RNA–Protein interactions for RNA: ENST00000584878.1

NLK-206, Transcript of nemo like kinase, humanhuman

TSL 1 (best)

Gene NLK, Length 777 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NLK-206ENST00000584878 DCAF11Q8TEB1 546 aa8.61□□□□□ -1.03
NLK-206ENST00000584878 NPHS2Q9NP85 383 aa8.61□□□□□ -1.03
NLK-206ENST00000584878 IVNS1ABPQ9Y6Y0 642 aa8.61□□□□□ -1.03
NLK-206ENST00000584878 SOX1O00570 391 aaPredicted RBP8.6□□□□□ -1.03
NLK-206ENST00000584878 GRIA4P48058 902 aa8.6□□□□□ -1.03
NLK-206ENST00000584878 IKBKEQ14164 716 aa8.6□□□□□ -1.03
NLK-206ENST00000584878 SPRED3Q2MJR0 410 aa8.6□□□□□ -1.03
NLK-206ENST00000584878 Q6ZS46 218 aa8.6□□□□□ -1.03
NLK-206ENST00000584878 DZIP1LQ8IYY4 767 aaKnown RBP8.6□□□□□ -1.03
NLK-206ENST00000584878 UBL7Q96S82 380 aaPredicted RBP8.6□□□□□ -1.03
NLK-206ENST00000584878 TCF12Q99081 682 aa8.6□□□□□ -1.03
NLK-206ENST00000584878 LIN7BQ9HAP6 207 aa8.6□□□□□ -1.03
NLK-206ENST00000584878 EIF1AYO14602 144 aaKnown RBP8.59□□□□□ -1.03
NLK-206ENST00000584878 CPNE3O75131 537 aaKnown RBP8.59□□□□□ -1.03
NLK-206ENST00000584878 H2AFB1P0C5Y9 115 aa8.59□□□□□ -1.03
NLK-206ENST00000584878 H2AFB2P0C5Z0 115 aa8.59□□□□□ -1.03
NLK-206ENST00000584878 TMC7Q7Z402 723 aa8.59□□□□□ -1.03
NLK-206ENST00000584878 CITED4Q96RK1 184 aa8.59□□□□□ -1.03
NLK-206ENST00000584878 RBCK1Q9BYM8 510 aa8.59□□□□□ -1.03
NLK-206ENST00000584878 OSGEPQ9NPF4 335 aa8.59□□□□□ -1.03
NLK-206ENST00000584878 C19orf57Q0VDD7 668 aa8.58□□□□□ -1.04
NLK-206ENST00000584878 CCNJLQ8IV13 435 aa8.58□□□□□ -1.04
NLK-206ENST00000584878 WNT8BQ93098 351 aa8.58□□□□□ -1.04
NLK-206ENST00000584878 A0A096LPE4 126 aa8.57□□□□□ -1.04
NLK-206ENST00000584878 A0A1W2PPZ6 126 aa8.57□□□□□ -1.04
NLK-206ENST00000584878 ESRRAP11474 423 aaPredicted RBP8.57□□□□□ -1.04
NLK-206ENST00000584878 KRTAP4-8Q9BYQ9 185 aa8.57□□□□□ -1.04
NLK-206ENST00000584878 DCTN4Q9UJW0 460 aa8.57□□□□□ -1.04
NLK-206ENST00000584878 NEFLP07196 543 aa8.56□□□□□ -1.04
NLK-206ENST00000584878 MAPK1P28482 360 aa8.56□□□□□ -1.04
NLK-206ENST00000584878 PRR23CQ6ZRP0 262 aa8.56□□□□□ -1.04
NLK-206ENST00000584878 CCDC74AQ96AQ1 378 aa8.56□□□□□ -1.04
NLK-206ENST00000584878 DMRTB1Q96MA1 342 aa8.56□□□□□ -1.04
NLK-206ENST00000584878 USP26Q9BXU7 913 aa8.56□□□□□ -1.04
NLK-206ENST00000584878 EHD4Q9H223 541 aa8.56□□□□□ -1.04
NLK-206ENST00000584878 ARL4DP49703 201 aa8.55□□□□□ -1.04
NLK-206ENST00000584878 ZMYM1Q5SVZ6 1142 aa8.55□□□□□ -1.04
NLK-206ENST00000584878 KIAA0319Q5VV43 1072 aa8.55□□□□□ -1.04
NLK-206ENST00000584878 PI16Q6UXB8 463 aa8.55□□□□□ -1.04
NLK-206ENST00000584878 EPS8L3Q8TE67 593 aaKnown RBP8.55□□□□□ -1.04
NLK-206ENST00000584878 CSRNP1Q96S65 589 aa8.55□□□□□ -1.04
NLK-206ENST00000584878 GSTM4Q03013 218 aa8.54□□□□□ -1.04
NLK-206ENST00000584878 PCDH1Q08174 1060 aa8.54□□□□□ -1.04
NLK-206ENST00000584878 ZNF423Q2M1K9 1284 aa8.54□□□□□ -1.04
NLK-206ENST00000584878 ARMC10Q8N2F6 343 aa8.54□□□□□ -1.04
NLK-206ENST00000584878 ALKBH8Q96BT7 664 aaKnown RBP8.54□□□□□ -1.04
NLK-206ENST00000584878 RUSC1Q9BVN2 902 aa8.54□□□□□ -1.04
NLK-206ENST00000584878 GADD45BO75293 160 aaPredicted RBP8.53□□□□□ -1.04
NLK-206ENST00000584878 DLGAP3O95886 979 aa8.53□□□□□ -1.04
NLK-206ENST00000584878 DNAJC25Q9H1X3 360 aa8.53□□□□□ -1.04
NLK-206ENST00000584878 CLEC4MQ9H2X3 399 aaPredicted RBP8.53□□□□□ -1.04
NLK-206ENST00000584878 LOC100289279A0A1B0GTE1 492 aa8.52□□□□□ -1.05
NLK-206ENST00000584878 PREPP48147 710 aa8.52□□□□□ -1.05
NLK-206ENST00000584878 KCNA1Q09470 495 aa8.52□□□□□ -1.05
NLK-206ENST00000584878 UTP4Q969X6 686 aaKnown RBP8.52□□□□□ -1.05
NLK-206ENST00000584878 TRAIPQ9BWF2 469 aa8.52□□□□□ -1.05
NLK-206ENST00000584878 CEP41Q9BYV8 373 aa8.52□□□□□ -1.05
NLK-206ENST00000584878 ABCB6Q9NP58 842 aa8.52□□□□□ -1.05
NLK-206ENST00000584878 GRM2Q14416 872 aa8.51□□□□□ -1.05
NLK-206ENST00000584878 Q8N3U1 123 aa8.51□□□□□ -1.05
NLK-206ENST00000584878 FAM46AQ96IP4 442 aaKnown RBP8.51□□□□□ -1.05
NLK-206ENST00000584878 RNF208Q9H0X6 261 aa8.51□□□□□ -1.05
NLK-206ENST00000584878 ZNF576Q9H609 170 aa8.51□□□□□ -1.05
NLK-206ENST00000584878 SOX17Q9H6I2 414 aaPredicted RBP8.51□□□□□ -1.05
NLK-206ENST00000584878 PNMA6FA0A0J9YX94 578 aa8.5□□□□□ -1.05
NLK-206ENST00000584878 CTSBP07858 339 aa8.5□□□□□ -1.05
NLK-206ENST00000584878 DSC3Q14574 896 aa8.5□□□□□ -1.05
NLK-206ENST00000584878 NRSN2Q9GZP1 204 aa8.5□□□□□ -1.05
NLK-206ENST00000584878 TREHO43280 583 aa8.49□□□□□ -1.05
NLK-206ENST00000584878 ECEL1O95672 775 aa8.49□□□□□ -1.05
NLK-206ENST00000584878 ITPKAP23677 461 aa8.49□□□□□ -1.05
NLK-206ENST00000584878 FDX2Q6P4F2 183 aa8.49□□□□□ -1.05
NLK-206ENST00000584878 GLIS3Q8NEA6 775 aa8.49□□□□□ -1.05
NLK-206ENST00000584878 SETDB2Q96T68 719 aa8.49□□□□□ -1.05
NLK-206ENST00000584878 RAXQ9Y2V3 346 aa8.49□□□□□ -1.05
NLK-206ENST00000584878 SCO2A0A1W2PP80 73 aa8.48□□□□□ -1.05
NLK-206ENST00000584878 DHX15O43143 795 aaKnown RBP8.48□□□□□ -1.05
NLK-206ENST00000584878 SART1O43290 800 aaKnown RBP8.48□□□□□ -1.05
NLK-206ENST00000584878 FSTP19883 344 aa8.48□□□□□ -1.05
NLK-206ENST00000584878 ZNF157P51786 506 aaPredicted RBP8.48□□□□□ -1.05
NLK-206ENST00000584878 ANKRD34AQ69YU3 496 aa8.48□□□□□ -1.05
NLK-206ENST00000584878 MYRFLQ96LU7 910 aa8.48□□□□□ -1.05
NLK-206ENST00000584878 TRIM56Q9BRZ2 755 aaKnown RBP8.48□□□□□ -1.05
NLK-206ENST00000584878 TMPRSS13Q9BYE2 586 aa8.48□□□□□ -1.05
NLK-206ENST00000584878 TMEM238LA0A1B0GVL6 79 aa8.47□□□□□ -1.05
NLK-206ENST00000584878 MAOBP27338 520 aa8.47□□□□□ -1.05
NLK-206ENST00000584878 MAPK8P45983 427 aa8.47□□□□□ -1.05
NLK-206ENST00000584878 PLCB3Q01970 1234 aa8.47□□□□□ -1.05
NLK-206ENST00000584878 NUTM2GQ5VZR2 741 aa8.47□□□□□ -1.05
NLK-206ENST00000584878 PRPF40BQ6NWY9 871 aaKnown RBP8.47□□□□□ -1.05
NLK-206ENST00000584878 HMX2A2RU54 273 aa8.46□□□□□ -1.06
NLK-206ENST00000584878 B3GALT4O96024 378 aa8.46□□□□□ -1.06
NLK-206ENST00000584878 BMP3P12645 472 aa8.46□□□□□ -1.06
NLK-206ENST00000584878 DRD2P14416 443 aa8.46□□□□□ -1.06
NLK-206ENST00000584878 FAAP100Q0VG06 881 aa8.46□□□□□ -1.06
NLK-206ENST00000584878 ENOX2Q16206 610 aaKnown RBP8.46□□□□□ -1.06
NLK-206ENST00000584878 UVSSAQ2YD98 709 aa8.46□□□□□ -1.06
NLK-206ENST00000584878 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.46□□□□□ -1.06
NLK-206ENST00000584878 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.46□□□□□ -1.06
NLK-206ENST00000584878 TRIM42Q8IWZ5 723 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms