RNA–Protein interactions for RNA: ENST00000584112.1

CCDC47-206, Transcript of coiled-coil domain containing 47, humanhuman

TSL 2

Gene CCDC47, Length 588 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-206ENST00000584112 ARHGEF6Q15052 776 aa14.36□□□□□ -0.11
CCDC47-206ENST00000584112 WASHC4Q2M389 1173 aa14.36□□□□□ -0.11
CCDC47-206ENST00000584112 U2AF1L4Q8WU68 220 aaKnown RBP14.36□□□□□ -0.11
CCDC47-206ENST00000584112 MYLIPQ8WY64 445 aa14.36□□□□□ -0.11
CCDC47-206ENST00000584112 UBE2OQ9C0C9 1292 aaKnown RBP14.36□□□□□ -0.11
CCDC47-206ENST00000584112 SH3TC1Q8TE82 1336 aa14.36□□□□□ -0.11
CCDC47-206ENST00000584112 ANP32CO43423 234 aa14.35□□□□□ -0.11
CCDC47-206ENST00000584112 NBPF9Q3BBW0 867 aa14.35□□□□□ -0.11
CCDC47-206ENST00000584112 MYOZ2Q9NPC6 264 aa14.35□□□□□ -0.11
CCDC47-206ENST00000584112 ZBTB48P10074 688 aaPredicted RBP14.34□□□□□ -0.11
CCDC47-206ENST00000584112 GOLGA2Q08379 1002 aa14.34□□□□□ -0.11
CCDC47-206ENST00000584112 OTUD7BQ6GQQ9 843 aa14.34□□□□□ -0.11
CCDC47-206ENST00000584112 SSC5DA1L4H1 1573 aa14.34□□□□□ -0.11
CCDC47-206ENST00000584112 BBOX1O75936 387 aa14.33□□□□□ -0.12
CCDC47-206ENST00000584112 HCLS1P14317 486 aaPredicted RBP14.33□□□□□ -0.12
CCDC47-206ENST00000584112 CCDC27Q2M243 656 aa14.33□□□□□ -0.12
CCDC47-206ENST00000584112 CCDC184Q52MB2 194 aa14.33□□□□□ -0.12
CCDC47-206ENST00000584112 DDX46Q7L014 1031 aaKnown RBP14.33□□□□□ -0.12
CCDC47-206ENST00000584112 ISCA1Q9BUE6 129 aa14.33□□□□□ -0.12
CCDC47-206ENST00000584112 ELL2O00472 640 aaPredicted RBP14.32□□□□□ -0.12
CCDC47-206ENST00000584112 ZNF697Q5TEC3 545 aa14.32□□□□□ -0.12
CCDC47-206ENST00000584112 CCDC30Q5VVM6 783 aa14.32□□□□□ -0.12
CCDC47-206ENST00000584112 RIC3Q7Z5B4 369 aa14.32□□□□□ -0.12
CCDC47-206ENST00000584112 USP38Q8NB14 1042 aa14.32□□□□□ -0.12
CCDC47-206ENST00000584112 MRS2Q9HD23 443 aa14.32□□□□□ -0.12
CCDC47-206ENST00000584112 TRIM28Q13263 835 aaKnown RBP14.31□□□□□ -0.12
CCDC47-206ENST00000584112 TAF1CQ15572 869 aaPredicted RBP14.31□□□□□ -0.12
CCDC47-206ENST00000584112 TMC4Q7Z404 712 aa14.31□□□□□ -0.12
CCDC47-206ENST00000584112 DIS3LQ8TF46 1054 aaKnown RBP14.31□□□□□ -0.12
CCDC47-206ENST00000584112 PAWRQ96IZ0 340 aaKnown RBP14.31□□□□□ -0.12
CCDC47-206ENST00000584112 UNC93B1Q9H1C4 597 aa14.31□□□□□ -0.12
CCDC47-206ENST00000584112 HCN4Q9Y3Q4 1203 aa14.31□□□□□ -0.12
CCDC47-206ENST00000584112 ARIH1Q9Y4X5 557 aaPredicted RBP14.31□□□□□ -0.12
CCDC47-206ENST00000584112 SPEF2Q9C093 1822 aa14.31□□□□□ -0.12
CCDC47-206ENST00000584112 ATP5J2-PTCD1G3V325 749 aa14.3□□□□□ -0.12
CCDC47-206ENST00000584112 DDX58O95786 925 aaKnown RBP14.3□□□□□ -0.12
CCDC47-206ENST00000584112 HSP90B1P14625 803 aaKnown RBP14.3□□□□□ -0.12
CCDC47-206ENST00000584112 GRK4P32298 578 aa14.3□□□□□ -0.12
CCDC47-206ENST00000584112 GRAPQ13588 217 aa14.3□□□□□ -0.12
CCDC47-206ENST00000584112 C8orf58Q8NAV2 365 aa14.3□□□□□ -0.12
CCDC47-206ENST00000584112 GRAPLQ8TC17 118 aaPredicted RBP14.3□□□□□ -0.12
CCDC47-206ENST00000584112 BIN2Q9UBW5 565 aaPredicted RBP14.3□□□□□ -0.12
CCDC47-206ENST00000584112 POLLQ9UGP5 575 aa14.3□□□□□ -0.12
CCDC47-206ENST00000584112 C6orf229H3BNL8 230 aa14.29□□□□□ -0.12
CCDC47-206ENST00000584112 SGPL1O95470 568 aa14.29□□□□□ -0.12
CCDC47-206ENST00000584112 CTGFP29279 349 aa14.29□□□□□ -0.12
CCDC47-206ENST00000584112 LACTBP83111 547 aaPredicted RBP14.29□□□□□ -0.12
CCDC47-206ENST00000584112 MAPK8IP2Q13387 824 aaPredicted RBP14.29□□□□□ -0.12
CCDC47-206ENST00000584112 RSBN1LQ6PCB5 846 aaPredicted RBP14.29□□□□□ -0.12
CCDC47-206ENST00000584112 WWC1Q8IX03 1113 aa14.29□□□□□ -0.12
CCDC47-206ENST00000584112 FAM89AQ96GI7 184 aa14.29□□□□□ -0.12
CCDC47-206ENST00000584112 PHAXQ9H814 394 aaKnown RBP14.29□□□□□ -0.12
CCDC47-206ENST00000584112 RIPOR2Q9Y4F9 1068 aa14.29□□□□□ -0.12
CCDC47-206ENST00000584112 IL16Q14005 1332 aa14.29□□□□□ -0.12
CCDC47-206ENST00000584112 TESPA1A2RU30 521 aaPredicted RBP14.28□□□□□ -0.12
CCDC47-206ENST00000584112 COL2A1P02458 1487 aaPredicted RBP14.28□□□□□ -0.12
CCDC47-206ENST00000584112 USP17L8P0C7I0 530 aa14.28□□□□□ -0.12
CCDC47-206ENST00000584112 STK31Q9BXU1 1019 aa14.28□□□□□ -0.12
CCDC47-206ENST00000584112 SEMA6BQ9H3T3 888 aa14.28□□□□□ -0.12
CCDC47-206ENST00000584112 ZFYVE28Q9HCC9 887 aa14.28□□□□□ -0.12
CCDC47-206ENST00000584112 PSME4Q14997 1843 aa14.27□□□□□ -0.12
CCDC47-206ENST00000584112 IRS4O14654 1257 aaPredicted RBP14.27□□□□□ -0.13
CCDC47-206ENST00000584112 TFRCP02786 760 aaKnown RBP14.27□□□□□ -0.13
CCDC47-206ENST00000584112 FOSL2P15408 326 aa14.27□□□□□ -0.13
CCDC47-206ENST00000584112 SF3B3Q15393 1217 aaKnown RBP14.27□□□□□ -0.13
CCDC47-206ENST00000584112 ZBTB38Q8NAP3 1195 aaPredicted RBP14.27□□□□□ -0.13
CCDC47-206ENST00000584112 CCDC191Q8NCU4 936 aa14.27□□□□□ -0.13
CCDC47-206ENST00000584112 ADAMTS19Q8TE59 1207 aa14.27□□□□□ -0.13
CCDC47-206ENST00000584112 TSR2Q969E8 191 aaKnown RBP14.27□□□□□ -0.13
CCDC47-206ENST00000584112 ZNF428Q96B54 188 aa14.27□□□□□ -0.13
CCDC47-206ENST00000584112 GMLQ99445 158 aa14.27□□□□□ -0.13
CCDC47-206ENST00000584112 NSFL1CQ9UNZ2 370 aaKnown RBP14.27□□□□□ -0.13
CCDC47-206ENST00000584112 CACNA1GO43497 2377 aa14.26□□□□□ -0.13
CCDC47-206ENST00000584112 KIF22Q14807 665 aa14.26□□□□□ -0.13
CCDC47-206ENST00000584112 RTL5Q5HYW3 569 aaPredicted RBP14.26□□□□□ -0.13
CCDC47-206ENST00000584112 TSPYL6Q8N831 410 aa14.26□□□□□ -0.13
CCDC47-206ENST00000584112 AGBL3Q8NEM8 1001 aa14.26□□□□□ -0.13
CCDC47-206ENST00000584112 RAET1EQ8TD07 263 aa14.26□□□□□ -0.13
CCDC47-206ENST00000584112 BRI3BPQ8WY22 251 aa14.26□□□□□ -0.13
CCDC47-206ENST00000584112 P2RX7Q99572 595 aaKnown RBP14.26□□□□□ -0.13
CCDC47-206ENST00000584112 MYD88Q99836 296 aa14.26□□□□□ -0.13
CCDC47-206ENST00000584112 LRFN3Q9BTN0 628 aa14.26□□□□□ -0.13
CCDC47-206ENST00000584112 METTL22Q9BUU2 404 aaPredicted RBP14.26□□□□□ -0.13
CCDC47-206ENST00000584112 GPSM2P81274 684 aa14.25□□□□□ -0.13
CCDC47-206ENST00000584112 TWISTNBQ3B726 338 aaPredicted RBP14.25□□□□□ -0.13
CCDC47-206ENST00000584112 FAM43AQ8N2R8 423 aa14.25□□□□□ -0.13
CCDC47-206ENST00000584112 CWC25Q9NXE8 425 aaPredicted RBP14.25□□□□□ -0.13
CCDC47-206ENST00000584112 SRRDQ9UH36 339 aa14.25□□□□□ -0.13
CCDC47-206ENST00000584112 COL4A1P02462 1669 aa14.24□□□□□ -0.13
CCDC47-206ENST00000584112 WNT10BO00744 389 aa14.24□□□□□ -0.13
CCDC47-206ENST00000584112 SASH1O94885 1247 aa14.24□□□□□ -0.13
CCDC47-206ENST00000584112 PCCAP05165 728 aaPredicted RBP14.24□□□□□ -0.13
CCDC47-206ENST00000584112 MRE11P49959 708 aa14.24□□□□□ -0.13
CCDC47-206ENST00000584112 PRMT2P55345 433 aa14.24□□□□□ -0.13
CCDC47-206ENST00000584112 MDM2Q00987 491 aaPredicted RBP14.24□□□□□ -0.13
CCDC47-206ENST00000584112 NEXNQ0ZGT2 675 aa14.24□□□□□ -0.13
CCDC47-206ENST00000584112 MS4A4AQ96JQ5 239 aa14.24□□□□□ -0.13
CCDC47-206ENST00000584112 TRIM47Q96LD4 638 aa14.24□□□□□ -0.13
CCDC47-206ENST00000584112 DEFB118Q96PH6 123 aa14.24□□□□□ -0.13
CCDC47-206ENST00000584112 UHRF1Q96T88 793 aaPredicted RBP14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms