141 567 aa2.89□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms