RNA–Protein interactions for RNA: ENST00000579618.1

SNRPD1-203, Transcript of small nuclear ribonucleoprotein D1 polypeptide, humanhuman

TSL 5 BASIC

Gene SNRPD1, Length 320 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPD1-203ENST00000579618 KSR2Q6VAB6 950 aa12.92□□□□□ -0.34
SNRPD1-203ENST00000579618 G2E3Q7L622 706 aa12.92□□□□□ -0.34
SNRPD1-203ENST00000579618 DZIP1LQ8IYY4 767 aaKnown RBP12.92□□□□□ -0.34
SNRPD1-203ENST00000579618 ZNF333Q96JL9 665 aa12.92□□□□□ -0.34
SNRPD1-203ENST00000579618 PHAXQ9H814 394 aaKnown RBP12.92□□□□□ -0.34
SNRPD1-203ENST00000579618 OTOFQ9HC10 1997 aa12.92□□□□□ -0.34
SNRPD1-203ENST00000579618 CRHR2Q13324 411 aa12.91□□□□□ -0.34
SNRPD1-203ENST00000579618 CHRDL2Q6WN34 429 aa12.91□□□□□ -0.34
SNRPD1-203ENST00000579618 ANKRD13DQ6ZTN6 518 aa12.91□□□□□ -0.34
SNRPD1-203ENST00000579618 PLBD2Q8NHP8 589 aa12.91□□□□□ -0.34
SNRPD1-203ENST00000579618 FBXW7Q969H0 707 aa12.91□□□□□ -0.34
SNRPD1-203ENST00000579618 WNK4Q96J92 1243 aa12.91□□□□□ -0.34
SNRPD1-203ENST00000579618 CLMNQ96JQ2 1002 aa12.91□□□□□ -0.34
SNRPD1-203ENST00000579618 CHMP4BQ9H444 224 aaKnown RBP12.91□□□□□ -0.34
SNRPD1-203ENST00000579618 EFCC1Q9HA90 598 aa12.91□□□□□ -0.34
SNRPD1-203ENST00000579618 ECM29Q5VYK3 1845 aa12.9□□□□□ -0.34
SNRPD1-203ENST00000579618 PI4KAP2A4QPH2 592 aa12.9□□□□□ -0.34
SNRPD1-203ENST00000579618 PLIN1O60240 522 aa12.9□□□□□ -0.34
SNRPD1-203ENST00000579618 CCT4P50991 539 aaKnown RBP12.9□□□□□ -0.34
SNRPD1-203ENST00000579618 AAMPQ13685 434 aa12.9□□□□□ -0.34
SNRPD1-203ENST00000579618 DACT2Q5SW24 774 aa12.9□□□□□ -0.34
SNRPD1-203ENST00000579618 RIC3Q7Z5B4 369 aa12.9□□□□□ -0.34
SNRPD1-203ENST00000579618 PODNQ7Z5L7 613 aa12.9□□□□□ -0.34
SNRPD1-203ENST00000579618 PI4KAP1Q8N8J0 262 aa12.9□□□□□ -0.34
SNRPD1-203ENST00000579618 DNAAF4Q8WXU2 420 aa12.9□□□□□ -0.34
SNRPD1-203ENST00000579618 CCDC85AQ96PX6 553 aaPredicted RBP12.9□□□□□ -0.34
SNRPD1-203ENST00000579618 TMEM106CQ9BVX2 250 aa12.9□□□□□ -0.34
SNRPD1-203ENST00000579618 COL1A1P02452 1464 aaPredicted RBP12.9□□□□□ -0.34
SNRPD1-203ENST00000579618 XDHP47989 1333 aa12.89□□□□□ -0.35
SNRPD1-203ENST00000579618 MYCP01106 439 aaPredicted RBP12.89□□□□□ -0.35
SNRPD1-203ENST00000579618 ZBTB48P10074 688 aaPredicted RBP12.89□□□□□ -0.35
SNRPD1-203ENST00000579618 GJA5P36382 358 aa12.89□□□□□ -0.35
SNRPD1-203ENST00000579618 NEXNQ0ZGT2 675 aa12.89□□□□□ -0.35
SNRPD1-203ENST00000579618 SLC17A8Q8NDX2 589 aa12.89□□□□□ -0.35
SNRPD1-203ENST00000579618 RBM27Q9P2N5 1060 aaKnown RBP12.89□□□□□ -0.35
SNRPD1-203ENST00000579618 PTCH2Q9Y6C5 1203 aa12.89□□□□□ -0.35
SNRPD1-203ENST00000579618 MED23Q9ULK4 1368 aa12.89□□□□□ -0.35
SNRPD1-203ENST00000579618 INHBEP58166 350 aa12.88□□□□□ -0.35
SNRPD1-203ENST00000579618 SP3Q02447 781 aa12.88□□□□□ -0.35
SNRPD1-203ENST00000579618 ERICH6BQ5W0A0 696 aa12.88□□□□□ -0.35
SNRPD1-203ENST00000579618 APOBEC3FQ8IUX4 373 aaKnown RBP12.88□□□□□ -0.35
SNRPD1-203ENST00000579618 OGFOD1Q8N543 542 aa12.88□□□□□ -0.35
SNRPD1-203ENST00000579618 SLC10A4Q96EP9 437 aa12.88□□□□□ -0.35
SNRPD1-203ENST00000579618 MAP3K2Q9Y2U5 619 aa12.88□□□□□ -0.35
SNRPD1-203ENST00000579618 KIAA0100Q14667 2235 aaKnown RBP12.88□□□□□ -0.35
SNRPD1-203ENST00000579618 COL6A3P12111 3177 aa12.87□□□□□ -0.35
SNRPD1-203ENST00000579618 ATP2B4P23634 1241 aa12.87□□□□□ -0.35
SNRPD1-203ENST00000579618 MVPQ14764 893 aaKnown RBP12.87□□□□□ -0.35
SNRPD1-203ENST00000579618 MAP3K11Q16584 847 aa12.87□□□□□ -0.35
SNRPD1-203ENST00000579618 SLC4A8Q2Y0W8 1093 aa12.87□□□□□ -0.35
SNRPD1-203ENST00000579618 SLC9C1Q4G0N8 1177 aa12.87□□□□□ -0.35
SNRPD1-203ENST00000579618 LINS1Q8NG48 757 aa12.87□□□□□ -0.35
SNRPD1-203ENST00000579618 CLUAP1Q96AJ1 413 aa12.87□□□□□ -0.35
SNRPD1-203ENST00000579618 PTPN18Q99952 460 aa12.87□□□□□ -0.35
SNRPD1-203ENST00000579618 METTL22Q9BUU2 404 aaPredicted RBP12.87□□□□□ -0.35
SNRPD1-203ENST00000579618 DDX19BQ9UMR2 479 aa12.87□□□□□ -0.35
SNRPD1-203ENST00000579618 MYO3BQ8WXR4 1341 aa12.87□□□□□ -0.35
SNRPD1-203ENST00000579618 F6X3S4 739 aa12.86□□□□□ -0.35
SNRPD1-203ENST00000579618 ALDH1L1O75891 902 aa12.86□□□□□ -0.35
SNRPD1-203ENST00000579618 CCDC152Q4G0S7 254 aa12.86□□□□□ -0.35
SNRPD1-203ENST00000579618 SLC4A10Q6U841 1118 aa12.86□□□□□ -0.35
SNRPD1-203ENST00000579618 KIAA0825Q8IV33 1275 aa12.86□□□□□ -0.35
SNRPD1-203ENST00000579618 JARID2Q92833 1246 aaPredicted RBP12.86□□□□□ -0.35
SNRPD1-203ENST00000579618 ZBED3Q96IU2 234 aaPredicted RBP12.86□□□□□ -0.35
SNRPD1-203ENST00000579618 SRCIN1Q9C0H9 1055 aa12.86□□□□□ -0.35
SNRPD1-203ENST00000579618 RLBP1P12271 317 aa12.85□□□□□ -0.35
SNRPD1-203ENST00000579618 TRIM28Q13263 835 aaKnown RBP12.85□□□□□ -0.35
SNRPD1-203ENST00000579618 BEND3Q5T5X7 828 aa12.85□□□□□ -0.35
SNRPD1-203ENST00000579618 ANKRD18AQ8IVF6 992 aa12.85□□□□□ -0.35
SNRPD1-203ENST00000579618 ITPRIPQ8IWB1 547 aa12.85□□□□□ -0.35
SNRPD1-203ENST00000579618 TMEM57Q8N5G2 664 aa12.85□□□□□ -0.35
SNRPD1-203ENST00000579618 ZBTB38Q8NAP3 1195 aaPredicted RBP12.85□□□□□ -0.35
SNRPD1-203ENST00000579618 PANK1Q8TE04 598 aa12.85□□□□□ -0.35
SNRPD1-203ENST00000579618 DEFB129Q9H1M3 183 aa12.85□□□□□ -0.35
SNRPD1-203ENST00000579618 HDAC5Q9UQL6 1122 aa12.85□□□□□ -0.35
SNRPD1-203ENST00000579618 PCDHAC2Q9Y5I4 1007 aa12.85□□□□□ -0.35
SNRPD1-203ENST00000579618 RANBP2P49792 3224 aaKnown RBP12.85□□□□□ -0.35
SNRPD1-203ENST00000579618 TRIOBPQ9H2D6 2365 aa12.85□□□□□ -0.35
SNRPD1-203ENST00000579618 C20orf194Q5TEA3 1177 aa12.84□□□□□ -0.35
SNRPD1-203ENST00000579618 STRIP1Q5VSL9 837 aa12.84□□□□□ -0.35
SNRPD1-203ENST00000579618 TXNRD3Q86VQ6 643 aa12.84□□□□□ -0.35
SNRPD1-203ENST00000579618 CCDC191Q8NCU4 936 aa12.84□□□□□ -0.35
SNRPD1-203ENST00000579618 SH3TC2Q8TF17 1288 aa12.84□□□□□ -0.35
SNRPD1-203ENST00000579618 COG6Q9Y2V7 657 aa12.84□□□□□ -0.35
SNRPD1-203ENST00000579618 MYH3P11055 1940 aa12.84□□□□□ -0.35
SNRPD1-203ENST00000579618 PDE8AO60658 829 aa12.83□□□□□ -0.36
SNRPD1-203ENST00000579618 KLRK1P26718 216 aa12.83□□□□□ -0.36
SNRPD1-203ENST00000579618 OTUD7BQ6GQQ9 843 aa12.83□□□□□ -0.36
SNRPD1-203ENST00000579618 NBPF11Q86T75 865 aa12.83□□□□□ -0.36
SNRPD1-203ENST00000579618 SHISA4Q96DD7 197 aa12.83□□□□□ -0.36
SNRPD1-203ENST00000579618 MYD88Q99836 296 aa12.83□□□□□ -0.36
SNRPD1-203ENST00000579618 TNNQ9UQP3 1299 aa12.83□□□□□ -0.36
SNRPD1-203ENST00000579618 AOX1Q06278 1338 aa12.83□□□□□ -0.36
SNRPD1-203ENST00000579618 TESPA1A2RU30 521 aaPredicted RBP12.82□□□□□ -0.36
SNRPD1-203ENST00000579618 NEURL1BA8MQ27 555 aa12.82□□□□□ -0.36
SNRPD1-203ENST00000579618 GNAI3P08754 354 aa12.82□□□□□ -0.36
SNRPD1-203ENST00000579618 CRBNQ96SW2 442 aa12.82□□□□□ -0.36
SNRPD1-203ENST00000579618 COA1Q9GZY4 146 aa12.82□□□□□ -0.36
SNRPD1-203ENST00000579618 PRO3102Q9H379 93 aa12.82□□□□□ -0.36
SNRPD1-203ENST00000579618 CWC25Q9NXE8 425 aaPredicted RBP12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms