RNA–Protein interactions for RNA: ENST00000583965.5

CDRT1-207, CMT1A duplicated region transcript 1, humanhuman

TSL 1 (best) BASIC

Gene CDRT1, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-207ENST00000583965 ECE2O60344 883 aa14.22□□□□□ -0.13
CDRT1-207ENST00000583965 FRAT2O75474 233 aaPredicted RBP14.22□□□□□ -0.13
CDRT1-207ENST00000583965 PI4K2BQ8TCG2 481 aa14.22□□□□□ -0.13
CDRT1-207ENST00000583965 DBNDD1Q9H9R9 158 aa14.22□□□□□ -0.13
CDRT1-207ENST00000583965 MAST2Q6P0Q8 1798 aa14.22□□□□□ -0.13
CDRT1-207ENST00000583965 UTRNP46939 3433 aa14.21□□□□□ -0.13
CDRT1-207ENST00000583965 MCAMP43121 646 aa14.21□□□□□ -0.13
CDRT1-207ENST00000583965 RASGRF1Q13972 1273 aa14.21□□□□□ -0.13
CDRT1-207ENST00000583965 DOK7Q18PE1 504 aa14.21□□□□□ -0.13
CDRT1-207ENST00000583965 HAUS7Q99871 368 aa14.21□□□□□ -0.13
CDRT1-207ENST00000583965 FAM205AQ6ZU69 1335 aa14.2□□□□□ -0.14
CDRT1-207ENST00000583965 PRELPP51888 382 aa14.2□□□□□ -0.14
CDRT1-207ENST00000583965 TSHZ3Q63HK5 1081 aa14.2□□□□□ -0.14
CDRT1-207ENST00000583965 SPATA5Q8NB90 893 aa14.2□□□□□ -0.14
CDRT1-207ENST00000583965 WDR66Q8TBY9 1149 aa14.2□□□□□ -0.14
CDRT1-207ENST00000583965 BOLA2Q9H3K6 86 aa14.2□□□□□ -0.14
CDRT1-207ENST00000583965 HMG20BQ9P0W2 317 aa14.2□□□□□ -0.14
CDRT1-207ENST00000583965 ZNRF3Q9ULT6 936 aa14.2□□□□□ -0.14
CDRT1-207ENST00000583965 COL1A1P02452 1464 aaPredicted RBP14.19□□□□□ -0.14
CDRT1-207ENST00000583965 ZC3H4Q9UPT8 1303 aaKnown RBP14.19□□□□□ -0.14
CDRT1-207ENST00000583965 IGSF3O75054 1194 aa14.19□□□□□ -0.14
CDRT1-207ENST00000583965 RGS3P49796 1198 aa14.19□□□□□ -0.14
CDRT1-207ENST00000583965 SCARF1Q14162 830 aa14.19□□□□□ -0.14
CDRT1-207ENST00000583965 TTC22Q5TAA0 569 aa14.19□□□□□ -0.14
CDRT1-207ENST00000583965 ZGPATQ8N5A5 531 aaKnown RBP14.19□□□□□ -0.14
CDRT1-207ENST00000583965 TBC1D22AQ8WUA7 517 aa14.19□□□□□ -0.14
CDRT1-207ENST00000583965 IQSEC3Q9UPP2 1182 aaPredicted RBP14.19□□□□□ -0.14
CDRT1-207ENST00000583965 SALL1Q9NSC2 1324 aa14.18□□□□□ -0.14
CDRT1-207ENST00000583965 USP17L3A6NCW0 530 aa14.18□□□□□ -0.14
CDRT1-207ENST00000583965 USP17L4A6NCW7 530 aa14.18□□□□□ -0.14
CDRT1-207ENST00000583965 YDJCA8MPS7 323 aa14.18□□□□□ -0.14
CDRT1-207ENST00000583965 FZD9O00144 591 aa14.18□□□□□ -0.14
CDRT1-207ENST00000583965 FKBP1AP62942 108 aaKnown RBP14.18□□□□□ -0.14
CDRT1-207ENST00000583965 TTF1Q15361 905 aaPredicted RBP14.18□□□□□ -0.14
CDRT1-207ENST00000583965 STRIP1Q5VSL9 837 aa14.18□□□□□ -0.14
CDRT1-207ENST00000583965 TTLL5Q6EMB2 1281 aa14.18□□□□□ -0.14
CDRT1-207ENST00000583965 USP17L1Q7RTZ2 530 aa14.18□□□□□ -0.14
CDRT1-207ENST00000583965 RNF181Q9P0P0 153 aa14.18□□□□□ -0.14
CDRT1-207ENST00000583965 ZAP70P43403 619 aa14.17□□□□□ -0.14
CDRT1-207ENST00000583965 EIF6P56537 245 aaKnown RBP14.17□□□□□ -0.14
CDRT1-207ENST00000583965 GTF2IP78347 998 aa14.17□□□□□ -0.14
CDRT1-207ENST00000583965 CHAF1AQ13111 956 aaPredicted RBP14.17□□□□□ -0.14
CDRT1-207ENST00000583965 C9orf131Q5VYM1 1079 aa14.17□□□□□ -0.14
CDRT1-207ENST00000583965 SKAP1Q86WV1 359 aa14.17□□□□□ -0.14
CDRT1-207ENST00000583965 TICAM2Q86XR7 235 aa14.17□□□□□ -0.14
CDRT1-207ENST00000583965 DNAJC2Q99543 621 aaKnown RBP14.17□□□□□ -0.14
CDRT1-207ENST00000583965 PAG1Q9NWQ8 432 aa14.17□□□□□ -0.14
CDRT1-207ENST00000583965 SUGT1Q9Y2Z0 365 aa14.17□□□□□ -0.14
CDRT1-207ENST00000583965 MYO3BQ8WXR4 1341 aa14.16□□□□□ -0.14
CDRT1-207ENST00000583965 ECM29Q5VYK3 1845 aa14.16□□□□□ -0.14
CDRT1-207ENST00000583965 CYP2E1P05181 493 aaPredicted RBP14.16□□□□□ -0.14
CDRT1-207ENST00000583965 TNIP1Q15025 636 aa14.16□□□□□ -0.14
CDRT1-207ENST00000583965 SPTY2D1Q68D10 685 aaPredicted RBP14.16□□□□□ -0.14
CDRT1-207ENST00000583965 CIAPIN1Q6FI81 312 aa14.16□□□□□ -0.14
CDRT1-207ENST00000583965 PI16Q6UXB8 463 aa14.16□□□□□ -0.14
CDRT1-207ENST00000583965 CNTROBQ8N137 903 aa14.16□□□□□ -0.14
CDRT1-207ENST00000583965 EVI5LQ96CN4 794 aa14.16□□□□□ -0.14
CDRT1-207ENST00000583965 SNRKQ9NRH2 765 aa14.16□□□□□ -0.14
CDRT1-207ENST00000583965 GOLIM4O00461 696 aa14.15□□□□□ -0.14
CDRT1-207ENST00000583965 VIL1P09327 827 aaKnown RBP14.15□□□□□ -0.14
CDRT1-207ENST00000583965 CXCL9Q07325 125 aa14.15□□□□□ -0.14
CDRT1-207ENST00000583965 BMP2KLQ5H9B9 411 aa14.15□□□□□ -0.14
CDRT1-207ENST00000583965 MFSD14BQ5SR56 506 aa14.15□□□□□ -0.14
CDRT1-207ENST00000583965 DACT2Q5SW24 774 aa14.15□□□□□ -0.14
CDRT1-207ENST00000583965 TMED8Q6PL24 325 aaPredicted RBP14.15□□□□□ -0.14
CDRT1-207ENST00000583965 FBXW7Q969H0 707 aa14.15□□□□□ -0.14
CDRT1-207ENST00000583965 SCN4AP35499 1836 aa14.15□□□□□ -0.14
CDRT1-207ENST00000583965 RFX7Q2KHR2 1363 aa14.14□□□□□ -0.15
CDRT1-207ENST00000583965 TRIM6-TRIM34B2RNG4 842 aa14.14□□□□□ -0.15
CDRT1-207ENST00000583965 PSMD14O00487 310 aa14.14□□□□□ -0.15
CDRT1-207ENST00000583965 RAD17O75943 681 aa14.14□□□□□ -0.15
CDRT1-207ENST00000583965 GSPT1P15170 499 aaKnown RBP14.14□□□□□ -0.15
CDRT1-207ENST00000583965 MMP14P50281 582 aa14.14□□□□□ -0.15
CDRT1-207ENST00000583965 LRRFIP1Q32MZ4 808 aaKnown RBP14.14□□□□□ -0.15
CDRT1-207ENST00000583965 ERICH6Q7L0X2 663 aa14.14□□□□□ -0.15
CDRT1-207ENST00000583965 KBTBD3Q8NAB2 608 aa14.14□□□□□ -0.15
CDRT1-207ENST00000583965 KCNQ5Q9NR82 932 aa14.14□□□□□ -0.15
CDRT1-207ENST00000583965 NDUFB9Q9Y6M9 179 aa14.14□□□□□ -0.15
CDRT1-207ENST00000583965 MAST3O60307 1309 aa14.14□□□□□ -0.15
CDRT1-207ENST00000583965 CDK5RAP2Q96SN8 1893 aa14.13□□□□□ -0.15
CDRT1-207ENST00000583965 LDHBP07195 334 aaKnown RBP14.13□□□□□ -0.15
CDRT1-207ENST00000583965 RPS12P25398 132 aaKnown RBP14.13□□□□□ -0.15
CDRT1-207ENST00000583965 MAP3K12Q12852 859 aa14.13□□□□□ -0.15
CDRT1-207ENST00000583965 RSBN1LQ6PCB5 846 aaPredicted RBP14.13□□□□□ -0.15
CDRT1-207ENST00000583965 AGBL3Q8NEM8 1001 aa14.13□□□□□ -0.15
CDRT1-207ENST00000583965 RILPL2Q969X0 211 aa14.13□□□□□ -0.15
CDRT1-207ENST00000583965 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.13□□□□□ -0.15
CDRT1-207ENST00000583965 ANTXR1Q9H6X2 564 aa14.13□□□□□ -0.15
CDRT1-207ENST00000583965 LRP2BPQ9P2M1 347 aa14.13□□□□□ -0.15
CDRT1-207ENST00000583965 ABCF2Q9UG63 623 aa14.13□□□□□ -0.15
CDRT1-207ENST00000583965 JAG2Q9Y219 1238 aa14.13□□□□□ -0.15
CDRT1-207ENST00000583965 MAP4K4O95819 1239 aaPredicted RBP14.12□□□□□ -0.15
CDRT1-207ENST00000583965 SDSP20132 328 aa14.12□□□□□ -0.15
CDRT1-207ENST00000583965 ZSCAN25Q6NSZ9 544 aa14.12□□□□□ -0.15
CDRT1-207ENST00000583965 TBC1D9Q6ZT07 1266 aa14.12□□□□□ -0.15
CDRT1-207ENST00000583965 GPC2Q8N158 579 aa14.12□□□□□ -0.15
CDRT1-207ENST00000583965 EDC3Q96F86 508 aaKnown RBP14.12□□□□□ -0.15
CDRT1-207ENST00000583965 FSD1Q9BTV5 496 aa14.12□□□□□ -0.15
CDRT1-207ENST00000583965 PIH1D3Q9NQM4 214 aaKnown RBP14.12□□□□□ -0.15
CDRT1-207ENST00000583965 ZNF541Q9H0D2 1346 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms