RNA–Protein interactions for RNA: ENST00000579605.5

CDK5RAP3-213, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 560 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-213ENST00000579605 MS4A4AQ96JQ5 239 aa17.11■□□□□ 0.33
CDK5RAP3-213ENST00000579605 BSDC1Q9NW68 430 aaPredicted RBP17.11■□□□□ 0.33
CDK5RAP3-213ENST00000579605 PPP2R3BQ9Y5P8 575 aa17.11■□□□□ 0.33
CDK5RAP3-213ENST00000579605 PSME4Q14997 1843 aa17.1■□□□□ 0.33
CDK5RAP3-213ENST00000579605 CHL1O00533 1208 aa17.1■□□□□ 0.33
CDK5RAP3-213ENST00000579605 FAM43AQ8N2R8 423 aa17.1■□□□□ 0.33
CDK5RAP3-213ENST00000579605 HTATIP2Q9BUP3 242 aa17.1■□□□□ 0.33
CDK5RAP3-213ENST00000579605 PRO3102Q9H379 93 aa17.1■□□□□ 0.33
CDK5RAP3-213ENST00000579605 PHAXQ9H814 394 aaKnown RBP17.1■□□□□ 0.33
CDK5RAP3-213ENST00000579605 CWC25Q9NXE8 425 aaPredicted RBP17.1■□□□□ 0.33
CDK5RAP3-213ENST00000579605 NR2E3Q9Y5X4 410 aa17.1■□□□□ 0.33
CDK5RAP3-213ENST00000579605 COL1A1P02452 1464 aaPredicted RBP17.1■□□□□ 0.33
CDK5RAP3-213ENST00000579605 MYO1BO43795 1136 aa17.09■□□□□ 0.33
CDK5RAP3-213ENST00000579605 TMPOP42166 694 aaKnown RBP17.09■□□□□ 0.33
CDK5RAP3-213ENST00000579605 LMOD3Q0VAK6 560 aa17.09■□□□□ 0.33
CDK5RAP3-213ENST00000579605 RASA3Q14644 834 aa17.09■□□□□ 0.33
CDK5RAP3-213ENST00000579605 CFAP100Q494V2 611 aa17.09■□□□□ 0.33
CDK5RAP3-213ENST00000579605 CCDC191Q8NCU4 936 aa17.09■□□□□ 0.33
CDK5RAP3-213ENST00000579605 PRMT6Q96LA8 375 aaPredicted RBP17.09■□□□□ 0.33
CDK5RAP3-213ENST00000579605 LEMD3Q9Y2U8 911 aa17.09■□□□□ 0.33
CDK5RAP3-213ENST00000579605 RANBP2P49792 3224 aaKnown RBP17.08■□□□□ 0.33
CDK5RAP3-213ENST00000579605 ZNF804BA4D1E1 1349 aa17.08■□□□□ 0.32
CDK5RAP3-213ENST00000579605 RBM5P52756 815 aaKnown RBP eCLIP17.08■□□□□ 0.32
CDK5RAP3-213ENST00000579605 CTSWP56202 376 aa17.08■□□□□ 0.32
CDK5RAP3-213ENST00000579605 GREM2Q9H772 168 aa17.08■□□□□ 0.32
CDK5RAP3-213ENST00000579605 COL6A3P12111 3177 aa17.07■□□□□ 0.32
CDK5RAP3-213ENST00000579605 AOX1Q06278 1338 aa17.07■□□□□ 0.32
CDK5RAP3-213ENST00000579605 WDHD1O75717 1129 aaPredicted RBP17.07■□□□□ 0.32
CDK5RAP3-213ENST00000579605 GTF2A2P52657 109 aa17.07■□□□□ 0.32
CDK5RAP3-213ENST00000579605 DUSP27Q5VZP5 1158 aa17.07■□□□□ 0.32
CDK5RAP3-213ENST00000579605 CERS5Q8N5B7 392 aa17.07■□□□□ 0.32
CDK5RAP3-213ENST00000579605 TTLL11Q8NHH1 800 aa17.07■□□□□ 0.32
CDK5RAP3-213ENST00000579605 SPDYE2BA6NHP3 402 aa17.06■□□□□ 0.32
CDK5RAP3-213ENST00000579605 ZBTB7BO15156 539 aaPredicted RBP17.06■□□□□ 0.32
CDK5RAP3-213ENST00000579605 SPDYE6P0CI01 402 aa17.06■□□□□ 0.32
CDK5RAP3-213ENST00000579605 KCNJ4P48050 445 aa17.06■□□□□ 0.32
CDK5RAP3-213ENST00000579605 LACTBP83111 547 aaPredicted RBP17.06■□□□□ 0.32
CDK5RAP3-213ENST00000579605 MTMR14Q8NCE2 650 aa17.06■□□□□ 0.32
CDK5RAP3-213ENST00000579605 NKX2-3Q8TAU0 364 aa17.06■□□□□ 0.32
CDK5RAP3-213ENST00000579605 BIN2Q9UBW5 565 aaPredicted RBP17.06■□□□□ 0.32
CDK5RAP3-213ENST00000579605 STAP2Q9UGK3 403 aa17.06■□□□□ 0.32
CDK5RAP3-213ENST00000579605 HOXB7P09629 217 aa17.05■□□□□ 0.32
CDK5RAP3-213ENST00000579605 CD209Q9NNX6 404 aa17.05■□□□□ 0.32
CDK5RAP3-213ENST00000579605 JAG2Q9Y219 1238 aa17.05■□□□□ 0.32
CDK5RAP3-213ENST00000579605 TLR2O60603 784 aa17.04■□□□□ 0.32
CDK5RAP3-213ENST00000579605 CCL5P13501 91 aa17.04■□□□□ 0.32
CDK5RAP3-213ENST00000579605 IGHMBP2P38935 993 aaKnown RBP17.04■□□□□ 0.32
CDK5RAP3-213ENST00000579605 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.04■□□□□ 0.32
CDK5RAP3-213ENST00000579605 RAET1EQ8TD07 263 aa17.04■□□□□ 0.32
CDK5RAP3-213ENST00000579605 RNF208Q9H0X6 261 aa17.04■□□□□ 0.32
CDK5RAP3-213ENST00000579605 SNAP23O00161 211 aa17.03■□□□□ 0.32
CDK5RAP3-213ENST00000579605 GRK4P32298 578 aa17.03■□□□□ 0.32
CDK5RAP3-213ENST00000579605 GJA8P48165 433 aa17.03■□□□□ 0.32
CDK5RAP3-213ENST00000579605 MAP3K9P80192 1104 aa17.03■□□□□ 0.32
CDK5RAP3-213ENST00000579605 VGLL4Q14135 290 aa17.03■□□□□ 0.32
CDK5RAP3-213ENST00000579605 CDAN1Q8IWY9 1227 aa17.03■□□□□ 0.32
CDK5RAP3-213ENST00000579605 ANKRD2Q9GZV1 360 aa17.03■□□□□ 0.32
CDK5RAP3-213ENST00000579605 A0A1W2PPC1 479 aa17.02■□□□□ 0.32
CDK5RAP3-213ENST00000579605 ELL2O00472 640 aaPredicted RBP17.02■□□□□ 0.32
CDK5RAP3-213ENST00000579605 EVI5O60447 810 aa17.02■□□□□ 0.32
CDK5RAP3-213ENST00000579605 GNRH1P01148 92 aa17.02■□□□□ 0.32
CDK5RAP3-213ENST00000579605 GJB1P08034 283 aa17.02■□□□□ 0.32
CDK5RAP3-213ENST00000579605 PSMC4P43686 418 aa17.02■□□□□ 0.32
CDK5RAP3-213ENST00000579605 PRMT2P55345 433 aa17.02■□□□□ 0.32
CDK5RAP3-213ENST00000579605 UBE2Q1Q7Z7E8 422 aa17.02■□□□□ 0.32
CDK5RAP3-213ENST00000579605 CCDC146Q8IYE0 955 aa17.02■□□□□ 0.32
CDK5RAP3-213ENST00000579605 DEFB123Q8N688 67 aa17.02■□□□□ 0.32
CDK5RAP3-213ENST00000579605 METTL22Q9BUU2 404 aaPredicted RBP17.02■□□□□ 0.32
CDK5RAP3-213ENST00000579605 CSADQ9Y600 493 aa17.02■□□□□ 0.32
CDK5RAP3-213ENST00000579605 BTBD19C9JJ37 291 aa17.01■□□□□ 0.31
CDK5RAP3-213ENST00000579605 FARP2O94887 1054 aaPredicted RBP17.01■□□□□ 0.31
CDK5RAP3-213ENST00000579605 FMNL1O95466 1100 aaPredicted RBP17.01■□□□□ 0.31
CDK5RAP3-213ENST00000579605 CTGFP29279 349 aa17.01■□□□□ 0.31
CDK5RAP3-213ENST00000579605 Q7L0L9 218 aa17.01■□□□□ 0.31
CDK5RAP3-213ENST00000579605 MPHOSPH8Q99549 860 aa17.01■□□□□ 0.31
CDK5RAP3-213ENST00000579605 SRRDQ9UH36 339 aa17.01■□□□□ 0.31
CDK5RAP3-213ENST00000579605 CPA4Q9UI42 421 aa17.01■□□□□ 0.31
CDK5RAP3-213ENST00000579605 RIPOR2Q9Y4F9 1068 aa17.01■□□□□ 0.31
CDK5RAP3-213ENST00000579605 TCP10L2B9ZVM9 353 aa17■□□□□ 0.31
CDK5RAP3-213ENST00000579605 CETPP11597 493 aa17■□□□□ 0.31
CDK5RAP3-213ENST00000579605 OSBPP22059 807 aa17■□□□□ 0.31
CDK5RAP3-213ENST00000579605 TRIM47Q96LD4 638 aa17■□□□□ 0.31
CDK5RAP3-213ENST00000579605 COL25A1Q9BXS0 654 aaPredicted RBP17■□□□□ 0.31
CDK5RAP3-213ENST00000579605 TDRD3Q9H7E2 651 aaKnown RBP17■□□□□ 0.31
CDK5RAP3-213ENST00000579605 ZNF70Q9UC06 446 aaPredicted RBP17■□□□□ 0.31
CDK5RAP3-213ENST00000579605 HOXD10P28358 340 aa16.99■□□□□ 0.31
CDK5RAP3-213ENST00000579605 CHRNDQ07001 517 aa16.99■□□□□ 0.31
CDK5RAP3-213ENST00000579605 HELBQ8NG08 1087 aaPredicted RBP16.99■□□□□ 0.31
CDK5RAP3-213ENST00000579605 U2AF1L4Q8WU68 220 aaKnown RBP16.99■□□□□ 0.31
CDK5RAP3-213ENST00000579605 TMEM39BQ9GZU3 492 aa16.99■□□□□ 0.31
CDK5RAP3-213ENST00000579605 TRIM35Q9UPQ4 493 aa16.99■□□□□ 0.31
CDK5RAP3-213ENST00000579605 MAP3K2Q9Y2U5 619 aa16.99■□□□□ 0.31
CDK5RAP3-213ENST00000579605 CUL9Q8IWT3 2517 aa16.99■□□□□ 0.31
CDK5RAP3-213ENST00000579605 ZNF646O15015 1829 aaPredicted RBP16.98■□□□□ 0.31
CDK5RAP3-213ENST00000579605 TAF5LO75529 589 aa16.98■□□□□ 0.31
CDK5RAP3-213ENST00000579605 DDX58O95786 925 aaKnown RBP16.98■□□□□ 0.31
CDK5RAP3-213ENST00000579605 ITGA6P23229 1130 aa16.98■□□□□ 0.31
CDK5RAP3-213ENST00000579605 UBXN2AP68543 259 aa16.98■□□□□ 0.31
CDK5RAP3-213ENST00000579605 TNFAIP1Q13829 316 aa16.98■□□□□ 0.31
CDK5RAP3-213ENST00000579605 ZSWIM8A7E2V4 1837 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms