RNA–Protein interactions for RNA: ENST00000584250.1

TTC39C-209, Transcript of tetratricopeptide repeat domain 39C, humanhuman

TSL 1 (best) BASIC

Gene TTC39C, Length 1,048 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39C-209ENST00000584250 LPIN2Q92539 896 aa30.9■■■□□ 2.54
TTC39C-209ENST00000584250 FAM205AQ6ZU69 1335 aa30.9■■■□□ 2.54
TTC39C-209ENST00000584250 SLC5A1P13866 664 aa30.89■■■□□ 2.54
TTC39C-209ENST00000584250 TFCP2Q12800 502 aa30.89■■■□□ 2.54
TTC39C-209ENST00000584250 SCARF1Q14162 830 aa30.89■■■□□ 2.54
TTC39C-209ENST00000584250 ATP2B3Q16720 1220 aa30.89■■■□□ 2.54
TTC39C-209ENST00000584250 F8W031 263 aaPredicted RBP30.88■■■□□ 2.53
TTC39C-209ENST00000584250 ADORA1P30542 326 aa30.88■■■□□ 2.53
TTC39C-209ENST00000584250 NBPF9Q3BBW0 867 aa30.88■■■□□ 2.53
TTC39C-209ENST00000584250 USP48Q86UV5 1035 aa30.88■■■□□ 2.53
TTC39C-209ENST00000584250 VPS37DQ86XT2 251 aa30.88■■■□□ 2.53
TTC39C-209ENST00000584250 SSH3Q8TE77 659 aa30.88■■■□□ 2.53
TTC39C-209ENST00000584250 GGA3Q9NZ52 723 aa30.88■■■□□ 2.53
TTC39C-209ENST00000584250 PCDHAC2Q9Y5I4 1007 aa30.88■■■□□ 2.53
TTC39C-209ENST00000584250 MS4A1P11836 297 aa30.87■■■□□ 2.53
TTC39C-209ENST00000584250 GRIK5Q16478 980 aa30.87■■■□□ 2.53
TTC39C-209ENST00000584250 CAVIN4Q5BKX8 364 aa30.87■■■□□ 2.53
TTC39C-209ENST00000584250 SCAF8Q9UPN6 1271 aaKnown RBP30.87■■■□□ 2.53
TTC39C-209ENST00000584250 CHAF1AQ13111 956 aaPredicted RBP30.86■■■□□ 2.53
TTC39C-209ENST00000584250 CEP85Q6P2H3 762 aa30.86■■■□□ 2.53
TTC39C-209ENST00000584250 CREBZFQ9NS37 354 aa30.86■■■□□ 2.53
TTC39C-209ENST00000584250 ADM5C9JUS6 153 aa30.85■■■□□ 2.53
TTC39C-209ENST00000584250 TIMM10P62072 90 aa30.85■■■□□ 2.53
TTC39C-209ENST00000584250 ANGEL2Q5VTE6 544 aaKnown RBP30.85■■■□□ 2.53
TTC39C-209ENST00000584250 CST9Q5W186 159 aa30.85■■■□□ 2.53
TTC39C-209ENST00000584250 OGFOD1Q8N543 542 aa30.85■■■□□ 2.53
TTC39C-209ENST00000584250 TMEM88BA6NKF7 163 aa30.84■■■□□ 2.53
TTC39C-209ENST00000584250 MFSD14BQ5SR56 506 aa30.84■■■□□ 2.53
TTC39C-209ENST00000584250 CDC37L1Q7L3B6 337 aa30.84■■■□□ 2.53
TTC39C-209ENST00000584250 TRPM7Q96QT4 1865 aa30.84■■■□□ 2.53
TTC39C-209ENST00000584250 COL1A1P02452 1464 aaPredicted RBP30.83■■■□□ 2.53
TTC39C-209ENST00000584250 WNT10BO00744 389 aa30.83■■■□□ 2.53
TTC39C-209ENST00000584250 FKBP1AP62942 108 aaKnown RBP30.83■■■□□ 2.53
TTC39C-209ENST00000584250 KRT26Q7Z3Y9 468 aa30.83■■■□□ 2.53
TTC39C-209ENST00000584250 ARAP2Q8WZ64 1704 aa30.82■■■□□ 2.52
TTC39C-209ENST00000584250 AOX1Q06278 1338 aa30.82■■■□□ 2.52
TTC39C-209ENST00000584250 PHKA1P46020 1223 aa30.82■■■□□ 2.52
TTC39C-209ENST00000584250 DCPSQ96C86 337 aaKnown RBP30.82■■■□□ 2.52
TTC39C-209ENST00000584250 ZBED3Q96IU2 234 aaPredicted RBP30.82■■■□□ 2.52
TTC39C-209ENST00000584250 ZBTB40Q9NUA8 1239 aa30.82■■■□□ 2.52
TTC39C-209ENST00000584250 DDX19BQ9UMR2 479 aa30.82■■■□□ 2.52
TTC39C-209ENST00000584250 FRAT2O75474 233 aaPredicted RBP30.81■■■□□ 2.52
TTC39C-209ENST00000584250 G3BP1Q13283 466 aaKnown RBP eCLIP30.81■■■□□ 2.52
TTC39C-209ENST00000584250 KLRG1Q96E93 195 aa30.81■■■□□ 2.52
TTC39C-209ENST00000584250 A0A1B0GUL7 405 aa30.8■■■□□ 2.52
TTC39C-209ENST00000584250 PDE3AQ14432 1141 aa30.8■■■□□ 2.52
TTC39C-209ENST00000584250 MKRN1Q9UHC7 482 aaKnown RBP30.8■■■□□ 2.52
TTC39C-209ENST00000584250 HDAC9Q9UKV0 1011 aa30.8■■■□□ 2.52
TTC39C-209ENST00000584250 SURF6O75683 361 aaKnown RBP30.79■■■□□ 2.52
TTC39C-209ENST00000584250 ZNF408Q9H9D4 720 aa30.79■■■□□ 2.52
TTC39C-209ENST00000584250 MYH13Q9UKX3 1938 aa30.79■■■□□ 2.52
TTC39C-209ENST00000584250 CELF2O95319 508 aaKnown RBP30.78■■■□□ 2.52
TTC39C-209ENST00000584250 GOLGA6L2Q8N9W4 650 aaPredicted RBP30.78■■■□□ 2.52
TTC39C-209ENST00000584250 CFAP100Q494V2 611 aa30.77■■■□□ 2.52
TTC39C-209ENST00000584250 SIRT2Q8IXJ6 389 aa30.77■■■□□ 2.52
TTC39C-209ENST00000584250 XAGE2Q96GT9 111 aa30.77■■■□□ 2.52
TTC39C-209ENST00000584250 TTF2Q9UNY4 1162 aaKnown RBP30.77■■■□□ 2.52
TTC39C-209ENST00000584250 CCDC102BQ68D86 513 aa30.76■■■□□ 2.51
TTC39C-209ENST00000584250 NOP58Q9Y2X3 529 aaKnown RBP30.76■■■□□ 2.51
TTC39C-209ENST00000584250 DLGAP5Q15398 846 aa30.75■■■□□ 2.51
TTC39C-209ENST00000584250 SULF1Q8IWU6 871 aa30.75■■■□□ 2.51
TTC39C-209ENST00000584250 PRMT6Q96LA8 375 aaPredicted RBP30.75■■■□□ 2.51
TTC39C-209ENST00000584250 NEUROD6Q96NK8 337 aa30.75■■■□□ 2.51
TTC39C-209ENST00000584250 AKAP2Q9Y2D5 859 aa30.75■■■□□ 2.51
TTC39C-209ENST00000584250 OS9Q13438 667 aaPredicted RBP30.74■■■□□ 2.51
TTC39C-209ENST00000584250 PRAMEF18Q5VWM3 479 aa30.74■■■□□ 2.51
TTC39C-209ENST00000584250 ABT1Q9ULW3 272 aaKnown RBP30.74■■■□□ 2.51
TTC39C-209ENST00000584250 MMP14P50281 582 aa30.73■■■□□ 2.51
TTC39C-209ENST00000584250 MTMR14Q8NCE2 650 aa30.73■■■□□ 2.51
TTC39C-209ENST00000584250 EXOC6BQ9Y2D4 811 aa30.73■■■□□ 2.51
TTC39C-209ENST00000584250 CNTNAP1P78357 1384 aa30.73■■■□□ 2.51
TTC39C-209ENST00000584250 PITPNM2Q9BZ72 1349 aa30.73■■■□□ 2.51
TTC39C-209ENST00000584250 SPDYE2BA6NHP3 402 aa30.72■■■□□ 2.51
TTC39C-209ENST00000584250 SPDYE6P0CI01 402 aa30.72■■■□□ 2.51
TTC39C-209ENST00000584250 RRP1P56182 461 aaKnown RBP30.72■■■□□ 2.51
TTC39C-209ENST00000584250 CDCA5Q96FF9 252 aa30.72■■■□□ 2.51
TTC39C-209ENST00000584250 CLRN2A0PK11 232 aa30.71■■■□□ 2.51
TTC39C-209ENST00000584250 RBM5P52756 815 aaKnown RBP eCLIP30.71■■■□□ 2.51
TTC39C-209ENST00000584250 RASGRF1Q13972 1273 aa30.71■■■□□ 2.51
TTC39C-209ENST00000584250 TBC1D22AQ8WUA7 517 aa30.71■■■□□ 2.51
TTC39C-209ENST00000584250 TNNI3KQ59H18 835 aa30.7■■■□□ 2.51
TTC39C-209ENST00000584250 GNL3LQ9NVN8 582 aaKnown RBP30.7■■■□□ 2.51
TTC39C-209ENST00000584250 FPGT-TNNI3KV9GXZ4 949 aa30.7■■■□□ 2.51
TTC39C-209ENST00000584250 RASSF10A6NK89 507 aa30.69■■■□□ 2.5
TTC39C-209ENST00000584250 CRKP46108 304 aa30.69■■■□□ 2.5
TTC39C-209ENST00000584250 TLL2Q9Y6L7 1015 aa30.69■■■□□ 2.5
TTC39C-209ENST00000584250 ECM29Q5VYK3 1845 aa30.68■■■□□ 2.5
TTC39C-209ENST00000584250 VEGFBP49765 207 aa30.68■■■□□ 2.5
TTC39C-209ENST00000584250 PI16Q6UXB8 463 aa30.68■■■□□ 2.5
TTC39C-209ENST00000584250 RPAP2Q8IXW5 612 aaPredicted RBP30.68■■■□□ 2.5
TTC39C-209ENST00000584250 WDR66Q8TBY9 1149 aa30.68■■■□□ 2.5
TTC39C-209ENST00000584250 DBNDD2Q9BQY9 259 aa30.68■■■□□ 2.5
TTC39C-209ENST00000584250 PRDX5P30044 214 aa30.67■■■□□ 2.5
TTC39C-209ENST00000584250 DEFB115Q30KQ5 88 aa30.67■■■□□ 2.5
TTC39C-209ENST00000584250 SAPCD2Q86UD0 394 aa30.67■■■□□ 2.5
TTC39C-209ENST00000584250 JMYQ8N9B5 988 aa30.67■■■□□ 2.5
TTC39C-209ENST00000584250 SERPINA10Q9UK55 444 aa30.67■■■□□ 2.5
TTC39C-209ENST00000584250 DENND2AQ9ULE3 1009 aa30.67■■■□□ 2.5
TTC39C-209ENST00000584250 TDRD3Q9H7E2 651 aaKnown RBP30.66■■■□□ 2.5
TTC39C-209ENST00000584250 GPR108Q9NPR9 543 aa30.66■■■□□ 2.5
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms