RNA–Protein interactions for RNA: ENST00000584525.5

CDK5RAP3-234, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 530 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-234ENST00000584525 PPP1R12BO60237 982 aaPredicted RBP16.61■□□□□ 0.25
CDK5RAP3-234ENST00000584525 TAF5LO75529 589 aa16.61■□□□□ 0.25
CDK5RAP3-234ENST00000584525 CASP7P55210 303 aa16.61■□□□□ 0.25
CDK5RAP3-234ENST00000584525 HELBQ8NG08 1087 aaPredicted RBP16.61■□□□□ 0.25
CDK5RAP3-234ENST00000584525 DNAAF4Q8WXU2 420 aa16.61■□□□□ 0.25
CDK5RAP3-234ENST00000584525 CFHR5Q9BXR6 569 aa16.61■□□□□ 0.25
CDK5RAP3-234ENST00000584525 CHMP3Q9Y3E7 222 aa16.61■□□□□ 0.25
CDK5RAP3-234ENST00000584525 MANSC4A6NHS7 340 aaPredicted RBP16.6■□□□□ 0.25
CDK5RAP3-234ENST00000584525 MYO1BO43795 1136 aa16.6■□□□□ 0.25
CDK5RAP3-234ENST00000584525 INHBEP58166 350 aa16.6■□□□□ 0.25
CDK5RAP3-234ENST00000584525 CERS5Q8N5B7 392 aa16.6■□□□□ 0.25
CDK5RAP3-234ENST00000584525 LINS1Q8NG48 757 aa16.6■□□□□ 0.25
CDK5RAP3-234ENST00000584525 SPINK5Q9NQ38 1064 aaPredicted RBP16.6■□□□□ 0.25
CDK5RAP3-234ENST00000584525 ZNF521Q96K83 1311 aa16.6■□□□□ 0.25
CDK5RAP3-234ENST00000584525 CLRN2A0PK11 232 aa16.59■□□□□ 0.25
CDK5RAP3-234ENST00000584525 IFIT5Q13325 482 aaKnown RBP16.59■□□□□ 0.25
CDK5RAP3-234ENST00000584525 SUPT20HL1Q3ZLR7 823 aa16.59■□□□□ 0.25
CDK5RAP3-234ENST00000584525 CFAP100Q494V2 611 aa16.59■□□□□ 0.25
CDK5RAP3-234ENST00000584525 IFNL1Q8IU54 200 aa16.59■□□□□ 0.25
CDK5RAP3-234ENST00000584525 VEZTQ9HBM0 779 aa16.59■□□□□ 0.25
CDK5RAP3-234ENST00000584525 PCDHAC2Q9Y5I4 1007 aa16.59■□□□□ 0.25
CDK5RAP3-234ENST00000584525 AKAP11Q9UKA4 1901 aa16.58■□□□□ 0.25
CDK5RAP3-234ENST00000584525 ZNF804AQ7Z570 1209 aa16.58■□□□□ 0.24
CDK5RAP3-234ENST00000584525 MTMR14Q8NCE2 650 aa16.58■□□□□ 0.24
CDK5RAP3-234ENST00000584525 WNK4Q96J92 1243 aa16.58■□□□□ 0.24
CDK5RAP3-234ENST00000584525 CLMNQ96JQ2 1002 aa16.58■□□□□ 0.24
CDK5RAP3-234ENST00000584525 JAG2Q9Y219 1238 aa16.58■□□□□ 0.24
CDK5RAP3-234ENST00000584525 TRIM17Q9Y577 477 aa16.58■□□□□ 0.24
CDK5RAP3-234ENST00000584525 PPP2R3BQ9Y5P8 575 aa16.58■□□□□ 0.24
CDK5RAP3-234ENST00000584525 PDE4DIPQ5VU43 2346 aa16.57■□□□□ 0.24
CDK5RAP3-234ENST00000584525 PLIN1O60240 522 aa16.57■□□□□ 0.24
CDK5RAP3-234ENST00000584525 VAMP4O75379 141 aa16.57■□□□□ 0.24
CDK5RAP3-234ENST00000584525 ZBTB48P10074 688 aaPredicted RBP16.57■□□□□ 0.24
CDK5RAP3-234ENST00000584525 RBM5P52756 815 aaKnown RBP eCLIP16.57■□□□□ 0.24
CDK5RAP3-234ENST00000584525 SLFN5Q08AF3 891 aa16.57■□□□□ 0.24
CDK5RAP3-234ENST00000584525 MAP3K11Q16584 847 aa16.57■□□□□ 0.24
CDK5RAP3-234ENST00000584525 C15orf52Q6ZUT6 534 aaKnown RBP16.57■□□□□ 0.24
CDK5RAP3-234ENST00000584525 PRMT6Q96LA8 375 aaPredicted RBP16.57■□□□□ 0.24
CDK5RAP3-234ENST00000584525 COL1A1P02452 1464 aaPredicted RBP16.56■□□□□ 0.24
CDK5RAP3-234ENST00000584525 IRS2Q9Y4H2 1338 aa16.56■□□□□ 0.24
CDK5RAP3-234ENST00000584525 SPDYE2BA6NHP3 402 aa16.56■□□□□ 0.24
CDK5RAP3-234ENST00000584525 SPDYE6P0CI01 402 aa16.56■□□□□ 0.24
CDK5RAP3-234ENST00000584525 IL1R1P14778 569 aa16.56■□□□□ 0.24
CDK5RAP3-234ENST00000584525 FOXO4P98177 505 aa16.56■□□□□ 0.24
CDK5RAP3-234ENST00000584525 TAF7LQ5H9L4 462 aa16.56■□□□□ 0.24
CDK5RAP3-234ENST00000584525 NBPF12Q5TAG4 269 aaPredicted RBP16.56■□□□□ 0.24
CDK5RAP3-234ENST00000584525 CACNA1FO60840 1977 aa16.55■□□□□ 0.24
CDK5RAP3-234ENST00000584525 PSME4Q14997 1843 aa16.55■□□□□ 0.24
CDK5RAP3-234ENST00000584525 IGF2BP3O00425 579 aaKnown RBP eCLIP16.55■□□□□ 0.24
CDK5RAP3-234ENST00000584525 IREB2P48200 963 aaKnown RBP16.55■□□□□ 0.24
CDK5RAP3-234ENST00000584525 OTUD7BQ6GQQ9 843 aa16.55■□□□□ 0.24
CDK5RAP3-234ENST00000584525 OTOP1Q7RTM1 612 aa16.55■□□□□ 0.24
CDK5RAP3-234ENST00000584525 UNCXA6NJT0 531 aa16.54■□□□□ 0.24
CDK5RAP3-234ENST00000584525 F6X3S4 739 aa16.54■□□□□ 0.24
CDK5RAP3-234ENST00000584525 FKBP1AP62942 108 aaKnown RBP16.54■□□□□ 0.24
CDK5RAP3-234ENST00000584525 RASA3Q14644 834 aa16.54■□□□□ 0.24
CDK5RAP3-234ENST00000584525 CCDC57Q2TAC2 916 aa16.54■□□□□ 0.24
CDK5RAP3-234ENST00000584525 LMBR1LQ6UX01 489 aa16.54■□□□□ 0.24
CDK5RAP3-234ENST00000584525 LDHAL6AQ6ZMR3 332 aa16.54■□□□□ 0.24
CDK5RAP3-234ENST00000584525 CDCA7LQ96GN5 454 aa16.54■□□□□ 0.24
CDK5RAP3-234ENST00000584525 CNNM1Q9NRU3 951 aa16.54■□□□□ 0.24
CDK5RAP3-234ENST00000584525 AOX1Q06278 1338 aa16.53■□□□□ 0.24
CDK5RAP3-234ENST00000584525 USP2O75604 605 aaPredicted RBP16.53■□□□□ 0.24
CDK5RAP3-234ENST00000584525 INTS3Q68E01 1043 aaKnown RBP16.53■□□□□ 0.24
CDK5RAP3-234ENST00000584525 ERO1AQ96HE7 468 aa16.53■□□□□ 0.24
CDK5RAP3-234ENST00000584525 ZNF594Q96JF6 807 aaPredicted RBP16.53■□□□□ 0.24
CDK5RAP3-234ENST00000584525 SSC5DA1L4H1 1573 aa16.52■□□□□ 0.24
CDK5RAP3-234ENST00000584525 GJA5P36382 358 aa16.52■□□□□ 0.24
CDK5RAP3-234ENST00000584525 CRHR2Q13324 411 aa16.52■□□□□ 0.24
CDK5RAP3-234ENST00000584525 BEND3Q5T5X7 828 aa16.52■□□□□ 0.24
CDK5RAP3-234ENST00000584525 ANKRD13AQ8IZ07 590 aa16.52■□□□□ 0.24
CDK5RAP3-234ENST00000584525 CD99L2Q8TCZ2 262 aa16.52■□□□□ 0.24
CDK5RAP3-234ENST00000584525 CT47B1P0C2W7 299 aaPredicted RBP16.51■□□□□ 0.23
CDK5RAP3-234ENST00000584525 EPHA10Q5JZY3 1008 aa16.51■□□□□ 0.23
CDK5RAP3-234ENST00000584525 ELP3Q9H9T3 547 aa16.51■□□□□ 0.23
CDK5RAP3-234ENST00000584525 SMC4Q9NTJ3 1288 aa16.51■□□□□ 0.23
CDK5RAP3-234ENST00000584525 POTEFA5A3E0 1075 aa16.5■□□□□ 0.23
CDK5RAP3-234ENST00000584525 GRM8O00222 908 aa16.5■□□□□ 0.23
CDK5RAP3-234ENST00000584525 TNFAIP1Q13829 316 aa16.5■□□□□ 0.23
CDK5RAP3-234ENST00000584525 MFSD14BQ5SR56 506 aa16.5■□□□□ 0.23
CDK5RAP3-234ENST00000584525 GCC1Q96CN9 775 aa16.5■□□□□ 0.23
CDK5RAP3-234ENST00000584525 OPTNQ96CV9 577 aa16.5■□□□□ 0.23
CDK5RAP3-234ENST00000584525 PTPN18Q99952 460 aa16.5■□□□□ 0.23
CDK5RAP3-234ENST00000584525 EFCC1Q9HA90 598 aa16.5■□□□□ 0.23
CDK5RAP3-234ENST00000584525 C9orf78Q9NZ63 289 aaPredicted RBP16.5■□□□□ 0.23
CDK5RAP3-234ENST00000584525 ZNF70Q9UC06 446 aaPredicted RBP16.5■□□□□ 0.23
CDK5RAP3-234ENST00000584525 TTF2Q9UNY4 1162 aaKnown RBP16.5■□□□□ 0.23
CDK5RAP3-234ENST00000584525 PTPN22Q9Y2R2 807 aa16.5■□□□□ 0.23
CDK5RAP3-234ENST00000584525 FAM205AQ6ZU69 1335 aa16.49■□□□□ 0.23
CDK5RAP3-234ENST00000584525 HIBADHP31937 336 aaKnown RBP16.49■□□□□ 0.23
CDK5RAP3-234ENST00000584525 GYG1P46976 350 aa16.49■□□□□ 0.23
CDK5RAP3-234ENST00000584525 SP3Q02447 781 aa16.49■□□□□ 0.23
CDK5RAP3-234ENST00000584525 SPDYE2Q495Y8 402 aa16.49■□□□□ 0.23
CDK5RAP3-234ENST00000584525 TDRD3Q9H7E2 651 aaKnown RBP16.49■□□□□ 0.23
CDK5RAP3-234ENST00000584525 SERPINA10Q9UK55 444 aa16.49■□□□□ 0.23
CDK5RAP3-234ENST00000584525 SPEF2Q9C093 1822 aa16.49■□□□□ 0.23
CDK5RAP3-234ENST00000584525 ZBED9Q6R2W3 1325 aa16.48■□□□□ 0.23
CDK5RAP3-234ENST00000584525 TESPA1A2RU30 521 aaPredicted RBP16.48■□□□□ 0.23
CDK5RAP3-234ENST00000584525 ALDH1L2Q3SY69 923 aa16.48■□□□□ 0.23
CDK5RAP3-234ENST00000584525 SLC4A10Q6U841 1118 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms