RNA–Protein interactions for RNA: ENST00000578733.5

CDK5RAP3-210, Transcript of CDK5 regulatory subunit associated protein 3, human

TSL 2

Gene CDK5RAP3, Length 578 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK5RAP3-210	ENST00000578733	MYO5A	Q9Y4I1	1855 aa	Known RBP	13.76	□□□□□ -0.21
CDK5RAP3-210	ENST00000578733	ZNF646	O15015	1829 aa	Predicted RBP	13.76	□□□□□ -0.21
CDK5RAP3-210	ENST00000578733	MAST2	Q6P0Q8	1798 aa		13.76	□□□□□ -0.21
CDK5RAP3-210	ENST00000578733	IRS2	Q9Y4H2	1338 aa		13.76	□□□□□ -0.21
CDK5RAP3-210	ENST00000578733	ZBTB22	O15209	634 aa		13.76	□□□□□ -0.21
CDK5RAP3-210	ENST00000578733	CAPN15	O75808	1086 aa		13.76	□□□□□ -0.21
CDK5RAP3-210	ENST00000578733	IL1R1	P14778	569 aa		13.76	□□□□□ -0.21
CDK5RAP3-210	ENST00000578733	KLRK1	P26718	216 aa		13.76	□□□□□ -0.21
CDK5RAP3-210	ENST00000578733	ADORA1	P30542	326 aa		13.76	□□□□□ -0.21
CDK5RAP3-210	ENST00000578733	BCAM	P50895	628 aa		13.76	□□□□□ -0.21
CDK5RAP3-210	ENST00000578733	DOK7	Q18PE1	504 aa		13.76	□□□□□ -0.21
CDK5RAP3-210	ENST00000578733	TXNRD3	Q86VQ6	643 aa		13.76	□□□□□ -0.21
CDK5RAP3-210	ENST00000578733	DBNDD1	Q9H9R9	158 aa		13.76	□□□□□ -0.21
CDK5RAP3-210	ENST00000578733	CD209	Q9NNX6	404 aa		13.76	□□□□□ -0.21
CDK5RAP3-210	ENST00000578733	ZNRF3	Q9ULT6	936 aa		13.76	□□□□□ -0.21
CDK5RAP3-210	ENST00000578733	ARID4A	P29374	1257 aa	Predicted RBP	13.75	□□□□□ -0.21
CDK5RAP3-210	ENST00000578733	ZGPAT	Q8N5A5	531 aa	Known RBP	13.75	□□□□□ -0.21
CDK5RAP3-210	ENST00000578733	SMC1B	Q8NDV3	1235 aa		13.75	□□□□□ -0.21
CDK5RAP3-210	ENST00000578733	TBC1D22A	Q8WUA7	517 aa		13.75	□□□□□ -0.21
CDK5RAP3-210	ENST00000578733	TLR7	Q9NYK1	1049 aa	Known RBP	13.75	□□□□□ -0.21
CDK5RAP3-210	ENST00000578733	TNFRSF11A	Q9Y6Q6	616 aa	Predicted RBP	13.75	□□□□□ -0.21
CDK5RAP3-210	ENST00000578733	AOX1	Q06278	1338 aa		13.74	□□□□□ -0.21
CDK5RAP3-210	ENST00000578733	PDS5A	Q29RF7	1337 aa	Known RBP	13.74	□□□□□ -0.21
CDK5RAP3-210	ENST00000578733	WTIP	A6NIX2	430 aa	Predicted RBP	13.74	□□□□□ -0.21
CDK5RAP3-210	ENST00000578733	GLRX3	O76003	335 aa	Known RBP	13.74	□□□□□ -0.21
CDK5RAP3-210	ENST00000578733	ATP5J	P18859	108 aa		13.74	□□□□□ -0.21
CDK5RAP3-210	ENST00000578733	PHKA1	P46020	1223 aa		13.74	□□□□□ -0.21
CDK5RAP3-210	ENST00000578733	TNIP1	Q15025	636 aa		13.74	□□□□□ -0.21
CDK5RAP3-210	ENST00000578733	TDRD7	Q8NHU6	1098 aa	Known RBP	13.74	□□□□□ -0.21
CDK5RAP3-210	ENST00000578733	FBXW7	Q969H0	707 aa		13.74	□□□□□ -0.21
CDK5RAP3-210	ENST00000578733	MYH2	Q9UKX2	1941 aa		13.74	□□□□□ -0.21
CDK5RAP3-210	ENST00000578733	MYO3B	Q8WXR4	1341 aa		13.73	□□□□□ -0.21
CDK5RAP3-210	ENST00000578733	HTRA3	P83110	453 aa		13.73	□□□□□ -0.21
CDK5RAP3-210	ENST00000578733	STRIP1	Q5VSL9	837 aa		13.73	□□□□□ -0.21
CDK5RAP3-210	ENST00000578733	CIAPIN1	Q6FI81	312 aa		13.73	□□□□□ -0.21
CDK5RAP3-210	ENST00000578733	SPATA5	Q8NB90	893 aa		13.73	□□□□□ -0.21
CDK5RAP3-210	ENST00000578733	WDR66	Q8TBY9	1149 aa		13.73	□□□□□ -0.21
CDK5RAP3-210	ENST00000578733	SCN4A	P35499	1836 aa		13.73	□□□□□ -0.21
CDK5RAP3-210	ENST00000578733	FAM205A	Q6ZU69	1335 aa		13.72	□□□□□ -0.21
CDK5RAP3-210	ENST00000578733	USP17L3	A6NCW0	530 aa		13.72	□□□□□ -0.21
CDK5RAP3-210	ENST00000578733	USP17L4	A6NCW7	530 aa		13.72	□□□□□ -0.21
CDK5RAP3-210	ENST00000578733	IGSF3	O75054	1194 aa		13.72	□□□□□ -0.21
CDK5RAP3-210	ENST00000578733	PDE1A	P54750	535 aa		13.72	□□□□□ -0.21
CDK5RAP3-210	ENST00000578733	CHAF1A	Q13111	956 aa	Predicted RBP	13.72	□□□□□ -0.21
CDK5RAP3-210	ENST00000578733	TTF1	Q15361	905 aa	Predicted RBP	13.72	□□□□□ -0.21
CDK5RAP3-210	ENST00000578733	SPTY2D1	Q68D10	685 aa	Predicted RBP	13.72	□□□□□ -0.21
CDK5RAP3-210	ENST00000578733	TTLL5	Q6EMB2	1281 aa		13.72	□□□□□ -0.21
CDK5RAP3-210	ENST00000578733	DPY19L2	Q6NUT2	758 aa		13.72	□□□□□ -0.21
CDK5RAP3-210	ENST00000578733	USP17L1	Q7RTZ2	530 aa		13.72	□□□□□ -0.21
CDK5RAP3-210	ENST00000578733	OSBPL3	Q9H4L5	887 aa		13.72	□□□□□ -0.21
CDK5RAP3-210	ENST00000578733	RRAGC	Q9HB90	399 aa		13.72	□□□□□ -0.21
CDK5RAP3-210	ENST00000578733	STAP2	Q9UGK3	403 aa		13.72	□□□□□ -0.21
CDK5RAP3-210	ENST00000578733	IQSEC3	Q9UPP2	1182 aa	Predicted RBP	13.72	□□□□□ -0.21
CDK5RAP3-210	ENST00000578733	COL4A5	P29400	1685 aa		13.72	□□□□□ -0.21
CDK5RAP3-210	ENST00000578733	ECM29	Q5VYK3	1845 aa		13.71	□□□□□ -0.21
CDK5RAP3-210	ENST00000578733	FZD9	O00144	591 aa		13.71	□□□□□ -0.21
CDK5RAP3-210	ENST00000578733	FKBP1A	P62942	108 aa	Known RBP	13.71	□□□□□ -0.21
CDK5RAP3-210	ENST00000578733	GTF2I	P78347	998 aa		13.71	□□□□□ -0.21
CDK5RAP3-210	ENST00000578733	RASGRF1	Q13972	1273 aa		13.71	□□□□□ -0.21
CDK5RAP3-210	ENST00000578733	LRRFIP1	Q32MZ4	808 aa	Known RBP	13.71	□□□□□ -0.21
CDK5RAP3-210	ENST00000578733	PLEKHM2	Q8IWE5	1019 aa		13.71	□□□□□ -0.21
CDK5RAP3-210	ENST00000578733	DNAJC2	Q99543	621 aa	Known RBP	13.71	□□□□□ -0.21
CDK5RAP3-210	ENST00000578733	MAST3	O60307	1309 aa		13.7	□□□□□ -0.22
CDK5RAP3-210	ENST00000578733	SALL3	Q9BXA9	1300 aa		13.7	□□□□□ -0.22
CDK5RAP3-210	ENST00000578733	SALL1	Q9NSC2	1324 aa		13.7	□□□□□ -0.22
CDK5RAP3-210	ENST00000578733	MCAM	P43121	646 aa		13.7	□□□□□ -0.22
CDK5RAP3-210	ENST00000578733	MMP14	P50281	582 aa		13.7	□□□□□ -0.22
CDK5RAP3-210	ENST00000578733	HAUS7	Q99871	368 aa		13.7	□□□□□ -0.22
CDK5RAP3-210	ENST00000578733	BOLA2	Q9H3K6	86 aa		13.7	□□□□□ -0.22
CDK5RAP3-210	ENST00000578733	HMG20B	Q9P0W2	317 aa		13.7	□□□□□ -0.22
CDK5RAP3-210	ENST00000578733	SUGT1	Q9Y2Z0	365 aa		13.7	□□□□□ -0.22
CDK5RAP3-210	ENST00000578733	YDJC	A8MPS7	323 aa		13.69	□□□□□ -0.22
CDK5RAP3-210	ENST00000578733	RAD17	O75943	681 aa		13.69	□□□□□ -0.22
CDK5RAP3-210	ENST00000578733	RPS12	P25398	132 aa	Known RBP	13.69	□□□□□ -0.22
CDK5RAP3-210	ENST00000578733	RGS3	P49796	1198 aa		13.69	□□□□□ -0.22
CDK5RAP3-210	ENST00000578733	MFSD14B	Q5SR56	506 aa		13.69	□□□□□ -0.22
CDK5RAP3-210	ENST00000578733	RSBN1L	Q6PCB5	846 aa	Predicted RBP	13.69	□□□□□ -0.22
CDK5RAP3-210	ENST00000578733	CNTROB	Q8N137	903 aa		13.69	□□□□□ -0.22
CDK5RAP3-210	ENST00000578733	GPC2	Q8N158	579 aa		13.69	□□□□□ -0.22
CDK5RAP3-210	ENST00000578733	AGBL3	Q8NEM8	1001 aa		13.69	□□□□□ -0.22
CDK5RAP3-210	ENST00000578733	OTUD7A	Q8TE49	926 aa	Predicted RBP	13.69	□□□□□ -0.22
CDK5RAP3-210	ENST00000578733	PAG1	Q9NWQ8	432 aa		13.69	□□□□□ -0.22
CDK5RAP3-210	ENST00000578733	ABCF2	Q9UG63	623 aa		13.69	□□□□□ -0.22
CDK5RAP3-210	ENST00000578733	GJA3	Q9Y6H8	435 aa		13.69	□□□□□ -0.22
CDK5RAP3-210	ENST00000578733	COL1A1	P02452	1464 aa	Predicted RBP	13.68	□□□□□ -0.22
CDK5RAP3-210	ENST00000578733	PSMD14	O00487	310 aa		13.68	□□□□□ -0.22
CDK5RAP3-210	ENST00000578733	HSPA1A	P0DMV8	641 aa	Known RBP	13.68	□□□□□ -0.22
CDK5RAP3-210	ENST00000578733	HSPA1B	P0DMV9	641 aa	Known RBP	13.68	□□□□□ -0.22
CDK5RAP3-210	ENST00000578733	PDE4A	P27815	886 aa		13.68	□□□□□ -0.22
CDK5RAP3-210	ENST00000578733	ZAP70	P43403	619 aa		13.68	□□□□□ -0.22
CDK5RAP3-210	ENST00000578733	CXCL9	Q07325	125 aa		13.68	□□□□□ -0.22
CDK5RAP3-210	ENST00000578733	ZSCAN25	Q6NSZ9	544 aa		13.68	□□□□□ -0.22
CDK5RAP3-210	ENST00000578733	TMED8	Q6PL24	325 aa	Predicted RBP	13.68	□□□□□ -0.22
CDK5RAP3-210	ENST00000578733	ERICH6	Q7L0X2	663 aa		13.68	□□□□□ -0.22
CDK5RAP3-210	ENST00000578733	SLF2	Q8IX21	1173 aa		13.68	□□□□□ -0.22
CDK5RAP3-210	ENST00000578733	PI4K2B	Q8TCG2	481 aa		13.68	□□□□□ -0.22
CDK5RAP3-210	ENST00000578733	DDX24	Q9GZR7	859 aa	Known RBP eCLIP	13.68	□□□□□ -0.22	5e-15	■■□□□ 13.7
CDK5RAP3-210	ENST00000578733	SNRK	Q9NRH2	765 aa		13.68	□□□□□ -0.22
CDK5RAP3-210	ENST00000578733	LRP2BP	Q9P2M1	347 aa		13.68	□□□□□ -0.22
CDK5RAP3-210	ENST00000578733	HDAC9	Q9UKV0	1011 aa		13.68	□□□□□ -0.22

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