RNA–Protein interactions for RNA: ENST00000580654.5

SMARCE1-217, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-217ENST00000580654 GJA5P36382 358 aa10.17□□□□□ -0.78
SMARCE1-217ENST00000580654 U2AF1Q01081 240 aaKnown RBP eCLIP10.17□□□□□ -0.78
SMARCE1-217ENST00000580654 SP3Q02447 781 aa10.17□□□□□ -0.78
SMARCE1-217ENST00000580654 CNGB1Q14028 1251 aaPredicted RBP10.17□□□□□ -0.78
SMARCE1-217ENST00000580654 SLC4A8Q2Y0W8 1093 aa10.17□□□□□ -0.78
SMARCE1-217ENST00000580654 HSP90AB3PQ58FF7 597 aa10.17□□□□□ -0.78
SMARCE1-217ENST00000580654 COPS6Q7L5N1 327 aa10.17□□□□□ -0.78
SMARCE1-217ENST00000580654 SHISA4Q96DD7 197 aa10.17□□□□□ -0.78
SMARCE1-217ENST00000580654 LRCH3Q96II8 777 aa10.17□□□□□ -0.78
SMARCE1-217ENST00000580654 PTPN18Q99952 460 aa10.17□□□□□ -0.78
SMARCE1-217ENST00000580654 OTOFQ9HC10 1997 aa10.17□□□□□ -0.78
SMARCE1-217ENST00000580654 USP17L3A6NCW0 530 aa10.16□□□□□ -0.78
SMARCE1-217ENST00000580654 USP17L4A6NCW7 530 aa10.16□□□□□ -0.78
SMARCE1-217ENST00000580654 SASH1O94885 1247 aa10.16□□□□□ -0.78
SMARCE1-217ENST00000580654 ZBTB48P10074 688 aaPredicted RBP10.16□□□□□ -0.78
SMARCE1-217ENST00000580654 EIF2S2P20042 333 aaKnown RBP10.16□□□□□ -0.78
SMARCE1-217ENST00000580654 RPS8P62241 208 aaKnown RBP10.16□□□□□ -0.78
SMARCE1-217ENST00000580654 AIMP1Q12904 312 aaKnown RBP10.16□□□□□ -0.78
SMARCE1-217ENST00000580654 MAP3K11Q16584 847 aa10.16□□□□□ -0.78
SMARCE1-217ENST00000580654 SLC9C1Q4G0N8 1177 aa10.16□□□□□ -0.78
SMARCE1-217ENST00000580654 USP17L1Q7RTZ2 530 aa10.16□□□□□ -0.78
SMARCE1-217ENST00000580654 XAGE3Q8WTP9 111 aa10.16□□□□□ -0.78
SMARCE1-217ENST00000580654 FAM89AQ96GI7 184 aa10.16□□□□□ -0.78
SMARCE1-217ENST00000580654 ECM29Q5VYK3 1845 aa10.16□□□□□ -0.78
SMARCE1-217ENST00000580654 VCANP13611 3396 aa10.15□□□□□ -0.78
SMARCE1-217ENST00000580654 G3V3G9 751 aa10.15□□□□□ -0.78
SMARCE1-217ENST00000580654 DACT2Q5SW24 774 aa10.15□□□□□ -0.78
SMARCE1-217ENST00000580654 UBE2Q1Q7Z7E8 422 aa10.15□□□□□ -0.78
SMARCE1-217ENST00000580654 SH3TC2Q8TF17 1288 aa10.15□□□□□ -0.78
SMARCE1-217ENST00000580654 DPF3Q92784 378 aa10.15□□□□□ -0.78
SMARCE1-217ENST00000580654 SLC10A4Q96EP9 437 aa10.15□□□□□ -0.78
SMARCE1-217ENST00000580654 COL25A1Q9BXS0 654 aaPredicted RBP10.15□□□□□ -0.78
SMARCE1-217ENST00000580654 SEC31BQ9NQW1 1179 aa10.15□□□□□ -0.78
SMARCE1-217ENST00000580654 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.15□□□□□ -0.78
SMARCE1-217ENST00000580654 GGA1Q9UJY5 639 aa10.15□□□□□ -0.78
SMARCE1-217ENST00000580654 TESPA1A2RU30 521 aaPredicted RBP10.14□□□□□ -0.79
SMARCE1-217ENST00000580654 PODNQ7Z5L7 613 aa10.14□□□□□ -0.79
SMARCE1-217ENST00000580654 NBPF11Q86T75 865 aa10.14□□□□□ -0.79
SMARCE1-217ENST00000580654 ZBED3Q96IU2 234 aaPredicted RBP10.14□□□□□ -0.79
SMARCE1-217ENST00000580654 ISCA1Q9BUE6 129 aa10.14□□□□□ -0.79
SMARCE1-217ENST00000580654 ANKIB1Q9P2G1 1089 aa10.14□□□□□ -0.79
SMARCE1-217ENST00000580654 COL1A1P02452 1464 aaPredicted RBP10.13□□□□□ -0.79
SMARCE1-217ENST00000580654 SPEF2Q9C093 1822 aa10.13□□□□□ -0.79
SMARCE1-217ENST00000580654 RTL5Q5HYW3 569 aaPredicted RBP10.13□□□□□ -0.79
SMARCE1-217ENST00000580654 APOBEC3FQ8IUX4 373 aaKnown RBP10.13□□□□□ -0.79
SMARCE1-217ENST00000580654 ZNF710Q8N1W2 664 aa10.13□□□□□ -0.79
SMARCE1-217ENST00000580654 CFAP53Q96M91 514 aa10.13□□□□□ -0.79
SMARCE1-217ENST00000580654 ARHGAP39Q9C0H5 1083 aa10.13□□□□□ -0.79
SMARCE1-217ENST00000580654 NUDCQ9Y266 331 aa10.13□□□□□ -0.79
SMARCE1-217ENST00000580654 ALPK3Q96L96 1907 aa10.12□□□□□ -0.79
SMARCE1-217ENST00000580654 A0A1W2PPC1 479 aa10.12□□□□□ -0.79
SMARCE1-217ENST00000580654 ATP5J2-PTCD1G3V325 749 aa10.12□□□□□ -0.79
SMARCE1-217ENST00000580654 ZBTB7BO15156 539 aaPredicted RBP10.12□□□□□ -0.79
SMARCE1-217ENST00000580654 MTFR1Q15390 333 aa10.12□□□□□ -0.79
SMARCE1-217ENST00000580654 IRS4O14654 1257 aaPredicted RBP10.11□□□□□ -0.79
SMARCE1-217ENST00000580654 OTUD7BQ6GQQ9 843 aa10.11□□□□□ -0.79
SMARCE1-217ENST00000580654 MS4A4AQ96JQ5 239 aa10.11□□□□□ -0.79
SMARCE1-217ENST00000580654 DEFB129Q9H1M3 183 aa10.11□□□□□ -0.79
SMARCE1-217ENST00000580654 OGFOD1Q8N543 542 aa10.1□□□□□ -0.79
SMARCE1-217ENST00000580654 PLEKHF1Q96S99 279 aa10.1□□□□□ -0.79
SMARCE1-217ENST00000580654 TSPYL4Q9UJ04 414 aa10.1□□□□□ -0.79
SMARCE1-217ENST00000580654 PCDHAC2Q9Y5I4 1007 aa10.1□□□□□ -0.79
SMARCE1-217ENST00000580654 MED23Q9ULK4 1368 aa10.1□□□□□ -0.79
SMARCE1-217ENST00000580654 XDHP47989 1333 aa10.09□□□□□ -0.79
SMARCE1-217ENST00000580654 AOX1Q06278 1338 aa10.09□□□□□ -0.79
SMARCE1-217ENST00000580654 MYO3BQ8WXR4 1341 aa10.09□□□□□ -0.79
SMARCE1-217ENST00000580654 SPTBN5Q9NRC6 3674 aaKnown RBP10.09□□□□□ -0.79
SMARCE1-217ENST00000580654 UNCXA6NJT0 531 aa10.09□□□□□ -0.79
SMARCE1-217ENST00000580654 USP2O75604 605 aaPredicted RBP10.09□□□□□ -0.79
SMARCE1-217ENST00000580654 ATP2B4P23634 1241 aa10.09□□□□□ -0.79
SMARCE1-217ENST00000580654 NFE2L2Q16236 605 aa10.09□□□□□ -0.79
SMARCE1-217ENST00000580654 STRIP1Q5VSL9 837 aa10.09□□□□□ -0.79
SMARCE1-217ENST00000580654 Q7L0L9 218 aa10.09□□□□□ -0.79
SMARCE1-217ENST00000580654 TXNRD3Q86VQ6 643 aa10.09□□□□□ -0.79
SMARCE1-217ENST00000580654 KIAA0825Q8IV33 1275 aa10.09□□□□□ -0.79
SMARCE1-217ENST00000580654 PLBD2Q8NHP8 589 aa10.09□□□□□ -0.79
SMARCE1-217ENST00000580654 BRI3BPQ8WY22 251 aa10.09□□□□□ -0.79
SMARCE1-217ENST00000580654 STXBP5LQ9Y2K9 1186 aa10.09□□□□□ -0.79
SMARCE1-217ENST00000580654 PPP1R12BO60237 982 aaPredicted RBP10.08□□□□□ -0.8
SMARCE1-217ENST00000580654 CTGFP29279 349 aa10.08□□□□□ -0.8
SMARCE1-217ENST00000580654 PPP2R1AP30153 589 aa10.08□□□□□ -0.8
SMARCE1-217ENST00000580654 GJA8P48165 433 aa10.08□□□□□ -0.8
SMARCE1-217ENST00000580654 PSEN1P49768 467 aa10.08□□□□□ -0.8
SMARCE1-217ENST00000580654 TAF1CQ15572 869 aaPredicted RBP10.08□□□□□ -0.8
SMARCE1-217ENST00000580654 KRT24Q2M2I5 525 aa10.08□□□□□ -0.8
SMARCE1-217ENST00000580654 NBPF12Q5TAG4 269 aaPredicted RBP10.08□□□□□ -0.8
SMARCE1-217ENST00000580654 GPR153Q6NV75 609 aa10.08□□□□□ -0.8
SMARCE1-217ENST00000580654 FAM43AQ8N2R8 423 aa10.08□□□□□ -0.8
SMARCE1-217ENST00000580654 FBXW7Q969H0 707 aa10.08□□□□□ -0.8
SMARCE1-217ENST00000580654 OPTNQ96CV9 577 aa10.08□□□□□ -0.8
SMARCE1-217ENST00000580654 HTATIP2Q9BUP3 242 aa10.08□□□□□ -0.8
SMARCE1-217ENST00000580654 STAP2Q9UGK3 403 aa10.08□□□□□ -0.8
SMARCE1-217ENST00000580654 MMP14P50281 582 aa10.07□□□□□ -0.8
SMARCE1-217ENST00000580654 LACTBP83111 547 aaPredicted RBP10.07□□□□□ -0.8
SMARCE1-217ENST00000580654 TRIM28Q13263 835 aaKnown RBP10.07□□□□□ -0.8
SMARCE1-217ENST00000580654 ARHGEF6Q15052 776 aa10.07□□□□□ -0.8
SMARCE1-217ENST00000580654 ANKRD13DQ6ZTN6 518 aa10.07□□□□□ -0.8
SMARCE1-217ENST00000580654 ANKRD13AQ8IZ07 590 aa10.07□□□□□ -0.8
SMARCE1-217ENST00000580654 DEFB123Q8N688 67 aa10.07□□□□□ -0.8
SMARCE1-217ENST00000580654 CCDC85AQ96PX6 553 aaPredicted RBP10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms