RNA–Protein interactions for RNA: ENST00000580237.5

NDEL1-208, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

TSL 4

Gene NDEL1, Length 577 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-208ENST00000580237 SCARF1Q14162 830 aa13.54□□□□□ -0.24
NDEL1-208ENST00000580237 ATP2B3Q16720 1220 aa13.54□□□□□ -0.24
NDEL1-208ENST00000580237 ANGEL2Q5VTE6 544 aaKnown RBP13.54□□□□□ -0.24
NDEL1-208ENST00000580237 USP48Q86UV5 1035 aa13.54□□□□□ -0.24
NDEL1-208ENST00000580237 CEP126Q9P2H0 1117 aa13.54□□□□□ -0.24
NDEL1-208ENST00000580237 PGAP2Q9UHJ9 254 aa13.54□□□□□ -0.24
NDEL1-208ENST00000580237 RCAN3Q9UKA8 241 aa13.54□□□□□ -0.24
NDEL1-208ENST00000580237 IQSEC3Q9UPP2 1182 aaPredicted RBP13.54□□□□□ -0.24
NDEL1-208ENST00000580237 PA2G4Q9UQ80 394 aaKnown RBP13.54□□□□□ -0.24
NDEL1-208ENST00000580237 ASTN2O75129 1339 aaPredicted RBP13.54□□□□□ -0.24
NDEL1-208ENST00000580237 MMP14P50281 582 aa13.53□□□□□ -0.24
NDEL1-208ENST00000580237 GRM1Q13255 1194 aa13.53□□□□□ -0.24
NDEL1-208ENST00000580237 MFSD14BQ5SR56 506 aa13.53□□□□□ -0.24
NDEL1-208ENST00000580237 FAM84BQ96KN1 310 aaPredicted RBP13.53□□□□□ -0.24
NDEL1-208ENST00000580237 RLBP1P12271 317 aa13.52□□□□□ -0.25
NDEL1-208ENST00000580237 RBM5P52756 815 aaKnown RBP eCLIP13.52□□□□□ -0.25
NDEL1-208ENST00000580237 MTX1Q13505 466 aa13.52□□□□□ -0.25
NDEL1-208ENST00000580237 DLGAP5Q15398 846 aa13.52□□□□□ -0.25
NDEL1-208ENST00000580237 ATG9AQ7Z3C6 839 aa13.52□□□□□ -0.25
NDEL1-208ENST00000580237 CERS5Q8N5B7 392 aa13.52□□□□□ -0.25
NDEL1-208ENST00000580237 TDRD7Q8NHU6 1098 aaKnown RBP13.52□□□□□ -0.25
NDEL1-208ENST00000580237 LPIN2Q92539 896 aa13.52□□□□□ -0.25
NDEL1-208ENST00000580237 YTHDC1Q96MU7 727 aaKnown RBP13.52□□□□□ -0.25
NDEL1-208ENST00000580237 C1orf115Q9H7X2 142 aa13.52□□□□□ -0.25
NDEL1-208ENST00000580237 COPRSQ9NQ92 184 aa13.52□□□□□ -0.25
NDEL1-208ENST00000580237 PITPNM2Q9BZ72 1349 aa13.52□□□□□ -0.25
NDEL1-208ENST00000580237 PAPPA2Q9BXP8 1791 aa13.51□□□□□ -0.25
NDEL1-208ENST00000580237 FAM205AQ6ZU69 1335 aa13.51□□□□□ -0.25
NDEL1-208ENST00000580237 MYO1BO43795 1136 aa13.51□□□□□ -0.25
NDEL1-208ENST00000580237 FKBP1AP62942 108 aaKnown RBP13.51□□□□□ -0.25
NDEL1-208ENST00000580237 OS9Q13438 667 aaPredicted RBP13.51□□□□□ -0.25
NDEL1-208ENST00000580237 DEFB115Q30KQ5 88 aa13.51□□□□□ -0.25
NDEL1-208ENST00000580237 NBPF9Q3BBW0 867 aa13.51□□□□□ -0.25
NDEL1-208ENST00000580237 PANK1Q8TE04 598 aa13.51□□□□□ -0.25
NDEL1-208ENST00000580237 THSD7BQ9C0I4 1608 aa13.5□□□□□ -0.25
NDEL1-208ENST00000580237 RASSF10A6NK89 507 aa13.5□□□□□ -0.25
NDEL1-208ENST00000580237 WNT10BO00744 389 aa13.5□□□□□ -0.25
NDEL1-208ENST00000580237 FGFR2P21802 821 aa13.5□□□□□ -0.25
NDEL1-208ENST00000580237 ECE1P42892 770 aa13.5□□□□□ -0.25
NDEL1-208ENST00000580237 BCAMP50895 628 aa13.5□□□□□ -0.25
NDEL1-208ENST00000580237 FBXO33Q7Z6M2 555 aa13.5□□□□□ -0.25
NDEL1-208ENST00000580237 APOBEC3FQ8IUX4 373 aaKnown RBP13.5□□□□□ -0.25
NDEL1-208ENST00000580237 JMYQ8N9B5 988 aa13.5□□□□□ -0.25
NDEL1-208ENST00000580237 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.5□□□□□ -0.25
NDEL1-208ENST00000580237 TBC1D22AQ8WUA7 517 aa13.5□□□□□ -0.25
NDEL1-208ENST00000580237 CDCA5Q96FF9 252 aa13.5□□□□□ -0.25
NDEL1-208ENST00000580237 GNL3LQ9NVN8 582 aaKnown RBP13.5□□□□□ -0.25
NDEL1-208ENST00000580237 TTF2Q9UNY4 1162 aaKnown RBP13.5□□□□□ -0.25
NDEL1-208ENST00000580237 TLL2Q9Y6L7 1015 aa13.5□□□□□ -0.25
NDEL1-208ENST00000580237 PNMA6EA0A0J9YXQ4 647 aa13.49□□□□□ -0.25
NDEL1-208ENST00000580237 NF2P35240 595 aa13.49□□□□□ -0.25
NDEL1-208ENST00000580237 VEGFBP49765 207 aa13.49□□□□□ -0.25
NDEL1-208ENST00000580237 G3BP1Q13283 466 aaKnown RBP eCLIP13.49□□□□□ -0.25
NDEL1-208ENST00000580237 CFAP100Q494V2 611 aa13.49□□□□□ -0.25
NDEL1-208ENST00000580237 CST9Q5W186 159 aa13.49□□□□□ -0.25
NDEL1-208ENST00000580237 DLK2Q6UY11 383 aa13.49□□□□□ -0.25
NDEL1-208ENST00000580237 C2orf69Q8N8R5 385 aa13.49□□□□□ -0.25
NDEL1-208ENST00000580237 GBA2Q9HCG7 927 aaPredicted RBP13.49□□□□□ -0.25
NDEL1-208ENST00000580237 AKAP2Q9Y2D5 859 aa13.49□□□□□ -0.25
NDEL1-208ENST00000580237 COL1A1P02452 1464 aaPredicted RBP13.48□□□□□ -0.25
NDEL1-208ENST00000580237 MAST3O60307 1309 aa13.48□□□□□ -0.25
NDEL1-208ENST00000580237 TFCP2Q12800 502 aa13.48□□□□□ -0.25
NDEL1-208ENST00000580237 CAPNS2Q96L46 248 aa13.48□□□□□ -0.25
NDEL1-208ENST00000580237 VEZTQ9HBM0 779 aa13.48□□□□□ -0.25
NDEL1-208ENST00000580237 SCAF8Q9UPN6 1271 aaKnown RBP13.48□□□□□ -0.25
NDEL1-208ENST00000580237 AK9Q5TCS8 1911 aa13.48□□□□□ -0.25
NDEL1-208ENST00000580237 MYH2Q9UKX2 1941 aa13.48□□□□□ -0.25
NDEL1-208ENST00000580237 WDR33Q9C0J8 1336 aaKnown RBP13.47□□□□□ -0.25
NDEL1-208ENST00000580237 HUNKP57058 714 aa13.47□□□□□ -0.25
NDEL1-208ENST00000580237 TTLL12Q14166 644 aaPredicted RBP13.47□□□□□ -0.25
NDEL1-208ENST00000580237 MVPQ14764 893 aaKnown RBP13.47□□□□□ -0.25
NDEL1-208ENST00000580237 GORABQ5T7V8 394 aa13.47□□□□□ -0.25
NDEL1-208ENST00000580237 CYP4F22Q6NT55 531 aa13.47□□□□□ -0.25
NDEL1-208ENST00000580237 SAPCD2Q86UD0 394 aa13.47□□□□□ -0.25
NDEL1-208ENST00000580237 AIDAQ96BJ3 306 aa13.47□□□□□ -0.25
NDEL1-208ENST00000580237 DDX19BQ9UMR2 479 aa13.47□□□□□ -0.25
NDEL1-208ENST00000580237 A0A1B0GUL7 405 aa13.46□□□□□ -0.25
NDEL1-208ENST00000580237 CLRN2A0PK11 232 aa13.46□□□□□ -0.25
NDEL1-208ENST00000580237 SPDYE2BA6NHP3 402 aa13.46□□□□□ -0.25
NDEL1-208ENST00000580237 ZBTB7BO15156 539 aaPredicted RBP13.46□□□□□ -0.25
NDEL1-208ENST00000580237 SPDYE6P0CI01 402 aa13.46□□□□□ -0.25
NDEL1-208ENST00000580237 HSPA1AP0DMV8 641 aaKnown RBP13.46□□□□□ -0.25
NDEL1-208ENST00000580237 HSPA1BP0DMV9 641 aaKnown RBP13.46□□□□□ -0.25
NDEL1-208ENST00000580237 ADORA1P30542 326 aa13.46□□□□□ -0.25
NDEL1-208ENST00000580237 WDR66Q8TBY9 1149 aa13.46□□□□□ -0.25
NDEL1-208ENST00000580237 NEUROD6Q96NK8 337 aa13.46□□□□□ -0.25
NDEL1-208ENST00000580237 CHMP4BQ9H444 224 aaKnown RBP13.46□□□□□ -0.25
NDEL1-208ENST00000580237 SERPINA10Q9UK55 444 aa13.46□□□□□ -0.25
NDEL1-208ENST00000580237 COG6Q9Y2V7 657 aa13.46□□□□□ -0.25
NDEL1-208ENST00000580237 AKAP11Q9UKA4 1901 aa13.45□□□□□ -0.26
NDEL1-208ENST00000580237 SEMA3EO15041 775 aa13.45□□□□□ -0.26
NDEL1-208ENST00000580237 SURF6O75683 361 aaKnown RBP13.45□□□□□ -0.26
NDEL1-208ENST00000580237 PHKA1P46020 1223 aa13.45□□□□□ -0.26
NDEL1-208ENST00000580237 CRKP46108 304 aa13.45□□□□□ -0.26
NDEL1-208ENST00000580237 POLA2Q14181 598 aa13.45□□□□□ -0.26
NDEL1-208ENST00000580237 MTMR14Q8NCE2 650 aa13.45□□□□□ -0.26
NDEL1-208ENST00000580237 TEKT1Q969V4 418 aa13.45□□□□□ -0.26
NDEL1-208ENST00000580237 TMOD2Q9NZR1 351 aa13.45□□□□□ -0.26
NDEL1-208ENST00000580237 DENND2AQ9ULE3 1009 aa13.45□□□□□ -0.26
NDEL1-208ENST00000580237 PCDHAC2Q9Y5I4 1007 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms