RNA–Protein interactions for RNA: ENST00000578904.1

CSNK1D-209, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 1,269 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-209ENST00000578904 FAM84BQ96KN1 310 aaPredicted RBP16.91■□□□□ 0.3
CSNK1D-209ENST00000578904 UPF2Q9HAU5 1272 aaKnown RBP16.91■□□□□ 0.3
CSNK1D-209ENST00000578904 TLR7Q9NYK1 1049 aaKnown RBP16.91■□□□□ 0.3
CSNK1D-209ENST00000578904 HIP1O00291 1037 aa16.9■□□□□ 0.3
CSNK1D-209ENST00000578904 GSPT1P15170 499 aaKnown RBP16.9■□□□□ 0.3
CSNK1D-209ENST00000578904 SDSP20132 328 aa16.9■□□□□ 0.3
CSNK1D-209ENST00000578904 BCAMP50895 628 aa16.9■□□□□ 0.3
CSNK1D-209ENST00000578904 FBXO33Q7Z6M2 555 aa16.9■□□□□ 0.3
CSNK1D-209ENST00000578904 ZNF512BQ96KM6 892 aaPredicted RBP16.9■□□□□ 0.3
CSNK1D-209ENST00000578904 BACH2Q9BYV9 841 aa16.9■□□□□ 0.3
CSNK1D-209ENST00000578904 CD209Q9NNX6 404 aa16.9■□□□□ 0.3
CSNK1D-209ENST00000578904 ZNRF3Q9ULT6 936 aa16.9■□□□□ 0.3
CSNK1D-209ENST00000578904 FRAT2O75474 233 aaPredicted RBP16.89■□□□□ 0.29
CSNK1D-209ENST00000578904 PHKA1P46020 1223 aa16.89■□□□□ 0.29
CSNK1D-209ENST00000578904 EIF6P56537 245 aaKnown RBP16.89■□□□□ 0.29
CSNK1D-209ENST00000578904 CCDC102BQ68D86 513 aa16.89■□□□□ 0.29
CSNK1D-209ENST00000578904 PODNQ7Z5L7 613 aa16.89■□□□□ 0.29
CSNK1D-209ENST00000578904 BOLA2Q9H3K6 86 aa16.89■□□□□ 0.29
CSNK1D-209ENST00000578904 MYH13Q9UKX3 1938 aa16.89■□□□□ 0.29
CSNK1D-209ENST00000578904 YDJCA8MPS7 323 aa16.88■□□□□ 0.29
CSNK1D-209ENST00000578904 IL1R1P14778 569 aa16.88■□□□□ 0.29
CSNK1D-209ENST00000578904 TSHZ3Q63HK5 1081 aa16.88■□□□□ 0.29
CSNK1D-209ENST00000578904 FBXW7Q969H0 707 aa16.88■□□□□ 0.29
CSNK1D-209ENST00000578904 HAUS7Q99871 368 aa16.88■□□□□ 0.29
CSNK1D-209ENST00000578904 IQSEC3Q9UPP2 1182 aaPredicted RBP16.88■□□□□ 0.29
CSNK1D-209ENST00000578904 CEP350Q5VT06 3117 aa16.88■□□□□ 0.29
CSNK1D-209ENST00000578904 ZC3H4Q9UPT8 1303 aaKnown RBP16.88■□□□□ 0.29
CSNK1D-209ENST00000578904 FZD9O00144 591 aa16.87■□□□□ 0.29
CSNK1D-209ENST00000578904 RAD17O75943 681 aa16.87■□□□□ 0.29
CSNK1D-209ENST00000578904 TTF1Q15361 905 aaPredicted RBP16.87■□□□□ 0.29
CSNK1D-209ENST00000578904 C8orf34Q49A92 452 aa16.87■□□□□ 0.29
CSNK1D-209ENST00000578904 RUFY2Q8WXA3 655 aa16.87■□□□□ 0.29
CSNK1D-209ENST00000578904 ZNF541Q9H0D2 1346 aa16.87■□□□□ 0.29
CSNK1D-209ENST00000578904 TDRD7Q8NHU6 1098 aaKnown RBP16.86■□□□□ 0.29
CSNK1D-209ENST00000578904 MYH7P12883 1935 aa16.86■□□□□ 0.29
CSNK1D-209ENST00000578904 SCN9AQ15858 1988 aa16.86■□□□□ 0.29
CSNK1D-209ENST00000578904 SEMA3EO15041 775 aa16.85■□□□□ 0.29
CSNK1D-209ENST00000578904 ARID4AP29374 1257 aaPredicted RBP16.85■□□□□ 0.29
CSNK1D-209ENST00000578904 GTF2IP78347 998 aa16.85■□□□□ 0.29
CSNK1D-209ENST00000578904 CHAF1AQ13111 956 aaPredicted RBP16.85■□□□□ 0.29
CSNK1D-209ENST00000578904 CIAPIN1Q6FI81 312 aa16.85■□□□□ 0.29
CSNK1D-209ENST00000578904 DNAJC2Q99543 621 aaKnown RBP16.85■□□□□ 0.29
CSNK1D-209ENST00000578904 JAG2Q9Y219 1238 aa16.85■□□□□ 0.29
CSNK1D-209ENST00000578904 COL1A1P02452 1464 aaPredicted RBP16.85■□□□□ 0.29
CSNK1D-209ENST00000578904 PSME4Q14997 1843 aa16.84■□□□□ 0.29
CSNK1D-209ENST00000578904 AKAP11Q9UKA4 1901 aa16.84■□□□□ 0.29
CSNK1D-209ENST00000578904 USP17L3A6NCW0 530 aa16.84■□□□□ 0.29
CSNK1D-209ENST00000578904 USP17L4A6NCW7 530 aa16.84■□□□□ 0.29
CSNK1D-209ENST00000578904 CXCL9Q07325 125 aa16.84■□□□□ 0.29
CSNK1D-209ENST00000578904 RASGRF1Q13972 1273 aa16.84■□□□□ 0.29
CSNK1D-209ENST00000578904 TNIP1Q15025 636 aa16.84■□□□□ 0.29
CSNK1D-209ENST00000578904 USP17L1Q7RTZ2 530 aa16.84■□□□□ 0.29
CSNK1D-209ENST00000578904 FSD1Q9BTV5 496 aa16.84■□□□□ 0.29
CSNK1D-209ENST00000578904 KCNQ5Q9NR82 932 aa16.84■□□□□ 0.29
CSNK1D-209ENST00000578904 DIAPH3Q9NSV4 1193 aa16.84■□□□□ 0.29
CSNK1D-209ENST00000578904 PAG1Q9NWQ8 432 aa16.84■□□□□ 0.29
CSNK1D-209ENST00000578904 DENND2AQ9ULE3 1009 aa16.84■□□□□ 0.29
CSNK1D-209ENST00000578904 GJA3Q9Y6H8 435 aa16.84■□□□□ 0.29
CSNK1D-209ENST00000578904 RFX7Q2KHR2 1363 aa16.84■□□□□ 0.29
CSNK1D-209ENST00000578904 PSMD14O00487 310 aa16.83■□□□□ 0.28
CSNK1D-209ENST00000578904 ZBTB22O15209 634 aa16.83■□□□□ 0.28
CSNK1D-209ENST00000578904 REC8O95072 547 aa16.83■□□□□ 0.28
CSNK1D-209ENST00000578904 STRIP1Q5VSL9 837 aa16.83■□□□□ 0.28
CSNK1D-209ENST00000578904 TTLL5Q6EMB2 1281 aa16.83■□□□□ 0.28
CSNK1D-209ENST00000578904 ZSCAN25Q6NSZ9 544 aa16.83■□□□□ 0.28
CSNK1D-209ENST00000578904 TBC1D9Q6ZT07 1266 aa16.83■□□□□ 0.28
CSNK1D-209ENST00000578904 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.83■□□□□ 0.285e-10■□□□□ 9.7
CSNK1D-209ENST00000578904 FAM205AQ6ZU69 1335 aa16.82■□□□□ 0.28
CSNK1D-209ENST00000578904 MAP4K4O95819 1239 aaPredicted RBP16.82■□□□□ 0.28
CSNK1D-209ENST00000578904 MCAMP43121 646 aa16.82■□□□□ 0.28
CSNK1D-209ENST00000578904 SCARF1Q14162 830 aa16.82■□□□□ 0.28
CSNK1D-209ENST00000578904 DPY19L2Q6NUT2 758 aa16.82■□□□□ 0.28
CSNK1D-209ENST00000578904 GPC2Q8N158 579 aa16.82■□□□□ 0.28
CSNK1D-209ENST00000578904 ZNF646O15015 1829 aaPredicted RBP16.82■□□□□ 0.28
CSNK1D-209ENST00000578904 PDS5AQ29RF7 1337 aaKnown RBP16.81■□□□□ 0.28
CSNK1D-209ENST00000578904 IGSF3O75054 1194 aa16.81■□□□□ 0.28
CSNK1D-209ENST00000578904 ZFYP08048 801 aaPredicted RBP16.81■□□□□ 0.28
CSNK1D-209ENST00000578904 VIL1P09327 827 aaKnown RBP16.81■□□□□ 0.28
CSNK1D-209ENST00000578904 DACT2Q5SW24 774 aa16.81■□□□□ 0.28
CSNK1D-209ENST00000578904 RSBN1LQ6PCB5 846 aaPredicted RBP16.81■□□□□ 0.28
CSNK1D-209ENST00000578904 PI16Q6UXB8 463 aa16.81■□□□□ 0.28
CSNK1D-209ENST00000578904 KBTBD3Q8NAB2 608 aa16.81■□□□□ 0.28
CSNK1D-209ENST00000578904 SPATA5Q8NB90 893 aa16.81■□□□□ 0.28
CSNK1D-209ENST00000578904 WDR66Q8TBY9 1149 aa16.81■□□□□ 0.28
CSNK1D-209ENST00000578904 TBC1D22AQ8WUA7 517 aa16.81■□□□□ 0.28
CSNK1D-209ENST00000578904 HMG20BQ9P0W2 317 aa16.81■□□□□ 0.28
CSNK1D-209ENST00000578904 MYO3BQ8WXR4 1341 aa16.8■□□□□ 0.28
CSNK1D-209ENST00000578904 GLTPD2A6NH11 291 aa16.8■□□□□ 0.28
CSNK1D-209ENST00000578904 GOLIM4O00461 696 aa16.8■□□□□ 0.28
CSNK1D-209ENST00000578904 DDNO94850 711 aaPredicted RBP16.8■□□□□ 0.28
CSNK1D-209ENST00000578904 HSPA6P17066 643 aa16.8■□□□□ 0.28
CSNK1D-209ENST00000578904 CHMLP26374 656 aa16.8■□□□□ 0.28
CSNK1D-209ENST00000578904 MFSD14BQ5SR56 506 aa16.8■□□□□ 0.28
CSNK1D-209ENST00000578904 MXD3Q9BW11 206 aa16.8■□□□□ 0.28
CSNK1D-209ENST00000578904 SNRKQ9NRH2 765 aa16.8■□□□□ 0.28
CSNK1D-209ENST00000578904 ZAP70P43403 619 aa16.79■□□□□ 0.28
CSNK1D-209ENST00000578904 MFAP1P55081 439 aaKnown RBP16.79■□□□□ 0.28
CSNK1D-209ENST00000578904 FKBP1AP62942 108 aaKnown RBP16.79■□□□□ 0.28
CSNK1D-209ENST00000578904 TMED8Q6PL24 325 aaPredicted RBP16.79■□□□□ 0.28
CSNK1D-209ENST00000578904 KIAA1211Q6ZU35 1233 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms