RNA–Protein interactions for RNA: ENST00000583363.5

CDK5RAP3-228, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 558 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-228ENST00000583363 WASHC4Q2M389 1173 aa19.93■□□□□ 0.78
CDK5RAP3-228ENST00000583363 VPS37DQ86XT2 251 aa19.93■□□□□ 0.78
CDK5RAP3-228ENST00000583363 HAUS7Q99871 368 aa19.93■□□□□ 0.78
CDK5RAP3-228ENST00000583363 FKBP4Q02790 459 aaKnown RBP eCLIP19.92■□□□□ 0.78
CDK5RAP3-228ENST00000583363 SCARF1Q14162 830 aa19.92■□□□□ 0.78
CDK5RAP3-228ENST00000583363 BMP2KLQ5H9B9 411 aa19.92■□□□□ 0.78
CDK5RAP3-228ENST00000583363 DPY19L2Q6NUT2 758 aa19.92■□□□□ 0.78
CDK5RAP3-228ENST00000583363 ARAP2Q8WZ64 1704 aa19.92■□□□□ 0.78
CDK5RAP3-228ENST00000583363 DUOX1Q9NRD9 1551 aa19.91■□□□□ 0.78
CDK5RAP3-228ENST00000583363 MCAMP43121 646 aa19.91■□□□□ 0.78
CDK5RAP3-228ENST00000583363 ZNF804AQ7Z570 1209 aa19.91■□□□□ 0.78
CDK5RAP3-228ENST00000583363 TDRD7Q8NHU6 1098 aaKnown RBP19.91■□□□□ 0.78
CDK5RAP3-228ENST00000583363 VPS33BQ9H267 617 aa19.91■□□□□ 0.78
CDK5RAP3-228ENST00000583363 CD209Q9NNX6 404 aa19.91■□□□□ 0.78
CDK5RAP3-228ENST00000583363 SEMA3EO15041 775 aa19.9■□□□□ 0.78
CDK5RAP3-228ENST00000583363 IL1R1P14778 569 aa19.9■□□□□ 0.78
CDK5RAP3-228ENST00000583363 COA1Q9GZY4 146 aa19.9■□□□□ 0.78
CDK5RAP3-228ENST00000583363 HMG20BQ9P0W2 317 aa19.9■□□□□ 0.78
CDK5RAP3-228ENST00000583363 MAP4K4O95819 1239 aaPredicted RBP19.89■□□□□ 0.77
CDK5RAP3-228ENST00000583363 HSPA1AP0DMV8 641 aaKnown RBP19.89■□□□□ 0.77
CDK5RAP3-228ENST00000583363 HSPA1BP0DMV9 641 aaKnown RBP19.89■□□□□ 0.77
CDK5RAP3-228ENST00000583363 SDSP20132 328 aa19.89■□□□□ 0.77
CDK5RAP3-228ENST00000583363 KIAA2012Q0VF49 1180 aa19.89■□□□□ 0.77
CDK5RAP3-228ENST00000583363 RASGRF1Q13972 1273 aa19.89■□□□□ 0.77
CDK5RAP3-228ENST00000583363 TNS4Q8IZW8 715 aa19.89■□□□□ 0.77
CDK5RAP3-228ENST00000583363 SPATA5Q8NB90 893 aa19.89■□□□□ 0.77
CDK5RAP3-228ENST00000583363 TAOK3Q9H2K8 898 aa19.89■□□□□ 0.77
CDK5RAP3-228ENST00000583363 SNRKQ9NRH2 765 aa19.89■□□□□ 0.77
CDK5RAP3-228ENST00000583363 LTBP3Q9NS15 1303 aa19.89■□□□□ 0.77
CDK5RAP3-228ENST00000583363 DENND2AQ9ULE3 1009 aa19.89■□□□□ 0.77
CDK5RAP3-228ENST00000583363 NDUFB9Q9Y6M9 179 aa19.89■□□□□ 0.77
CDK5RAP3-228ENST00000583363 TRIM6-TRIM34B2RNG4 842 aa19.88■□□□□ 0.77
CDK5RAP3-228ENST00000583363 CAPN15O75808 1086 aa19.88■□□□□ 0.77
CDK5RAP3-228ENST00000583363 ZAP70P43403 619 aa19.88■□□□□ 0.77
CDK5RAP3-228ENST00000583363 EVI5LQ96CN4 794 aa19.88■□□□□ 0.77
CDK5RAP3-228ENST00000583363 DNAJC2Q99543 621 aaKnown RBP19.88■□□□□ 0.77
CDK5RAP3-228ENST00000583363 IQSEC3Q9UPP2 1182 aaPredicted RBP19.88■□□□□ 0.77
CDK5RAP3-228ENST00000583363 DDNO94850 711 aaPredicted RBP19.87■□□□□ 0.77
CDK5RAP3-228ENST00000583363 AOC3Q16853 763 aa19.87■□□□□ 0.77
CDK5RAP3-228ENST00000583363 DOK7Q18PE1 504 aa19.87■□□□□ 0.77
CDK5RAP3-228ENST00000583363 PI16Q6UXB8 463 aa19.87■□□□□ 0.77
CDK5RAP3-228ENST00000583363 CNTROBQ8N137 903 aa19.87■□□□□ 0.77
CDK5RAP3-228ENST00000583363 RILPL2Q969X0 211 aa19.87■□□□□ 0.77
CDK5RAP3-228ENST00000583363 ZNF277Q9NRM2 450 aaPredicted RBP19.87■□□□□ 0.77
CDK5RAP3-228ENST00000583363 PPIP5K2O43314 1243 aa19.86■□□□□ 0.77
CDK5RAP3-228ENST00000583363 FRAT2O75474 233 aaPredicted RBP19.86■□□□□ 0.77
CDK5RAP3-228ENST00000583363 CYP2E1P05181 493 aaPredicted RBP19.86■□□□□ 0.77
CDK5RAP3-228ENST00000583363 POTEIP0CG38 1075 aa19.86■□□□□ 0.77
CDK5RAP3-228ENST00000583363 POTEJP0CG39 1038 aa19.86■□□□□ 0.77
CDK5RAP3-228ENST00000583363 PODNQ7Z5L7 613 aa19.86■□□□□ 0.77
CDK5RAP3-228ENST00000583363 EDC3Q96F86 508 aaKnown RBP19.86■□□□□ 0.77
CDK5RAP3-228ENST00000583363 ANTXR1Q9H6X2 564 aa19.86■□□□□ 0.77
CDK5RAP3-228ENST00000583363 PAG1Q9NWQ8 432 aa19.86■□□□□ 0.77
CDK5RAP3-228ENST00000583363 AKAP11Q9UKA4 1901 aa19.86■□□□□ 0.77
CDK5RAP3-228ENST00000583363 PDS5AQ29RF7 1337 aaKnown RBP19.85■□□□□ 0.77
CDK5RAP3-228ENST00000583363 G3V3G9 751 aa19.85■□□□□ 0.77
CDK5RAP3-228ENST00000583363 GOLIM4O00461 696 aa19.85■□□□□ 0.77
CDK5RAP3-228ENST00000583363 DCAF8Q5TAQ9 597 aa19.85■□□□□ 0.77
CDK5RAP3-228ENST00000583363 IARSP41252 1262 aaKnown RBP19.84■□□□□ 0.77
CDK5RAP3-228ENST00000583363 CHADLQ6NUI6 762 aa19.84■□□□□ 0.77
CDK5RAP3-228ENST00000583363 ECE2O60344 883 aa19.83■□□□□ 0.77
CDK5RAP3-228ENST00000583363 TTF1Q15361 905 aaPredicted RBP19.83■□□□□ 0.77
CDK5RAP3-228ENST00000583363 TBC1D9Q6ZT07 1266 aa19.83■□□□□ 0.77
CDK5RAP3-228ENST00000583363 LARGE2Q8N3Y3 721 aa19.83■□□□□ 0.77
CDK5RAP3-228ENST00000583363 KBTBD3Q8NAB2 608 aa19.83■□□□□ 0.77
CDK5RAP3-228ENST00000583363 DBNDD1Q9H9R9 158 aa19.83■□□□□ 0.77
CDK5RAP3-228ENST00000583363 FAM205AQ6ZU69 1335 aa19.82■□□□□ 0.76
CDK5RAP3-228ENST00000583363 CHAF1AQ13111 956 aaPredicted RBP19.82■□□□□ 0.76
CDK5RAP3-228ENST00000583363 TICAM2Q86XR7 235 aa19.82■□□□□ 0.76
CDK5RAP3-228ENST00000583363 WDR66Q8TBY9 1149 aa19.82■□□□□ 0.76
CDK5RAP3-228ENST00000583363 PIH1D3Q9NQM4 214 aaKnown RBP19.82■□□□□ 0.76
CDK5RAP3-228ENST00000583363 CREBZFQ9NS37 354 aa19.82■□□□□ 0.76
CDK5RAP3-228ENST00000583363 COL1A1P02452 1464 aaPredicted RBP19.81■□□□□ 0.76
CDK5RAP3-228ENST00000583363 KCNQ5Q9NR82 932 aa19.81■□□□□ 0.76
CDK5RAP3-228ENST00000583363 MKRN1Q9UHC7 482 aaKnown RBP19.81■□□□□ 0.76
CDK5RAP3-228ENST00000583363 SCN4AP35499 1836 aa19.81■□□□□ 0.76
CDK5RAP3-228ENST00000583363 SALL1Q9NSC2 1324 aa19.8■□□□□ 0.76
CDK5RAP3-228ENST00000583363 YDJCA8MPS7 323 aa19.8■□□□□ 0.76
CDK5RAP3-228ENST00000583363 GTF2IP78347 998 aa19.8■□□□□ 0.76
CDK5RAP3-228ENST00000583363 TTLL5Q6EMB2 1281 aa19.8■□□□□ 0.76
CDK5RAP3-228ENST00000583363 FSD1Q9BTV5 496 aa19.8■□□□□ 0.76
CDK5RAP3-228ENST00000583363 JAG2Q9Y219 1238 aa19.8■□□□□ 0.76
CDK5RAP3-228ENST00000583363 CDC45O75419 566 aa19.79■□□□□ 0.76
CDK5RAP3-228ENST00000583363 NIM1KQ8IY84 436 aa19.79■□□□□ 0.76
CDK5RAP3-228ENST00000583363 ZNRF3Q9ULT6 936 aa19.79■□□□□ 0.76
CDK5RAP3-228ENST00000583363 CHMLP26374 656 aa19.78■□□□□ 0.76
CDK5RAP3-228ENST00000583363 STRIP1Q5VSL9 837 aa19.78■□□□□ 0.76
CDK5RAP3-228ENST00000583363 ZGPATQ8N5A5 531 aaKnown RBP19.78■□□□□ 0.76
CDK5RAP3-228ENST00000583363 TBC1D22AQ8WUA7 517 aa19.78■□□□□ 0.76
CDK5RAP3-228ENST00000583363 L3MBTL3Q96JM7 780 aaPredicted RBP19.78■□□□□ 0.76
CDK5RAP3-228ENST00000583363 ABCF2Q9UG63 623 aa19.78■□□□□ 0.76
CDK5RAP3-228ENST00000583363 IQCA1LA6NCM1 817 aa19.77■□□□□ 0.76
CDK5RAP3-228ENST00000583363 USP17L3A6NCW0 530 aa19.77■□□□□ 0.76
CDK5RAP3-228ENST00000583363 USP17L4A6NCW7 530 aa19.77■□□□□ 0.76
CDK5RAP3-228ENST00000583363 HIP1O00291 1037 aa19.77■□□□□ 0.76
CDK5RAP3-228ENST00000583363 IGSF3O75054 1194 aa19.77■□□□□ 0.76
CDK5RAP3-228ENST00000583363 FKBP1AP62942 108 aaKnown RBP19.77■□□□□ 0.76
CDK5RAP3-228ENST00000583363 SPTY2D1Q68D10 685 aaPredicted RBP19.77■□□□□ 0.76
CDK5RAP3-228ENST00000583363 ERICH6Q7L0X2 663 aa19.77■□□□□ 0.76
CDK5RAP3-228ENST00000583363 USP17L1Q7RTZ2 530 aa19.77■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms