RNA–Protein interactions for RNA: ENST00000583649.1

CASC3-208, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 3

Gene CASC3, Length 577 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-208ENST00000583649 PTPN18Q99952 460 aa14.36□□□□□ -0.11
CASC3-208ENST00000583649 ZCCHC17Q9NP64 241 aaKnown RBP14.36□□□□□ -0.11
CASC3-208ENST00000583649 WTIPA6NIX2 430 aaPredicted RBP14.35□□□□□ -0.11
CASC3-208ENST00000583649 CHL1O00533 1208 aa14.35□□□□□ -0.11
CASC3-208ENST00000583649 USP2O75604 605 aaPredicted RBP14.35□□□□□ -0.11
CASC3-208ENST00000583649 RBM5P52756 815 aaKnown RBP eCLIP14.35□□□□□ -0.11
CASC3-208ENST00000583649 CTSWP56202 376 aa14.35□□□□□ -0.11
CASC3-208ENST00000583649 UBXN2AP68543 259 aa14.35□□□□□ -0.11
CASC3-208ENST00000583649 LACTBP83111 547 aaPredicted RBP14.35□□□□□ -0.11
CASC3-208ENST00000583649 MPHOSPH8Q99549 860 aa14.35□□□□□ -0.11
CASC3-208ENST00000583649 ELP3Q9H9T3 547 aa14.35□□□□□ -0.11
CASC3-208ENST00000583649 TRIOBPQ9H2D6 2365 aa14.34□□□□□ -0.11
CASC3-208ENST00000583649 BRCA2P51587 3418 aa14.34□□□□□ -0.11
CASC3-208ENST00000583649 TLR2O60603 784 aa14.34□□□□□ -0.11
CASC3-208ENST00000583649 TMPOP42166 694 aaKnown RBP14.34□□□□□ -0.11
CASC3-208ENST00000583649 NBPF12Q5TAG4 269 aaPredicted RBP14.34□□□□□ -0.11
CASC3-208ENST00000583649 GPR153Q6NV75 609 aa14.34□□□□□ -0.11
CASC3-208ENST00000583649 RAET1EQ8TD07 263 aa14.34□□□□□ -0.11
CASC3-208ENST00000583649 TRIM47Q96LD4 638 aa14.34□□□□□ -0.11
CASC3-208ENST00000583649 BIN2Q9UBW5 565 aaPredicted RBP14.34□□□□□ -0.11
CASC3-208ENST00000583649 CLRN2A0PK11 232 aa14.33□□□□□ -0.12
CASC3-208ENST00000583649 SPDYE2BA6NHP3 402 aa14.33□□□□□ -0.12
CASC3-208ENST00000583649 EVI5O60447 810 aa14.33□□□□□ -0.12
CASC3-208ENST00000583649 GJB1P08034 283 aa14.33□□□□□ -0.12
CASC3-208ENST00000583649 SPDYE6P0CI01 402 aa14.33□□□□□ -0.12
CASC3-208ENST00000583649 CETPP11597 493 aa14.33□□□□□ -0.12
CASC3-208ENST00000583649 GJA5P36382 358 aa14.33□□□□□ -0.12
CASC3-208ENST00000583649 GJA8P48165 433 aa14.33□□□□□ -0.12
CASC3-208ENST00000583649 TNNI2P48788 182 aa14.33□□□□□ -0.12
CASC3-208ENST00000583649 RASA3Q14644 834 aa14.33□□□□□ -0.12
CASC3-208ENST00000583649 CFAP100Q494V2 611 aa14.33□□□□□ -0.12
CASC3-208ENST00000583649 MS4A4AQ96JQ5 239 aa14.33□□□□□ -0.12
CASC3-208ENST00000583649 FKBP1AP62942 108 aaKnown RBP14.32□□□□□ -0.12
CASC3-208ENST00000583649 MAP3K9P80192 1104 aa14.32□□□□□ -0.12
CASC3-208ENST00000583649 NEXNQ0ZGT2 675 aa14.32□□□□□ -0.12
CASC3-208ENST00000583649 KRT24Q2M2I5 525 aa14.32□□□□□ -0.12
CASC3-208ENST00000583649 BRI3BPQ8WY22 251 aa14.32□□□□□ -0.12
CASC3-208ENST00000583649 HOOK2Q96ED9 719 aa14.32□□□□□ -0.12
CASC3-208ENST00000583649 COL4A1P02462 1669 aa14.32□□□□□ -0.12
CASC3-208ENST00000583649 LAMB1P07942 1786 aa14.32□□□□□ -0.12
CASC3-208ENST00000583649 F8W031 263 aaPredicted RBP14.31□□□□□ -0.12
CASC3-208ENST00000583649 ZBTB7BO15156 539 aaPredicted RBP14.31□□□□□ -0.12
CASC3-208ENST00000583649 GRK4P32298 578 aa14.31□□□□□ -0.12
CASC3-208ENST00000583649 NEUROD2Q15784 382 aa14.31□□□□□ -0.12
CASC3-208ENST00000583649 DUSP27Q5VZP5 1158 aa14.31□□□□□ -0.12
CASC3-208ENST00000583649 ZNF804AQ7Z570 1209 aa14.31□□□□□ -0.12
CASC3-208ENST00000583649 TTLL11Q8NHH1 800 aa14.31□□□□□ -0.12
CASC3-208ENST00000583649 METTL22Q9BUU2 404 aaPredicted RBP14.31□□□□□ -0.12
CASC3-208ENST00000583649 RNF208Q9H0X6 261 aa14.31□□□□□ -0.12
CASC3-208ENST00000583649 PRO3102Q9H379 93 aa14.31□□□□□ -0.12
CASC3-208ENST00000583649 CD209Q9NNX6 404 aa14.31□□□□□ -0.12
CASC3-208ENST00000583649 SZT2Q5T011 3432 aa14.31□□□□□ -0.12
CASC3-208ENST00000583649 FARP2O94887 1054 aaPredicted RBP14.3□□□□□ -0.12
CASC3-208ENST00000583649 FMNL1O95466 1100 aaPredicted RBP14.3□□□□□ -0.12
CASC3-208ENST00000583649 SNAPC2Q13487 334 aa14.3□□□□□ -0.12
CASC3-208ENST00000583649 PRMT6Q96LA8 375 aaPredicted RBP14.3□□□□□ -0.12
CASC3-208ENST00000583649 GREM2Q9H772 168 aa14.3□□□□□ -0.12
CASC3-208ENST00000583649 SSC5DA1L4H1 1573 aa14.3□□□□□ -0.12
CASC3-208ENST00000583649 CCL5P13501 91 aa14.29□□□□□ -0.12
CASC3-208ENST00000583649 CAP1Q01518 475 aa14.29□□□□□ -0.12
CASC3-208ENST00000583649 TXNRD3Q86VQ6 643 aa14.29□□□□□ -0.12
CASC3-208ENST00000583649 FAM43AQ8N2R8 423 aa14.29□□□□□ -0.12
CASC3-208ENST00000583649 SRRDQ9UH36 339 aa14.29□□□□□ -0.12
CASC3-208ENST00000583649 RIPOR2Q9Y4F9 1068 aa14.29□□□□□ -0.12
CASC3-208ENST00000583649 PSMC4P43686 418 aa14.28□□□□□ -0.12
CASC3-208ENST00000583649 VGLL4Q14135 290 aa14.28□□□□□ -0.12
CASC3-208ENST00000583649 MTFR1Q15390 333 aa14.28□□□□□ -0.12
CASC3-208ENST00000583649 ERO1BQ86YB8 467 aa14.28□□□□□ -0.12
CASC3-208ENST00000583649 JARID2Q92833 1246 aaPredicted RBP14.28□□□□□ -0.12
CASC3-208ENST00000583649 SHISA4Q96DD7 197 aa14.28□□□□□ -0.12
CASC3-208ENST00000583649 STXBP5LQ9Y2K9 1186 aa14.28□□□□□ -0.12
CASC3-208ENST00000583649 MYPNQ86TC9 1320 aa14.27□□□□□ -0.12
CASC3-208ENST00000583649 CALD1Q05682 793 aaKnown RBP14.27□□□□□ -0.13
CASC3-208ENST00000583649 PPP1R3FQ6ZSY5 799 aaPredicted RBP14.27□□□□□ -0.13
CASC3-208ENST00000583649 DEFB123Q8N688 67 aa14.27□□□□□ -0.13
CASC3-208ENST00000583649 SLAIN1Q8ND83 568 aa14.27□□□□□ -0.13
CASC3-208ENST00000583649 CEP290O15078 2479 aa14.27□□□□□ -0.13
CASC3-208ENST00000583649 ZNF646O15015 1829 aaPredicted RBP14.27□□□□□ -0.13
CASC3-208ENST00000583649 SPDYE5A6NIY4 337 aa14.26□□□□□ -0.13
CASC3-208ENST00000583649 ITGA6P23229 1130 aa14.26□□□□□ -0.13
CASC3-208ENST00000583649 CCDC30Q5VVM6 783 aa14.26□□□□□ -0.13
CASC3-208ENST00000583649 UBE2Q1Q7Z7E8 422 aa14.26□□□□□ -0.13
CASC3-208ENST00000583649 U2AF1L4Q8WU68 220 aaKnown RBP14.26□□□□□ -0.13
CASC3-208ENST00000583649 LRCH3Q96II8 777 aa14.26□□□□□ -0.13
CASC3-208ENST00000583649 ARHGAP39Q9C0H5 1083 aa14.26□□□□□ -0.13
CASC3-208ENST00000583649 PHAXQ9H814 394 aaKnown RBP14.26□□□□□ -0.13
CASC3-208ENST00000583649 SERPINA10Q9UK55 444 aa14.26□□□□□ -0.13
CASC3-208ENST00000583649 BTBD19C9JJ37 291 aa14.25□□□□□ -0.13
CASC3-208ENST00000583649 TFRCP02786 760 aaKnown RBP14.25□□□□□ -0.13
CASC3-208ENST00000583649 FCGRTP55899 365 aa14.25□□□□□ -0.13
CASC3-208ENST00000583649 SPDYE2Q495Y8 402 aa14.25□□□□□ -0.13
CASC3-208ENST00000583649 C15orf52Q6ZUT6 534 aaKnown RBP14.25□□□□□ -0.13
CASC3-208ENST00000583649 CERS5Q8N5B7 392 aa14.25□□□□□ -0.13
CASC3-208ENST00000583649 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.25□□□□□ -0.13
CASC3-208ENST00000583649 ZNF70Q9UC06 446 aaPredicted RBP14.25□□□□□ -0.13
CASC3-208ENST00000583649 STAP2Q9UGK3 403 aa14.25□□□□□ -0.13
CASC3-208ENST00000583649 MAP3K2Q9Y2U5 619 aa14.25□□□□□ -0.13
CASC3-208ENST00000583649 SGPL1O95470 568 aa14.24□□□□□ -0.13
CASC3-208ENST00000583649 IL1R1P14778 569 aa14.24□□□□□ -0.13
CASC3-208ENST00000583649 OSBPP22059 807 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms