RNA–Protein interactions for RNA: ENST00000580569.1

RFFL-207, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 5

Gene RFFL, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-207ENST00000580569 TTLL7Q6ZT98 887 aa9.61□□□□□ -0.87
RFFL-207ENST00000580569 NUTM1Q86Y26 1132 aa9.61□□□□□ -0.87
RFFL-207ENST00000580569 ZNF622Q969S3 477 aaKnown RBP eCLIP9.61□□□□□ -0.87
RFFL-207ENST00000580569 POM121Q96HA1 1249 aa9.61□□□□□ -0.87
RFFL-207ENST00000580569 COPRSQ9NQ92 184 aa9.61□□□□□ -0.87
RFFL-207ENST00000580569 PA2G4Q9UQ80 394 aaKnown RBP9.61□□□□□ -0.87
RFFL-207ENST00000580569 TTC41PQ6P2S7 1318 aa9.6□□□□□ -0.87
RFFL-207ENST00000580569 WDR33Q9C0J8 1336 aaKnown RBP9.6□□□□□ -0.87
RFFL-207ENST00000580569 ERC2O15083 957 aa9.6□□□□□ -0.87
RFFL-207ENST00000580569 CD2BP2O95400 341 aaKnown RBP9.6□□□□□ -0.87
RFFL-207ENST00000580569 EIF5P55010 431 aaKnown RBP9.6□□□□□ -0.87
RFFL-207ENST00000580569 STYK1Q6J9G0 422 aa9.6□□□□□ -0.87
RFFL-207ENST00000580569 PRR5LQ6MZQ0 368 aa9.6□□□□□ -0.87
RFFL-207ENST00000580569 ERC1Q8IUD2 1116 aa9.6□□□□□ -0.87
RFFL-207ENST00000580569 CNKSR1Q969H4 720 aa9.6□□□□□ -0.87
RFFL-207ENST00000580569 ESYT1Q9BSJ8 1104 aa9.6□□□□□ -0.87
RFFL-207ENST00000580569 TMEM121BQ9BXQ6 578 aaPredicted RBP9.6□□□□□ -0.87
RFFL-207ENST00000580569 LAMB2P55268 1798 aa9.6□□□□□ -0.87
RFFL-207ENST00000580569 LAMA4Q16363 1823 aa9.59□□□□□ -0.87
RFFL-207ENST00000580569 AKAP11Q9UKA4 1901 aa9.59□□□□□ -0.87
RFFL-207ENST00000580569 A0A087WZG4 1122 aa9.59□□□□□ -0.87
RFFL-207ENST00000580569 EPB41L2O43491 1005 aaKnown RBP9.59□□□□□ -0.87
RFFL-207ENST00000580569 SRGNP10124 158 aa9.59□□□□□ -0.87
RFFL-207ENST00000580569 FOXO4P98177 505 aa9.59□□□□□ -0.87
RFFL-207ENST00000580569 PNMA8AQ86V59 439 aaPredicted RBP9.59□□□□□ -0.87
RFFL-207ENST00000580569 C7orf43Q8WVR3 580 aa9.59□□□□□ -0.87
RFFL-207ENST00000580569 ISCA1Q9BUE6 129 aa9.59□□□□□ -0.87
RFFL-207ENST00000580569 TMUB1Q9BVT8 246 aa9.59□□□□□ -0.87
RFFL-207ENST00000580569 BOLA1Q9Y3E2 137 aa9.59□□□□□ -0.87
RFFL-207ENST00000580569 LTBP1Q14766 1721 aa9.59□□□□□ -0.87
RFFL-207ENST00000580569 DDX60Q8IY21 1712 aaKnown RBP9.59□□□□□ -0.87
RFFL-207ENST00000580569 SPEF2Q9C093 1822 aa9.59□□□□□ -0.88
RFFL-207ENST00000580569 MYO5AQ9Y4I1 1855 aaKnown RBP9.58□□□□□ -0.88
RFFL-207ENST00000580569 ATP5J2-PTCD1G3V325 749 aa9.58□□□□□ -0.88
RFFL-207ENST00000580569 REC8O95072 547 aa9.58□□□□□ -0.88
RFFL-207ENST00000580569 CLCN1P35523 988 aa9.58□□□□□ -0.88
RFFL-207ENST00000580569 MDM2Q00987 491 aaPredicted RBP9.58□□□□□ -0.88
RFFL-207ENST00000580569 PTPN12Q05209 780 aaKnown RBP9.58□□□□□ -0.88
RFFL-207ENST00000580569 TRIM28Q13263 835 aaKnown RBP9.58□□□□□ -0.88
RFFL-207ENST00000580569 SKIV2LQ15477 1246 aaKnown RBP9.58□□□□□ -0.88
RFFL-207ENST00000580569 TBC1D9BQ66K14 1250 aa9.58□□□□□ -0.88
RFFL-207ENST00000580569 PRPF40BQ6NWY9 871 aaKnown RBP9.58□□□□□ -0.88
RFFL-207ENST00000580569 EAF2Q96CJ1 260 aaPredicted RBP9.58□□□□□ -0.88
RFFL-207ENST00000580569 TEX13AQ9BXU3 409 aaPredicted RBP9.58□□□□□ -0.88
RFFL-207ENST00000580569 IL25Q9H293 177 aa9.58□□□□□ -0.88
RFFL-207ENST00000580569 HACL1Q9UJ83 578 aa9.58□□□□□ -0.88
RFFL-207ENST00000580569 CCDC85CA6NKD9 419 aa9.57□□□□□ -0.88
RFFL-207ENST00000580569 GLRX3O76003 335 aaKnown RBP9.57□□□□□ -0.88
RFFL-207ENST00000580569 STARD3NLO95772 234 aa9.57□□□□□ -0.88
RFFL-207ENST00000580569 EPHX2P34913 555 aa9.57□□□□□ -0.88
RFFL-207ENST00000580569 RABEP1Q15276 862 aa9.57□□□□□ -0.88
RFFL-207ENST00000580569 CASC1Q6TDU7 716 aa9.57□□□□□ -0.88
RFFL-207ENST00000580569 BICDL1Q6ZP65 573 aa9.57□□□□□ -0.88
RFFL-207ENST00000580569 HSCBQ8IWL3 235 aa9.57□□□□□ -0.88
RFFL-207ENST00000580569 CNTROBQ8N137 903 aa9.57□□□□□ -0.88
RFFL-207ENST00000580569 CLASRPQ8N2M8 674 aaKnown RBP9.57□□□□□ -0.88
RFFL-207ENST00000580569 CCDC191Q8NCU4 936 aa9.57□□□□□ -0.88
RFFL-207ENST00000580569 JARID2Q92833 1246 aaPredicted RBP9.57□□□□□ -0.88
RFFL-207ENST00000580569 CCDC97Q96F63 343 aaPredicted RBP9.57□□□□□ -0.88
RFFL-207ENST00000580569 MASTLQ96GX5 879 aa9.57□□□□□ -0.88
RFFL-207ENST00000580569 GPCPD1Q9NPB8 672 aa9.57□□□□□ -0.88
RFFL-207ENST00000580569 A0A1B0GUL6 1792 aa9.57□□□□□ -0.88
RFFL-207ENST00000580569 ARAP2Q8WZ64 1704 aa9.56□□□□□ -0.88
RFFL-207ENST00000580569 TCHHQ07283 1943 aa9.56□□□□□ -0.88
RFFL-207ENST00000580569 RAD21O60216 631 aa9.56□□□□□ -0.88
RFFL-207ENST00000580569 TBC1D12O60347 775 aa9.56□□□□□ -0.88
RFFL-207ENST00000580569 EVI5O60447 810 aa9.56□□□□□ -0.88
RFFL-207ENST00000580569 ECE1P42892 770 aa9.56□□□□□ -0.88
RFFL-207ENST00000580569 G3BP1Q13283 466 aaKnown RBP eCLIP9.56□□□□□ -0.88
RFFL-207ENST00000580569 TCIRG1Q13488 830 aa9.56□□□□□ -0.88
RFFL-207ENST00000580569 CCDC93Q567U6 631 aa9.56□□□□□ -0.88
RFFL-207ENST00000580569 EAPPQ56P03 285 aaPredicted RBP9.56□□□□□ -0.88
RFFL-207ENST00000580569 UBE3BQ7Z3V4 1068 aa9.56□□□□□ -0.88
RFFL-207ENST00000580569 PROCA1Q8NCQ7 364 aaPredicted RBP9.56□□□□□ -0.88
RFFL-207ENST00000580569 KLHDC4Q8TBB5 520 aa9.56□□□□□ -0.88
RFFL-207ENST00000580569 BCL11AQ9H165 835 aa9.56□□□□□ -0.88
RFFL-207ENST00000580569 SLKQ9H2G2 1235 aaPredicted RBP9.56□□□□□ -0.88
RFFL-207ENST00000580569 CDHR5Q9HBB8 845 aa9.56□□□□□ -0.88
RFFL-207ENST00000580569 ECHDC1Q9NTX5 307 aa9.56□□□□□ -0.88
RFFL-207ENST00000580569 CWC25Q9NXE8 425 aaPredicted RBP9.56□□□□□ -0.88
RFFL-207ENST00000580569 ZNF541Q9H0D2 1346 aa9.56□□□□□ -0.88
RFFL-207ENST00000580569 KLRG2A4D1S0 409 aaPredicted RBP9.55□□□□□ -0.88
RFFL-207ENST00000580569 TRIM6-TRIM34B2RNG4 842 aa9.55□□□□□ -0.88
RFFL-207ENST00000580569 G3V3G9 751 aa9.55□□□□□ -0.88
RFFL-207ENST00000580569 K7ELQ4 463 aaPredicted RBP9.55□□□□□ -0.88
RFFL-207ENST00000580569 FZD9O00144 591 aa9.55□□□□□ -0.88
RFFL-207ENST00000580569 SGSM2O43147 1006 aa9.55□□□□□ -0.88
RFFL-207ENST00000580569 FRAT2O75474 233 aaPredicted RBP9.55□□□□□ -0.88
RFFL-207ENST00000580569 IL6STP40189 918 aaPredicted RBP9.55□□□□□ -0.88
RFFL-207ENST00000580569 FKBP4Q02790 459 aaKnown RBP eCLIP9.55□□□□□ -0.88
RFFL-207ENST00000580569 GPC2Q8N158 579 aa9.55□□□□□ -0.88
RFFL-207ENST00000580569 CNBD1Q8NA66 436 aa9.55□□□□□ -0.88
RFFL-207ENST00000580569 RILPL2Q969X0 211 aa9.55□□□□□ -0.88
RFFL-207ENST00000580569 PHOX2BQ99453 314 aa9.55□□□□□ -0.88
RFFL-207ENST00000580569 BEGAINQ9BUH8 593 aa9.55□□□□□ -0.88
RFFL-207ENST00000580569 SNRKQ9NRH2 765 aa9.55□□□□□ -0.88
RFFL-207ENST00000580569 SERPINA10Q9UK55 444 aa9.55□□□□□ -0.88
RFFL-207ENST00000580569 SNED1Q8TER0 1413 aa9.55□□□□□ -0.88
RFFL-207ENST00000580569 CA12O43570 354 aa9.54□□□□□ -0.88
RFFL-207ENST00000580569 SSTR3P32745 418 aaPredicted RBP9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms