RNA–Protein interactions for RNA: ENST00000578600.1

PTPRM-208, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 2

Gene PTPRM, Length 578 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-208ENST00000578600 C9orf131Q5VYM1 1079 aa8.23□□□□□ -1.09
PTPRM-208ENST00000578600 NXPE4Q6UWF7 544 aa8.23□□□□□ -1.09
PTPRM-208ENST00000578600 CEP120Q8N960 986 aa8.23□□□□□ -1.09
PTPRM-208ENST00000578600 TRPM4Q8TD43 1214 aa8.23□□□□□ -1.09
PTPRM-208ENST00000578600 RNF34Q969K3 372 aa8.23□□□□□ -1.09
PTPRM-208ENST00000578600 SRCIN1Q9C0H9 1055 aa8.23□□□□□ -1.09
PTPRM-208ENST00000578600 ARHGEF12Q9NZN5 1544 aa8.23□□□□□ -1.09
PTPRM-208ENST00000578600 ZNF518AQ6AHZ1 1483 aa8.22□□□□□ -1.09
PTPRM-208ENST00000578600 GADD45BO75293 160 aaPredicted RBP8.22□□□□□ -1.09
PTPRM-208ENST00000578600 HYAL2Q12891 473 aa8.22□□□□□ -1.09
PTPRM-208ENST00000578600 NEUROD1Q13562 356 aa8.22□□□□□ -1.09
PTPRM-208ENST00000578600 SYT9Q86SS6 491 aa8.22□□□□□ -1.09
PTPRM-208ENST00000578600 NPAS3Q8IXF0 933 aa8.22□□□□□ -1.09
PTPRM-208ENST00000578600 GPR161Q8N6U8 529 aaKnown RBP8.22□□□□□ -1.09
PTPRM-208ENST00000578600 CRELD1Q96HD1 420 aa8.22□□□□□ -1.09
PTPRM-208ENST00000578600 CNTNAP3BQ96NU0 1288 aa8.22□□□□□ -1.09
PTPRM-208ENST00000578600 CNTNAP3Q9BZ76 1288 aa8.22□□□□□ -1.09
PTPRM-208ENST00000578600 METTL5Q9NRN9 209 aaKnown RBP8.22□□□□□ -1.09
PTPRM-208ENST00000578600 H3BM21 787 aa8.21□□□□□ -1.1
PTPRM-208ENST00000578600 ZNF76P36508 570 aa8.21□□□□□ -1.1
PTPRM-208ENST00000578600 GPLD1P80108 840 aa8.21□□□□□ -1.1
PTPRM-208ENST00000578600 NAALADL2Q58DX5 795 aa8.21□□□□□ -1.1
PTPRM-208ENST00000578600 SREK1Q8WXA9 508 aaKnown RBP8.21□□□□□ -1.1
PTPRM-208ENST00000578600 AVENQ9NQS1 362 aaPredicted RBP8.21□□□□□ -1.1
PTPRM-208ENST00000578600 FAM8A1Q9UBU6 413 aa8.21□□□□□ -1.1
PTPRM-208ENST00000578600 KLF15Q9UIH9 416 aa8.21□□□□□ -1.1
PTPRM-208ENST00000578600 PRR12Q9ULL5 1215 aa8.21□□□□□ -1.1
PTPRM-208ENST00000578600 FRMPD1Q5SYB0 1578 aa8.21□□□□□ -1.1
PTPRM-208ENST00000578600 USP31Q70CQ4 1352 aa8.21□□□□□ -1.1
PTPRM-208ENST00000578600 PREX1Q8TCU6 1659 aa8.21□□□□□ -1.1
PTPRM-208ENST00000578600 NPATQ14207 1427 aa8.2□□□□□ -1.1
PTPRM-208ENST00000578600 LOC105371045A0A1W2PR82 267 aa8.2□□□□□ -1.1
PTPRM-208ENST00000578600 SIN3BO75182 1162 aa8.2□□□□□ -1.1
PTPRM-208ENST00000578600 BMP4P12644 408 aa8.2□□□□□ -1.1
PTPRM-208ENST00000578600 ACPPP15309 386 aa8.2□□□□□ -1.1
PTPRM-208ENST00000578600 FANCCQ00597 558 aa8.2□□□□□ -1.1
PTPRM-208ENST00000578600 PRPF40BQ6NWY9 871 aaKnown RBP8.2□□□□□ -1.1
PTPRM-208ENST00000578600 METTL16Q86W50 562 aaKnown RBP8.2□□□□□ -1.1
PTPRM-208ENST00000578600 NT5DC4Q86YG4 428 aa8.2□□□□□ -1.1
PTPRM-208ENST00000578600 TCF12Q99081 682 aa8.2□□□□□ -1.1
PTPRM-208ENST00000578600 MDFIQ99750 246 aa8.2□□□□□ -1.1
PTPRM-208ENST00000578600 ZKSCAN3Q9BRR0 538 aa8.2□□□□□ -1.1
PTPRM-208ENST00000578600 RAPGEF6Q8TEU7 1601 aa8.2□□□□□ -1.1
PTPRM-208ENST00000578600 CTTNBP2Q8WZ74 1663 aa8.2□□□□□ -1.1
PTPRM-208ENST00000578600 NUP153P49790 1475 aaKnown RBP8.19□□□□□ -1.1
PTPRM-208ENST00000578600 LOC102724428A0A0B4J2F2 783 aa8.19□□□□□ -1.1
PTPRM-208ENST00000578600 NFKBIEO00221 500 aa8.19□□□□□ -1.1
PTPRM-208ENST00000578600 USP17L7P0C7H9 530 aa8.19□□□□□ -1.1
PTPRM-208ENST00000578600 VSIG8P0DPA2 414 aa8.19□□□□□ -1.1
PTPRM-208ENST00000578600 MX2P20592 715 aa8.19□□□□□ -1.1
PTPRM-208ENST00000578600 SIK1P57059 783 aa8.19□□□□□ -1.1
PTPRM-208ENST00000578600 NCAPG2Q86XI2 1143 aa8.19□□□□□ -1.1
PTPRM-208ENST00000578600 C3orf58Q8NDZ4 430 aa8.19□□□□□ -1.1
PTPRM-208ENST00000578600 TNFRSF25Q93038 417 aa8.19□□□□□ -1.1
PTPRM-208ENST00000578600 DRC1Q96MC2 740 aa8.19□□□□□ -1.1
PTPRM-208ENST00000578600 NSUN5Q96P11 429 aaKnown RBP8.19□□□□□ -1.1
PTPRM-208ENST00000578600 EHD4Q9H223 541 aa8.19□□□□□ -1.1
PTPRM-208ENST00000578600 CCSER2Q9H7U1 834 aa8.19□□□□□ -1.1
PTPRM-208ENST00000578600 DZANK1Q9NVP4 752 aa8.19□□□□□ -1.1
PTPRM-208ENST00000578600 DNAJB12Q9NXW2 375 aaKnown RBP8.19□□□□□ -1.1
PTPRM-208ENST00000578600 NCOA1Q15788 1441 aa8.19□□□□□ -1.1
PTPRM-208ENST00000578600 SF3A1Q15459 793 aaKnown RBP8.18□□□□□ -1.1
PTPRM-208ENST00000578600 CCNJLQ8IV13 435 aa8.18□□□□□ -1.1
PTPRM-208ENST00000578600 OSMRQ99650 979 aa8.18□□□□□ -1.1
PTPRM-208ENST00000578600 LIN7BQ9HAP6 207 aa8.18□□□□□ -1.1
PTPRM-208ENST00000578600 TRAK1Q9UPV9 953 aa8.18□□□□□ -1.1
PTPRM-208ENST00000578600 J3QW42 95 aa8.17□□□□□ -1.1
PTPRM-208ENST00000578600 ARAFP10398 606 aa8.17□□□□□ -1.1
PTPRM-208ENST00000578600 PCBP4P57723 403 aaKnown RBP8.17□□□□□ -1.1
PTPRM-208ENST00000578600 MLLT1Q03111 559 aaPredicted RBP8.17□□□□□ -1.1
PTPRM-208ENST00000578600 ABCB6Q9NP58 842 aa8.17□□□□□ -1.1
PTPRM-208ENST00000578600 MBIPQ9NS73 344 aa8.17□□□□□ -1.1
PTPRM-208ENST00000578600 CLIP1P30622 1438 aa8.17□□□□□ -1.1
PTPRM-208ENST00000578600 EEA1Q15075 1411 aa8.17□□□□□ -1.1
PTPRM-208ENST00000578600 AGLP35573 1532 aa8.17□□□□□ -1.1
PTPRM-208ENST00000578600 HECW1Q76N89 1606 aa8.17□□□□□ -1.1
PTPRM-208ENST00000578600 RICTORQ6R327 1708 aa8.17□□□□□ -1.1
PTPRM-208ENST00000578600 TMEM238LA0A1B0GVL6 79 aa8.16□□□□□ -1.1
PTPRM-208ENST00000578600 ADARB2-AS1A8MUL3 147 aa8.16□□□□□ -1.1
PTPRM-208ENST00000578600 TRPA1O75762 1119 aa8.16□□□□□ -1.1
PTPRM-208ENST00000578600 GSTT1P30711 240 aa8.16□□□□□ -1.1
PTPRM-208ENST00000578600 ST13P50502 369 aaKnown RBP8.16□□□□□ -1.1
PTPRM-208ENST00000578600 RAD51AP2Q09MP3 1159 aa8.16□□□□□ -1.1
PTPRM-208ENST00000578600 PTPRKQ15262 1439 aa8.16□□□□□ -1.1
PTPRM-208ENST00000578600 TAF1CQ15572 869 aaPredicted RBP8.16□□□□□ -1.1
PTPRM-208ENST00000578600 PCSK7Q16549 785 aa8.16□□□□□ -1.1
PTPRM-208ENST00000578600 MEI1Q5TIA1 1274 aa8.16□□□□□ -1.1
PTPRM-208ENST00000578600 HFE2Q6ZVN8 426 aa8.16□□□□□ -1.1
PTPRM-208ENST00000578600 LTBP4Q8N2S1 1624 aa8.16□□□□□ -1.1
PTPRM-208ENST00000578600 AFAP1Q8N556 730 aa8.16□□□□□ -1.1
PTPRM-208ENST00000578600 TMEM102Q8N9M5 508 aaPredicted RBP8.16□□□□□ -1.1
PTPRM-208ENST00000578600 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP8.16□□□□□ -1.1
PTPRM-208ENST00000578600 ANKRD24Q8TF21 1146 aa8.16□□□□□ -1.1
PTPRM-208ENST00000578600 NXPE3Q969Y0 559 aa8.16□□□□□ -1.1
PTPRM-208ENST00000578600 UBE2OQ9C0C9 1292 aaKnown RBP8.16□□□□□ -1.1
PTPRM-208ENST00000578600 BHLHE41Q9C0J9 482 aaPredicted RBP8.16□□□□□ -1.1
PTPRM-208ENST00000578600 PPP4R2Q9NY27 417 aa8.16□□□□□ -1.1
PTPRM-208ENST00000578600 PPP1R1BQ9UD71 204 aaPredicted RBP8.16□□□□□ -1.1
PTPRM-208ENST00000578600 MLH3Q9UHC1 1453 aa8.16□□□□□ -1.1
PTPRM-208ENST00000578600 FER1L4A9Z1Z3 1794 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms