RNA–Protein interactions for RNA: ENST00000578917.1

TRAF4-213, Transcript of TNF receptor associated factor 4, humanhuman

TSL 4

Gene TRAF4, Length 484 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-213ENST00000578917 GGA3Q9NZ52 723 aa8.12□□□□□ -1.11
TRAF4-213ENST00000578917 PGAP2Q9UHJ9 254 aa8.12□□□□□ -1.11
TRAF4-213ENST00000578917 AKAP2Q9Y2D5 859 aa8.12□□□□□ -1.11
TRAF4-213ENST00000578917 CCDC88AQ3V6T2 1871 aa8.12□□□□□ -1.11
TRAF4-213ENST00000578917 COL4A1P02462 1669 aa8.11□□□□□ -1.11
TRAF4-213ENST00000578917 PASKQ96RG2 1323 aa8.11□□□□□ -1.11
TRAF4-213ENST00000578917 ZBTB7BO15156 539 aaPredicted RBP8.11□□□□□ -1.11
TRAF4-213ENST00000578917 RLBP1P12271 317 aa8.11□□□□□ -1.11
TRAF4-213ENST00000578917 FMR1Q06787 632 aaKnown RBP eCLIP8.11□□□□□ -1.11
TRAF4-213ENST00000578917 TFCP2Q12800 502 aa8.11□□□□□ -1.11
TRAF4-213ENST00000578917 NBPF9Q3BBW0 867 aa8.11□□□□□ -1.11
TRAF4-213ENST00000578917 ATG9AQ7Z3C6 839 aa8.11□□□□□ -1.11
TRAF4-213ENST00000578917 FBXO33Q7Z6M2 555 aa8.11□□□□□ -1.11
TRAF4-213ENST00000578917 C2orf69Q8N8R5 385 aa8.11□□□□□ -1.11
TRAF4-213ENST00000578917 TDRD7Q8NHU6 1098 aaKnown RBP8.11□□□□□ -1.11
TRAF4-213ENST00000578917 BCL11AQ9H165 835 aa8.11□□□□□ -1.11
TRAF4-213ENST00000578917 C1orf115Q9H7X2 142 aa8.11□□□□□ -1.11
TRAF4-213ENST00000578917 COPRSQ9NQ92 184 aa8.11□□□□□ -1.11
TRAF4-213ENST00000578917 LAMB2P55268 1798 aa8.11□□□□□ -1.11
TRAF4-213ENST00000578917 DUOX1Q9NRD9 1551 aa8.1□□□□□ -1.11
TRAF4-213ENST00000578917 ADM5C9JUS6 153 aa8.1□□□□□ -1.11
TRAF4-213ENST00000578917 SURF6O75683 361 aaKnown RBP8.1□□□□□ -1.11
TRAF4-213ENST00000578917 NF2P35240 595 aa8.1□□□□□ -1.11
TRAF4-213ENST00000578917 TIMM10P62072 90 aa8.1□□□□□ -1.11
TRAF4-213ENST00000578917 ATP8B2P98198 1209 aa8.1□□□□□ -1.11
TRAF4-213ENST00000578917 MTX1Q13505 466 aa8.1□□□□□ -1.11
TRAF4-213ENST00000578917 TTLL12Q14166 644 aaPredicted RBP8.1□□□□□ -1.11
TRAF4-213ENST00000578917 TBC1D22AQ8WUA7 517 aa8.1□□□□□ -1.11
TRAF4-213ENST00000578917 DDX19BQ9UMR2 479 aa8.1□□□□□ -1.11
TRAF4-213ENST00000578917 TTF2Q9UNY4 1162 aaKnown RBP8.1□□□□□ -1.11
TRAF4-213ENST00000578917 COG6Q9Y2V7 657 aa8.1□□□□□ -1.11
TRAF4-213ENST00000578917 DICER1Q9UPY3 1922 aaKnown RBP8.09□□□□□ -1.11
TRAF4-213ENST00000578917 ASTN2O75129 1339 aaPredicted RBP8.09□□□□□ -1.11
TRAF4-213ENST00000578917 PNMA6EA0A0J9YXQ4 647 aa8.09□□□□□ -1.11
TRAF4-213ENST00000578917 WNT10BO00744 389 aa8.09□□□□□ -1.11
TRAF4-213ENST00000578917 FKBP1AP62942 108 aaKnown RBP8.09□□□□□ -1.11
TRAF4-213ENST00000578917 CFAP100Q494V2 611 aa8.09□□□□□ -1.11
TRAF4-213ENST00000578917 CST9Q5W186 159 aa8.09□□□□□ -1.11
TRAF4-213ENST00000578917 DLK2Q6UY11 383 aa8.09□□□□□ -1.11
TRAF4-213ENST00000578917 CERS5Q8N5B7 392 aa8.09□□□□□ -1.11
TRAF4-213ENST00000578917 VGLL2Q8N8G2 317 aa8.09□□□□□ -1.11
TRAF4-213ENST00000578917 WDR66Q8TBY9 1149 aa8.09□□□□□ -1.11
TRAF4-213ENST00000578917 VEZTQ9HBM0 779 aa8.09□□□□□ -1.11
TRAF4-213ENST00000578917 SCAF8Q9UPN6 1271 aaKnown RBP8.09□□□□□ -1.11
TRAF4-213ENST00000578917 FAM205AQ6ZU69 1335 aa8.08□□□□□ -1.12
TRAF4-213ENST00000578917 IRS2Q9Y4H2 1338 aa8.08□□□□□ -1.12
TRAF4-213ENST00000578917 A0A1B0GUL7 405 aa8.08□□□□□ -1.12
TRAF4-213ENST00000578917 APBB1O00213 710 aa8.08□□□□□ -1.12
TRAF4-213ENST00000578917 HMMRO75330 724 aa8.08□□□□□ -1.12
TRAF4-213ENST00000578917 FGFR2P21802 821 aa8.08□□□□□ -1.12
TRAF4-213ENST00000578917 ECE1P42892 770 aa8.08□□□□□ -1.12
TRAF4-213ENST00000578917 VEGFBP49765 207 aa8.08□□□□□ -1.12
TRAF4-213ENST00000578917 HUNKP57058 714 aa8.08□□□□□ -1.12
TRAF4-213ENST00000578917 MVPQ14764 893 aaKnown RBP8.08□□□□□ -1.12
TRAF4-213ENST00000578917 PRAMEF18Q5VWM3 479 aa8.08□□□□□ -1.12
TRAF4-213ENST00000578917 APOBEC3FQ8IUX4 373 aaKnown RBP8.08□□□□□ -1.12
TRAF4-213ENST00000578917 TEKT1Q969V4 418 aa8.08□□□□□ -1.12
TRAF4-213ENST00000578917 AIDAQ96BJ3 306 aa8.08□□□□□ -1.12
TRAF4-213ENST00000578917 CDCA5Q96FF9 252 aa8.08□□□□□ -1.12
TRAF4-213ENST00000578917 BEGAINQ9BUH8 593 aa8.08□□□□□ -1.12
TRAF4-213ENST00000578917 GBA2Q9HCG7 927 aaPredicted RBP8.08□□□□□ -1.12
TRAF4-213ENST00000578917 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.08□□□□□ -1.12
TRAF4-213ENST00000578917 SERPINA10Q9UK55 444 aa8.08□□□□□ -1.12
TRAF4-213ENST00000578917 DENND2AQ9ULE3 1009 aa8.08□□□□□ -1.12
TRAF4-213ENST00000578917 LRRC37AA6NMS7 1700 aa8.08□□□□□ -1.12
TRAF4-213ENST00000578917 SCN4AP35499 1836 aa8.08□□□□□ -1.12
TRAF4-213ENST00000578917 CLRN2A0PK11 232 aa8.07□□□□□ -1.12
TRAF4-213ENST00000578917 SPDYE2BA6NHP3 402 aa8.07□□□□□ -1.12
TRAF4-213ENST00000578917 SEMA3EO15041 775 aa8.07□□□□□ -1.12
TRAF4-213ENST00000578917 LDHBP07195 334 aaKnown RBP8.07□□□□□ -1.12
TRAF4-213ENST00000578917 SPDYE6P0CI01 402 aa8.07□□□□□ -1.12
TRAF4-213ENST00000578917 ADORA1P30542 326 aa8.07□□□□□ -1.12
TRAF4-213ENST00000578917 PHKA1P46020 1223 aa8.07□□□□□ -1.12
TRAF4-213ENST00000578917 CRKP46108 304 aa8.07□□□□□ -1.12
TRAF4-213ENST00000578917 PRKG1Q13976 671 aa8.07□□□□□ -1.12
TRAF4-213ENST00000578917 PDE3AQ14432 1141 aa8.07□□□□□ -1.12
TRAF4-213ENST00000578917 HSP90AB4PQ58FF6 505 aa8.07□□□□□ -1.12
TRAF4-213ENST00000578917 CCDC158Q5M9N0 1113 aa8.07□□□□□ -1.12
TRAF4-213ENST00000578917 CCDC102BQ68D86 513 aa8.07□□□□□ -1.12
TRAF4-213ENST00000578917 CYP4F22Q6NT55 531 aa8.07□□□□□ -1.12
TRAF4-213ENST00000578917 SSH3Q8TE77 659 aa8.07□□□□□ -1.12
TRAF4-213ENST00000578917 XAGE2Q96GT9 111 aa8.07□□□□□ -1.12
TRAF4-213ENST00000578917 CAPNS2Q96L46 248 aa8.07□□□□□ -1.12
TRAF4-213ENST00000578917 PRMT6Q96LA8 375 aaPredicted RBP8.07□□□□□ -1.12
TRAF4-213ENST00000578917 DEFB129Q9H1M3 183 aa8.07□□□□□ -1.12
TRAF4-213ENST00000578917 TMOD2Q9NZR1 351 aa8.07□□□□□ -1.12
TRAF4-213ENST00000578917 ABCF2Q9UG63 623 aa8.07□□□□□ -1.12
TRAF4-213ENST00000578917 TLL2Q9Y6L7 1015 aa8.07□□□□□ -1.12
TRAF4-213ENST00000578917 MAST3O60307 1309 aa8.06□□□□□ -1.12
TRAF4-213ENST00000578917 PITPNM2Q9BZ72 1349 aa8.06□□□□□ -1.12
TRAF4-213ENST00000578917 WDR33Q9C0J8 1336 aaKnown RBP8.06□□□□□ -1.12
TRAF4-213ENST00000578917 RASSF10A6NK89 507 aa8.06□□□□□ -1.12
TRAF4-213ENST00000578917 TNNI2P48788 182 aa8.06□□□□□ -1.12
TRAF4-213ENST00000578917 ZNF157P51786 506 aaPredicted RBP8.06□□□□□ -1.12
TRAF4-213ENST00000578917 TNFAIP1Q13829 316 aa8.06□□□□□ -1.12
TRAF4-213ENST00000578917 POLA2Q14181 598 aa8.06□□□□□ -1.12
TRAF4-213ENST00000578917 SUPT20HL1Q3ZLR7 823 aa8.06□□□□□ -1.12
TRAF4-213ENST00000578917 TTC39AQ5SRH9 613 aa8.06□□□□□ -1.12
TRAF4-213ENST00000578917 SPTY2D1Q68D10 685 aaPredicted RBP8.06□□□□□ -1.12
TRAF4-213ENST00000578917 CEP85Q6P2H3 762 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 1731.7 ms