RNA–Protein interactions for RNA: ENST00000580541.1

SKA2-205, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 3 BASIC

Gene SKA2, Length 689 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-205ENST00000580541 USP17L4A6NCW7 530 aa17.39■□□□□ 0.37
SKA2-205ENST00000580541 STRIP1Q5VSL9 837 aa17.39■□□□□ 0.37
SKA2-205ENST00000580541 SPTY2D1Q68D10 685 aaPredicted RBP17.39■□□□□ 0.37
SKA2-205ENST00000580541 USP17L1Q7RTZ2 530 aa17.39■□□□□ 0.37
SKA2-205ENST00000580541 SPATA5Q8NB90 893 aa17.39■□□□□ 0.37
SKA2-205ENST00000580541 RNF181Q9P0P0 153 aa17.39■□□□□ 0.37
SKA2-205ENST00000580541 ARAP2Q8WZ64 1704 aa17.38■□□□□ 0.37
SKA2-205ENST00000580541 KCNA4P22459 653 aa17.38■□□□□ 0.37
SKA2-205ENST00000580541 LRRFIP1Q32MZ4 808 aaKnown RBP17.38■□□□□ 0.37
SKA2-205ENST00000580541 C9orf131Q5VYM1 1079 aa17.38■□□□□ 0.37
SKA2-205ENST00000580541 HAUS7Q99871 368 aa17.38■□□□□ 0.37
SKA2-205ENST00000580541 BOLA2Q9H3K6 86 aa17.38■□□□□ 0.37
SKA2-205ENST00000580541 ZC3H4Q9UPT8 1303 aaKnown RBP17.38■□□□□ 0.37
SKA2-205ENST00000580541 FZD9O00144 591 aa17.37■□□□□ 0.37
SKA2-205ENST00000580541 MMP14P50281 582 aa17.37■□□□□ 0.37
SKA2-205ENST00000580541 FKBP1AP62942 108 aaKnown RBP17.37■□□□□ 0.37
SKA2-205ENST00000580541 GTF2IP78347 998 aa17.37■□□□□ 0.37
SKA2-205ENST00000580541 DPY19L2Q6NUT2 758 aa17.37■□□□□ 0.37
SKA2-205ENST00000580541 OTUD7AQ8TE49 926 aaPredicted RBP17.37■□□□□ 0.37
SKA2-205ENST00000580541 FBXW7Q969H0 707 aa17.37■□□□□ 0.37
SKA2-205ENST00000580541 SUGT1Q9Y2Z0 365 aa17.37■□□□□ 0.37
SKA2-205ENST00000580541 FAM205AQ6ZU69 1335 aa17.37■□□□□ 0.37
SKA2-205ENST00000580541 SALL3Q9BXA9 1300 aa17.37■□□□□ 0.37
SKA2-205ENST00000580541 CCDC88AQ3V6T2 1871 aa17.37■□□□□ 0.37
SKA2-205ENST00000580541 SBF1O95248 1867 aa17.36■□□□□ 0.37
SKA2-205ENST00000580541 PDE4AP27815 886 aa17.36■□□□□ 0.37
SKA2-205ENST00000580541 MCAMP43121 646 aa17.36■□□□□ 0.37
SKA2-205ENST00000580541 RGS3P49796 1198 aa17.36■□□□□ 0.37
SKA2-205ENST00000580541 CHAF1AQ13111 956 aaPredicted RBP17.36■□□□□ 0.37
SKA2-205ENST00000580541 RASGRF1Q13972 1273 aa17.36■□□□□ 0.37
SKA2-205ENST00000580541 CIAPIN1Q6FI81 312 aa17.36■□□□□ 0.37
SKA2-205ENST00000580541 TMED8Q6PL24 325 aaPredicted RBP17.36■□□□□ 0.37
SKA2-205ENST00000580541 TICAM2Q86XR7 235 aa17.36■□□□□ 0.37
SKA2-205ENST00000580541 HMG20BQ9P0W2 317 aa17.36■□□□□ 0.37
SKA2-205ENST00000580541 IQSEC3Q9UPP2 1182 aaPredicted RBP17.36■□□□□ 0.37
SKA2-205ENST00000580541 MYO3BQ8WXR4 1341 aa17.36■□□□□ 0.37
SKA2-205ENST00000580541 GOLGB1Q14789 3259 aaKnown RBP17.36■□□□□ 0.37
SKA2-205ENST00000580541 DICER1Q9UPY3 1922 aaKnown RBP17.35■□□□□ 0.37
SKA2-205ENST00000580541 CNTROBQ8N137 903 aa17.35■□□□□ 0.37
SKA2-205ENST00000580541 PI4K2BQ8TCG2 481 aa17.35■□□□□ 0.37
SKA2-205ENST00000580541 DNAJC2Q99543 621 aaKnown RBP17.35■□□□□ 0.37
SKA2-205ENST00000580541 VIL1P09327 827 aaKnown RBP17.34■□□□□ 0.37
SKA2-205ENST00000580541 ZSCAN25Q6NSZ9 544 aa17.34■□□□□ 0.37
SKA2-205ENST00000580541 SLF2Q8IX21 1173 aa17.34■□□□□ 0.37
SKA2-205ENST00000580541 EVI5LQ96CN4 794 aa17.34■□□□□ 0.37
SKA2-205ENST00000580541 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.34■□□□□ 0.37
SKA2-205ENST00000580541 SNRKQ9NRH2 765 aa17.34■□□□□ 0.37
SKA2-205ENST00000580541 SALL1Q9NSC2 1324 aa17.34■□□□□ 0.37
SKA2-205ENST00000580541 PAG1Q9NWQ8 432 aa17.34■□□□□ 0.37
SKA2-205ENST00000580541 LRP2BPQ9P2M1 347 aa17.34■□□□□ 0.37
SKA2-205ENST00000580541 YDJCA8MPS7 323 aa17.33■□□□□ 0.36
SKA2-205ENST00000580541 TRIM6-TRIM34B2RNG4 842 aa17.33■□□□□ 0.36
SKA2-205ENST00000580541 RAD17O75943 681 aa17.33■□□□□ 0.36
SKA2-205ENST00000580541 RPS12P25398 132 aaKnown RBP17.33■□□□□ 0.36
SKA2-205ENST00000580541 ZAP70P43403 619 aa17.33■□□□□ 0.36
SKA2-205ENST00000580541 CXCL9Q07325 125 aa17.33■□□□□ 0.36
SKA2-205ENST00000580541 MAP3K12Q12852 859 aa17.33■□□□□ 0.36
SKA2-205ENST00000580541 MFSD14BQ5SR56 506 aa17.33■□□□□ 0.36
SKA2-205ENST00000580541 ERICH6Q7L0X2 663 aa17.33■□□□□ 0.36
SKA2-205ENST00000580541 AGBL3Q8NEM8 1001 aa17.33■□□□□ 0.36
SKA2-205ENST00000580541 ABCF2Q9UG63 623 aa17.33■□□□□ 0.36
SKA2-205ENST00000580541 MAST3O60307 1309 aa17.32■□□□□ 0.36
SKA2-205ENST00000580541 MYH13Q9UKX3 1938 aa17.32■□□□□ 0.36
SKA2-205ENST00000580541 GOLIM4O00461 696 aa17.32■□□□□ 0.36
SKA2-205ENST00000580541 LDHBP07195 334 aaKnown RBP17.32■□□□□ 0.36
SKA2-205ENST00000580541 SCARF1Q14162 830 aa17.32■□□□□ 0.36
SKA2-205ENST00000580541 TTC22Q5TAA0 569 aa17.32■□□□□ 0.36
SKA2-205ENST00000580541 TSHZ3Q63HK5 1081 aa17.32■□□□□ 0.36
SKA2-205ENST00000580541 RSBN1LQ6PCB5 846 aaPredicted RBP17.32■□□□□ 0.36
SKA2-205ENST00000580541 GPC2Q8N158 579 aa17.32■□□□□ 0.36
SKA2-205ENST00000580541 OGFOD1Q8N543 542 aa17.32■□□□□ 0.36
SKA2-205ENST00000580541 PSMD14O00487 310 aa17.31■□□□□ 0.36
SKA2-205ENST00000580541 CYP2E1P05181 493 aaPredicted RBP17.31■□□□□ 0.36
SKA2-205ENST00000580541 PRELPP51888 382 aa17.31■□□□□ 0.36
SKA2-205ENST00000580541 GSTO1P78417 241 aa17.31■□□□□ 0.36
SKA2-205ENST00000580541 DACT2Q5SW24 774 aa17.31■□□□□ 0.36
SKA2-205ENST00000580541 RILPL2Q969X0 211 aa17.31■□□□□ 0.36
SKA2-205ENST00000580541 HDAC9Q9UKV0 1011 aa17.31■□□□□ 0.36
SKA2-205ENST00000580541 HIP1O00291 1037 aa17.3■□□□□ 0.36
SKA2-205ENST00000580541 LDHCP07864 332 aa17.3■□□□□ 0.36
SKA2-205ENST00000580541 ZFYP08048 801 aaPredicted RBP17.3■□□□□ 0.36
SKA2-205ENST00000580541 BMP2KLQ5H9B9 411 aa17.3■□□□□ 0.36
SKA2-205ENST00000580541 DPF2Q92785 391 aa17.3■□□□□ 0.36
SKA2-205ENST00000580541 MRIQ9BWK5 157 aa17.3■□□□□ 0.36
SKA2-205ENST00000580541 KCNQ5Q9NR82 932 aa17.3■□□□□ 0.36
SKA2-205ENST00000580541 RAI14Q9P0K7 980 aa17.3■□□□□ 0.36
SKA2-205ENST00000580541 GJA3Q9Y6H8 435 aa17.3■□□□□ 0.36
SKA2-205ENST00000580541 AKAP11Q9UKA4 1901 aa17.29■□□□□ 0.36
SKA2-205ENST00000580541 IDH1O75874 414 aaKnown RBP17.29■□□□□ 0.36
SKA2-205ENST00000580541 DZIP1Q86YF9 867 aaKnown RBP17.29■□□□□ 0.36
SKA2-205ENST00000580541 KBTBD3Q8NAB2 608 aa17.29■□□□□ 0.36
SKA2-205ENST00000580541 FSD1Q9BTV5 496 aa17.29■□□□□ 0.36
SKA2-205ENST00000580541 HDLBPQ00341 1268 aaKnown RBP17.28■□□□□ 0.36
SKA2-205ENST00000580541 PI16Q6UXB8 463 aa17.28■□□□□ 0.36
SKA2-205ENST00000580541 TBC1D9Q6ZT07 1266 aa17.28■□□□□ 0.36
SKA2-205ENST00000580541 JAG2Q9Y219 1238 aa17.28■□□□□ 0.36
SKA2-205ENST00000580541 GLTPD2A6NH11 291 aa17.27■□□□□ 0.36
SKA2-205ENST00000580541 H7C1D1 291 aa17.27■□□□□ 0.36
SKA2-205ENST00000580541 MAP4K4O95819 1239 aaPredicted RBP17.27■□□□□ 0.36
SKA2-205ENST00000580541 USP17L8P0C7I0 530 aa17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms