RNA–Protein interactions for RNA: ENST00000583438.1

PPP4R1-225, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 4

Gene PPP4R1, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-225ENST00000583438 FCF1Q9Y324 198 aaKnown RBP10.6□□□□□ -0.71
PPP4R1-225ENST00000583438 CNTNAP1P78357 1384 aa10.6□□□□□ -0.71
PPP4R1-225ENST00000583438 DDX60Q8IY21 1712 aaKnown RBP10.59□□□□□ -0.71
PPP4R1-225ENST00000583438 KLRG2A4D1S0 409 aaPredicted RBP10.59□□□□□ -0.71
PPP4R1-225ENST00000583438 PDE6BP35913 854 aa10.59□□□□□ -0.71
PPP4R1-225ENST00000583438 ABL2P42684 1182 aa10.59□□□□□ -0.71
PPP4R1-225ENST00000583438 TEFQ10587 303 aa10.59□□□□□ -0.71
PPP4R1-225ENST00000583438 FMNL2Q96PY5 1086 aa10.59□□□□□ -0.71
PPP4R1-225ENST00000583438 PRM3Q9NNZ6 103 aa10.59□□□□□ -0.71
PPP4R1-225ENST00000583438 ZNF277Q9NRM2 450 aaPredicted RBP10.59□□□□□ -0.71
PPP4R1-225ENST00000583438 DUOX1Q9NRD9 1551 aa10.58□□□□□ -0.72
PPP4R1-225ENST00000583438 A0A087WZG4 1122 aa10.58□□□□□ -0.72
PPP4R1-225ENST00000583438 BTBD11A6QL63 1104 aa10.58□□□□□ -0.72
PPP4R1-225ENST00000583438 RNF223E7ERA6 249 aa10.58□□□□□ -0.72
PPP4R1-225ENST00000583438 IRF5Q13568 498 aa10.58□□□□□ -0.72
PPP4R1-225ENST00000583438 PPP1R18Q6NYC8 613 aa10.58□□□□□ -0.72
PPP4R1-225ENST00000583438 GAS2L2Q8NHY3 880 aa10.58□□□□□ -0.72
PPP4R1-225ENST00000583438 CCER1Q8TC90 406 aaPredicted RBP10.58□□□□□ -0.72
PPP4R1-225ENST00000583438 TAF1DQ9H5J8 278 aaPredicted RBP10.58□□□□□ -0.72
PPP4R1-225ENST00000583438 MIS18AQ9NYP9 233 aa10.58□□□□□ -0.72
PPP4R1-225ENST00000583438 UBN2Q6ZU65 1347 aa10.58□□□□□ -0.72
PPP4R1-225ENST00000583438 MASTLQ96GX5 879 aa10.57□□□□□ -0.72
PPP4R1-225ENST00000583438 SETDB2Q96T68 719 aa10.57□□□□□ -0.72
PPP4R1-225ENST00000583438 LRRC37AA6NMS7 1700 aa10.57□□□□□ -0.72
PPP4R1-225ENST00000583438 POLR2AP24928 1970 aaKnown RBP10.57□□□□□ -0.72
PPP4R1-225ENST00000583438 RNF123Q5XPI4 1314 aa10.57□□□□□ -0.72
PPP4R1-225ENST00000583438 FAM177BA6PVY3 158 aa10.56□□□□□ -0.72
PPP4R1-225ENST00000583438 TRAK2O60296 914 aa10.56□□□□□ -0.72
PPP4R1-225ENST00000583438 PPP2R1AP30153 589 aa10.56□□□□□ -0.72
PPP4R1-225ENST00000583438 VEGFBP49765 207 aa10.56□□□□□ -0.72
PPP4R1-225ENST00000583438 THUMPD2Q9BTF0 503 aaKnown RBP10.56□□□□□ -0.72
PPP4R1-225ENST00000583438 RIC1Q4ADV7 1423 aa10.56□□□□□ -0.72
PPP4R1-225ENST00000583438 PLA2G2CQ5R387 149 aa10.55□□□□□ -0.72
PPP4R1-225ENST00000583438 TTLL7Q6ZT98 887 aa10.55□□□□□ -0.72
PPP4R1-225ENST00000583438 CNKSR1Q969H4 720 aa10.55□□□□□ -0.72
PPP4R1-225ENST00000583438 UNC93B1Q9H1C4 597 aa10.55□□□□□ -0.72
PPP4R1-225ENST00000583438 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.55□□□□□ -0.72
PPP4R1-225ENST00000583438 FKBPLQ9UIM3 349 aa10.55□□□□□ -0.72
PPP4R1-225ENST00000583438 ZNF646O15015 1829 aaPredicted RBP10.54□□□□□ -0.72
PPP4R1-225ENST00000583438 SCN9AQ15858 1988 aa10.54□□□□□ -0.72
PPP4R1-225ENST00000583438 CASP8AP2Q9UKL3 1982 aa10.54□□□□□ -0.72
PPP4R1-225ENST00000583438 FZD9O00144 591 aa10.54□□□□□ -0.72
PPP4R1-225ENST00000583438 NPR1P16066 1061 aa10.54□□□□□ -0.72
PPP4R1-225ENST00000583438 ST5P78524 1137 aa10.54□□□□□ -0.72
PPP4R1-225ENST00000583438 FKBP4Q02790 459 aaKnown RBP eCLIP10.54□□□□□ -0.72
PPP4R1-225ENST00000583438 CRY2Q49AN0 593 aa10.54□□□□□ -0.72
PPP4R1-225ENST00000583438 CCDC93Q567U6 631 aa10.54□□□□□ -0.72
PPP4R1-225ENST00000583438 MAP1SQ66K74 1059 aaPredicted RBP10.54□□□□□ -0.72
PPP4R1-225ENST00000583438 LRP10Q7Z4F1 713 aa10.54□□□□□ -0.72
PPP4R1-225ENST00000583438 NBPF5PQ86XG9 351 aaPredicted RBP10.54□□□□□ -0.72
PPP4R1-225ENST00000583438 TEX13AQ9BXU3 409 aaPredicted RBP10.54□□□□□ -0.72
PPP4R1-225ENST00000583438 NIP7Q9Y221 180 aaKnown RBP eCLIP10.54□□□□□ -0.72
PPP4R1-225ENST00000583438 TNRC18O15417 2968 aaPredicted RBP10.53□□□□□ -0.72
PPP4R1-225ENST00000583438 SNRPA1P09661 255 aaKnown RBP10.53□□□□□ -0.72
PPP4R1-225ENST00000583438 GGCXP38435 758 aa10.53□□□□□ -0.72
PPP4R1-225ENST00000583438 CLEC4GQ6UXB4 293 aa10.53□□□□□ -0.72
PPP4R1-225ENST00000583438 LDHDQ86WU2 507 aa10.53□□□□□ -0.72
PPP4R1-225ENST00000583438 ANKLE1Q8NAG6 615 aa10.53□□□□□ -0.72
PPP4R1-225ENST00000583438 PLA2G2EQ9NZK7 142 aa10.53□□□□□ -0.72
PPP4R1-225ENST00000583438 EPHX2P34913 555 aa10.52□□□□□ -0.73
PPP4R1-225ENST00000583438 IARSP41252 1262 aaKnown RBP10.52□□□□□ -0.73
PPP4R1-225ENST00000583438 EAPPQ56P03 285 aaPredicted RBP10.52□□□□□ -0.73
PPP4R1-225ENST00000583438 SYNE4Q8N205 404 aa10.52□□□□□ -0.73
PPP4R1-225ENST00000583438 PLEKHF1Q96S99 279 aa10.52□□□□□ -0.73
PPP4R1-225ENST00000583438 PDZRN3Q9UPQ7 1066 aa10.52□□□□□ -0.73
PPP4R1-225ENST00000583438 U2AF1L5P0DN76 240 aaPredicted RBP10.51□□□□□ -0.73
PPP4R1-225ENST00000583438 SCNN1DP51172 638 aa10.51□□□□□ -0.73
PPP4R1-225ENST00000583438 U2AF1Q01081 240 aaKnown RBP eCLIP10.51□□□□□ -0.73
PPP4R1-225ENST00000583438 PROSER3Q2NL68 480 aa10.51□□□□□ -0.73
PPP4R1-225ENST00000583438 NGEFQ8N5V2 710 aa10.51□□□□□ -0.73
PPP4R1-225ENST00000583438 PSME4Q14997 1843 aa10.5□□□□□ -0.73
PPP4R1-225ENST00000583438 SHTN1A0MZ66 631 aa10.5□□□□□ -0.73
PPP4R1-225ENST00000583438 TRAF5O00463 557 aa10.5□□□□□ -0.73
PPP4R1-225ENST00000583438 NTSR2O95665 410 aa10.5□□□□□ -0.73
PPP4R1-225ENST00000583438 HSPA8P11142 646 aaKnown RBP10.5□□□□□ -0.73
PPP4R1-225ENST00000583438 GPTP24298 496 aa10.5□□□□□ -0.73
PPP4R1-225ENST00000583438 EPS15P42566 896 aa10.5□□□□□ -0.73
PPP4R1-225ENST00000583438 LBX1P52954 281 aa10.5□□□□□ -0.73
PPP4R1-225ENST00000583438 SUSD4Q5VX71 490 aa10.5□□□□□ -0.73
PPP4R1-225ENST00000583438 PNMA1Q8ND90 353 aa10.5□□□□□ -0.73
PPP4R1-225ENST00000583438 HACL1Q9UJ83 578 aa10.5□□□□□ -0.73
PPP4R1-225ENST00000583438 MAP3K15Q6ZN16 1313 aa10.5□□□□□ -0.73
PPP4R1-225ENST00000583438 RASSF10A6NK89 507 aa10.49□□□□□ -0.73
PPP4R1-225ENST00000583438 TMEM88BA6NKF7 163 aa10.49□□□□□ -0.73
PPP4R1-225ENST00000583438 POM121CA8CG34 1229 aa10.49□□□□□ -0.73
PPP4R1-225ENST00000583438 ANXA1P04083 346 aa10.49□□□□□ -0.73
PPP4R1-225ENST00000583438 EIF4A1P60842 406 aaKnown RBP10.49□□□□□ -0.73
PPP4R1-225ENST00000583438 VAC14Q08AM6 782 aa10.49□□□□□ -0.73
PPP4R1-225ENST00000583438 CST9Q5W186 159 aa10.49□□□□□ -0.73
PPP4R1-225ENST00000583438 DLK2Q6UY11 383 aa10.49□□□□□ -0.73
PPP4R1-225ENST00000583438 ARMC2Q8NEN0 867 aa10.49□□□□□ -0.73
PPP4R1-225ENST00000583438 BAP1Q92560 729 aa10.49□□□□□ -0.73
PPP4R1-225ENST00000583438 SPEF2Q9C093 1822 aa10.49□□□□□ -0.73
PPP4R1-225ENST00000583438 IQCA1LA6NCM1 817 aa10.48□□□□□ -0.73
PPP4R1-225ENST00000583438 TCERG1O14776 1098 aaKnown RBP10.48□□□□□ -0.73
PPP4R1-225ENST00000583438 NPHP1O15259 732 aa10.48□□□□□ -0.73
PPP4R1-225ENST00000583438 HOXA10P31260 410 aaPredicted RBP10.48□□□□□ -0.73
PPP4R1-225ENST00000583438 TAF7Q15545 349 aaPredicted RBP10.48□□□□□ -0.73
PPP4R1-225ENST00000583438 SOGA3Q5TF21 947 aa10.48□□□□□ -0.73
PPP4R1-225ENST00000583438 WWC1Q8IX03 1113 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms