RNA–Protein interactions for RNA: ENST00000581335.1

NUP85-217, Transcript of nucleoporin 85, humanhuman

TSL 3

Gene NUP85, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP85-217ENST00000581335 GBA2Q9HCG7 927 aaPredicted RBP11.23□□□□□ -0.61
NUP85-217ENST00000581335 BSDC1Q9NW68 430 aaPredicted RBP11.23□□□□□ -0.61
NUP85-217ENST00000581335 TSKSQ9UJT2 592 aa11.23□□□□□ -0.61
NUP85-217ENST00000581335 IL16Q14005 1332 aa11.23□□□□□ -0.61
NUP85-217ENST00000581335 ZNF609O15014 1411 aa11.23□□□□□ -0.61
NUP85-217ENST00000581335 CACNA1FO60840 1977 aa11.23□□□□□ -0.61
NUP85-217ENST00000581335 NEURL1BA8MQ27 555 aa11.22□□□□□ -0.61
NUP85-217ENST00000581335 H7C1W4 665 aa11.22□□□□□ -0.61
NUP85-217ENST00000581335 IRX5P78411 483 aaPredicted RBP11.22□□□□□ -0.61
NUP85-217ENST00000581335 RGMBQ6NW40 437 aa11.22□□□□□ -0.61
NUP85-217ENST00000581335 SULF1Q8IWU6 871 aa11.22□□□□□ -0.61
NUP85-217ENST00000581335 GREM2Q9H772 168 aa11.22□□□□□ -0.61
NUP85-217ENST00000581335 MINPP1Q9UNW1 487 aa11.22□□□□□ -0.61
NUP85-217ENST00000581335 USP17L3A6NCW0 530 aa11.21□□□□□ -0.61
NUP85-217ENST00000581335 USP17L4A6NCW7 530 aa11.21□□□□□ -0.61
NUP85-217ENST00000581335 WTIPA6NIX2 430 aaPredicted RBP11.21□□□□□ -0.61
NUP85-217ENST00000581335 FAM155AB1AL88 458 aaPredicted RBP11.21□□□□□ -0.61
NUP85-217ENST00000581335 USP17L8P0C7I0 530 aa11.21□□□□□ -0.61
NUP85-217ENST00000581335 PDE4DQ08499 809 aa11.21□□□□□ -0.61
NUP85-217ENST00000581335 SCARF1Q14162 830 aa11.21□□□□□ -0.61
NUP85-217ENST00000581335 USP17L1Q7RTZ2 530 aa11.21□□□□□ -0.61
NUP85-217ENST00000581335 PLPP6Q8IY26 295 aa11.21□□□□□ -0.61
NUP85-217ENST00000581335 KRI1Q8N9T8 703 aaKnown RBP11.21□□□□□ -0.61
NUP85-217ENST00000581335 TMC2Q8TDI7 906 aa11.21□□□□□ -0.61
NUP85-217ENST00000581335 CCDC102AQ96A19 550 aa11.21□□□□□ -0.61
NUP85-217ENST00000581335 ZIC5Q96T25 663 aa11.21□□□□□ -0.61
NUP85-217ENST00000581335 GMLQ99445 158 aa11.21□□□□□ -0.61
NUP85-217ENST00000581335 KDM4CQ9H3R0 1056 aa11.21□□□□□ -0.61
NUP85-217ENST00000581335 GGA3Q9NZ52 723 aa11.21□□□□□ -0.61
NUP85-217ENST00000581335 MED23Q9ULK4 1368 aa11.2□□□□□ -0.62
NUP85-217ENST00000581335 ASTN2O75129 1339 aaPredicted RBP11.2□□□□□ -0.62
NUP85-217ENST00000581335 CASP8AP2Q9UKL3 1982 aa11.2□□□□□ -0.62
NUP85-217ENST00000581335 IGHMBP2P38935 993 aaKnown RBP11.2□□□□□ -0.62
NUP85-217ENST00000581335 CCT4P50991 539 aaKnown RBP11.2□□□□□ -0.62
NUP85-217ENST00000581335 GCKRQ14397 625 aa11.2□□□□□ -0.62
NUP85-217ENST00000581335 ANGEL2Q5VTE6 544 aaKnown RBP11.2□□□□□ -0.62
NUP85-217ENST00000581335 UBE3BQ7Z3V4 1068 aa11.2□□□□□ -0.62
NUP85-217ENST00000581335 MYOZ2Q9NPC6 264 aa11.2□□□□□ -0.62
NUP85-217ENST00000581335 ZNF646O15015 1829 aaPredicted RBP11.2□□□□□ -0.62
NUP85-217ENST00000581335 PITPNM2Q9BZ72 1349 aa11.19□□□□□ -0.62
NUP85-217ENST00000581335 C2orf72A6NCS6 295 aa11.19□□□□□ -0.62
NUP85-217ENST00000581335 VAMP4O75379 141 aa11.19□□□□□ -0.62
NUP85-217ENST00000581335 ZNF157P51786 506 aaPredicted RBP11.19□□□□□ -0.62
NUP85-217ENST00000581335 ATN1P54259 1190 aaPredicted RBP11.19□□□□□ -0.62
NUP85-217ENST00000581335 FLIIQ13045 1269 aa11.19□□□□□ -0.62
NUP85-217ENST00000581335 WDR63Q8IWG1 891 aa11.19□□□□□ -0.62
NUP85-217ENST00000581335 DNAAF4Q8WXU2 420 aa11.19□□□□□ -0.62
NUP85-217ENST00000581335 CDCA5Q96FF9 252 aa11.19□□□□□ -0.62
NUP85-217ENST00000581335 PLA2G12BQ9BX93 195 aa11.19□□□□□ -0.62
NUP85-217ENST00000581335 MYH16Q9H6N6 1097 aa11.19□□□□□ -0.62
NUP85-217ENST00000581335 MRS2Q9HD23 443 aa11.19□□□□□ -0.62
NUP85-217ENST00000581335 LEMD3Q9Y2U8 911 aa11.19□□□□□ -0.62
NUP85-217ENST00000581335 AKAP11Q9UKA4 1901 aa11.19□□□□□ -0.62
NUP85-217ENST00000581335 FANCIQ9NVI1 1328 aa11.18□□□□□ -0.62
NUP85-217ENST00000581335 CSF1RP07333 972 aa11.18□□□□□ -0.62
NUP85-217ENST00000581335 ITGA6P23229 1130 aa11.18□□□□□ -0.62
NUP85-217ENST00000581335 CASP7P55210 303 aa11.18□□□□□ -0.62
NUP85-217ENST00000581335 KIF23Q02241 960 aaPredicted RBP11.18□□□□□ -0.62
NUP85-217ENST00000581335 FKBP5Q13451 457 aaPredicted RBP11.18□□□□□ -0.62
NUP85-217ENST00000581335 DACT2Q5SW24 774 aa11.18□□□□□ -0.62
NUP85-217ENST00000581335 LINS1Q8NG48 757 aa11.18□□□□□ -0.62
NUP85-217ENST00000581335 ANKRD2Q9GZV1 360 aa11.18□□□□□ -0.62
NUP85-217ENST00000581335 COA1Q9GZY4 146 aa11.18□□□□□ -0.62
NUP85-217ENST00000581335 ZNF804BA4D1E1 1349 aa11.17□□□□□ -0.62
NUP85-217ENST00000581335 MYO3BQ8WXR4 1341 aa11.17□□□□□ -0.62
NUP85-217ENST00000581335 CCDC85CA6NKD9 419 aa11.17□□□□□ -0.62
NUP85-217ENST00000581335 ANP32CO43423 234 aa11.17□□□□□ -0.62
NUP85-217ENST00000581335 SLC10A3P09131 477 aa11.17□□□□□ -0.62
NUP85-217ENST00000581335 MMP14P50281 582 aa11.17□□□□□ -0.62
NUP85-217ENST00000581335 FKBP1BP68106 108 aa11.17□□□□□ -0.62
NUP85-217ENST00000581335 STRIP1Q5VSL9 837 aa11.17□□□□□ -0.62
NUP85-217ENST00000581335 TXNRD3Q86VQ6 643 aa11.17□□□□□ -0.62
NUP85-217ENST00000581335 OGFOD1Q8N543 542 aa11.17□□□□□ -0.62
NUP85-217ENST00000581335 MPHOSPH8Q99549 860 aa11.17□□□□□ -0.62
NUP85-217ENST00000581335 MXD3Q9BW11 206 aa11.17□□□□□ -0.62
NUP85-217ENST00000581335 SAGE1Q9NXZ1 904 aa11.17□□□□□ -0.62
NUP85-217ENST00000581335 SALL2Q9Y467 1007 aaPredicted RBP11.17□□□□□ -0.62
NUP85-217ENST00000581335 PAPPA2Q9BXP8 1791 aa11.16□□□□□ -0.62
NUP85-217ENST00000581335 EXOSC9Q06265 439 aaKnown RBP11.16□□□□□ -0.62
NUP85-217ENST00000581335 FAM161AQ3B820 660 aa11.16□□□□□ -0.62
NUP85-217ENST00000581335 NBPF9Q3BBW0 867 aa11.16□□□□□ -0.62
NUP85-217ENST00000581335 TTLL5Q6EMB2 1281 aa11.16□□□□□ -0.62
NUP85-217ENST00000581335 IL27Q8NEV9 243 aa11.16□□□□□ -0.62
NUP85-217ENST00000581335 FBXW7Q969H0 707 aa11.16□□□□□ -0.62
NUP85-217ENST00000581335 MCOLN1Q9GZU1 580 aa11.16□□□□□ -0.62
NUP85-217ENST00000581335 RNF186Q9NXI6 227 aa11.16□□□□□ -0.62
NUP85-217ENST00000581335 SCAF8Q9UPN6 1271 aaKnown RBP11.16□□□□□ -0.62
NUP85-217ENST00000581335 ANKRD18BA2A2Z9 1011 aa11.15□□□□□ -0.62
NUP85-217ENST00000581335 WNT10BO00744 389 aa11.15□□□□□ -0.62
NUP85-217ENST00000581335 ATMINO43313 823 aaPredicted RBP11.15□□□□□ -0.62
NUP85-217ENST00000581335 CHRNDQ07001 517 aa11.15□□□□□ -0.62
NUP85-217ENST00000581335 DGKZQ13574 1117 aa11.15□□□□□ -0.62
NUP85-217ENST00000581335 RASAL3Q86YV0 1011 aa11.15□□□□□ -0.62
NUP85-217ENST00000581335 CSRNP1Q96S65 589 aa11.15□□□□□ -0.62
NUP85-217ENST00000581335 OCEL1Q9H607 264 aa11.15□□□□□ -0.62
NUP85-217ENST00000581335 DAXXQ9UER7 740 aaPredicted RBP11.15□□□□□ -0.62
NUP85-217ENST00000581335 BOLA1Q9Y3E2 137 aa11.15□□□□□ -0.62
NUP85-217ENST00000581335 A0A1B0GUL6 1792 aa11.15□□□□□ -0.62
NUP85-217ENST00000581335 TRPA1O75762 1119 aa11.14□□□□□ -0.63
NUP85-217ENST00000581335 KLRK1P26718 216 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms