RNA–Protein interactions for RNA: ENST00000577001.1

PRPF8-216, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 5

Gene PRPF8, Length 3,274 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-216ENST00000577001 KCNJ14Q9UNX9 436 aa17.27■□□□□ 0.36
PRPF8-216ENST00000577001 LRP10Q7Z4F1 713 aa17.27■□□□□ 0.36
PRPF8-216ENST00000577001 GPAA1O43292 621 aa17.27■□□□□ 0.35
PRPF8-216ENST00000577001 ZCRB1Q8TBF4 217 aaKnown RBP17.27■□□□□ 0.35
PRPF8-216ENST00000577001 KCNB2Q92953 911 aa17.27■□□□□ 0.35
PRPF8-216ENST00000577001 CHMP4AQ9BY43 222 aa17.27■□□□□ 0.35
PRPF8-216ENST00000577001 ZNF215Q9UL58 517 aaPredicted RBP17.27■□□□□ 0.35
PRPF8-216ENST00000577001 PRKAB2O43741 272 aa17.26■□□□□ 0.35
PRPF8-216ENST00000577001 PFKFB2O60825 505 aa17.26■□□□□ 0.35
PRPF8-216ENST00000577001 CASP1P29466 404 aa17.26■□□□□ 0.35
PRPF8-216ENST00000577001 SNW1Q13573 536 aaKnown RBP17.26■□□□□ 0.35
PRPF8-216ENST00000577001 CEP135Q66GS9 1140 aa17.26■□□□□ 0.35
PRPF8-216ENST00000577001 HOMER1Q86YM7 354 aa17.26■□□□□ 0.35
PRPF8-216ENST00000577001 STAMQ92783 540 aa17.26■□□□□ 0.35
PRPF8-216ENST00000577001 XPO4Q9C0E2 1151 aaKnown RBP17.26■□□□□ 0.35
PRPF8-216ENST00000577001 TOPAZ1Q8N9V7 1692 aa17.26■□□□□ 0.35
PRPF8-216ENST00000577001 PNOCQ13519 176 aa17.26■□□□□ 0.35
PRPF8-216ENST00000577001 TRERF1Q96PN7 1200 aa17.26■□□□□ 0.35
PRPF8-216ENST00000577001 DNAJC5Q9H3Z4 198 aa17.26■□□□□ 0.35
PRPF8-216ENST00000577001 ZSWIM4Q9H7M6 989 aa17.26■□□□□ 0.35
PRPF8-216ENST00000577001 ZNF213O14771 459 aa17.25■□□□□ 0.35
PRPF8-216ENST00000577001 HMGN5P82970 282 aaKnown RBP17.25■□□□□ 0.35
PRPF8-216ENST00000577001 CCDC94Q9BW85 323 aaPredicted RBP17.25■□□□□ 0.35
PRPF8-216ENST00000577001 IQCB1Q15051 598 aa17.25■□□□□ 0.35
PRPF8-216ENST00000577001 TRMT44Q8IYL2 757 aaKnown RBP17.25■□□□□ 0.35
PRPF8-216ENST00000577001 CCAR2Q8N163 923 aaKnown RBP17.25■□□□□ 0.35
PRPF8-216ENST00000577001 ZMYM1Q5SVZ6 1142 aa17.25■□□□□ 0.35
PRPF8-216ENST00000577001 ACSBG1Q96GR2 724 aa17.25■□□□□ 0.35
PRPF8-216ENST00000577001 C19orf44Q9H6X5 657 aa17.25■□□□□ 0.35
PRPF8-216ENST00000577001 BAZ2BQ9UIF8 2168 aaKnown RBP17.25■□□□□ 0.35
PRPF8-216ENST00000577001 LTN1O94822 1766 aa17.25■□□□□ 0.35
PRPF8-216ENST00000577001 PHKA1P46020 1223 aa17.24■□□□□ 0.35
PRPF8-216ENST00000577001 NCBP1Q09161 790 aaKnown RBP17.24■□□□□ 0.35
PRPF8-216ENST00000577001 IFIT5Q13325 482 aaKnown RBP17.24■□□□□ 0.35
PRPF8-216ENST00000577001 ELF2Q15723 593 aa17.24■□□□□ 0.35
PRPF8-216ENST00000577001 IMMTQ16891 758 aaKnown RBP17.24■□□□□ 0.35
PRPF8-216ENST00000577001 SYT10Q6XYQ8 523 aa17.24■□□□□ 0.35
PRPF8-216ENST00000577001 GPIHBP1Q8IV16 184 aa17.24■□□□□ 0.35
PRPF8-216ENST00000577001 LRRC8AQ8IWT6 810 aa17.24■□□□□ 0.35
PRPF8-216ENST00000577001 WWC3Q9ULE0 1092 aa17.24■□□□□ 0.35
PRPF8-216ENST00000577001 ERICH4A6NGS2 130 aa17.24■□□□□ 0.35
PRPF8-216ENST00000577001 CASP7P55210 303 aa17.24■□□□□ 0.35
PRPF8-216ENST00000577001 PTPN14Q15678 1187 aa17.24■□□□□ 0.35
PRPF8-216ENST00000577001 STX1AQ16623 288 aa17.24■□□□□ 0.35
PRPF8-216ENST00000577001 DHX40Q8IX18 779 aaKnown RBP17.24■□□□□ 0.35
PRPF8-216ENST00000577001 DPF2Q92785 391 aa17.24■□□□□ 0.35
PRPF8-216ENST00000577001 ADAMTSL3P82987 1691 aa17.24■□□□□ 0.35
PRPF8-216ENST00000577001 PRDM1O75626 825 aa17.23■□□□□ 0.35
PRPF8-216ENST00000577001 WDHD1O75717 1129 aaPredicted RBP17.23■□□□□ 0.35
PRPF8-216ENST00000577001 CYB5R4Q7L1T6 521 aa17.23■□□□□ 0.35
PRPF8-216ENST00000577001 PRIMPOLQ96LW4 560 aa17.23■□□□□ 0.35
PRPF8-216ENST00000577001 SPTLC3Q9NUV7 552 aa17.23■□□□□ 0.35
PRPF8-216ENST00000577001 CARMIL3Q8ND23 1372 aa17.23■□□□□ 0.35
PRPF8-216ENST00000577001 PXDNLA1KZ92 1463 aa17.23■□□□□ 0.35
PRPF8-216ENST00000577001 ANTXR2P58335 489 aa17.23■□□□□ 0.35
PRPF8-216ENST00000577001 GRIN1Q05586 938 aa17.23■□□□□ 0.35
PRPF8-216ENST00000577001 KLHL10Q6JEL2 608 aa17.23■□□□□ 0.35
PRPF8-216ENST00000577001 PLA2G4DQ86XP0 818 aa17.23■□□□□ 0.35
PRPF8-216ENST00000577001 CPLX3Q8WVH0 158 aa17.23■□□□□ 0.35
PRPF8-216ENST00000577001 SLC26A6Q9BXS9 759 aa17.23■□□□□ 0.35
PRPF8-216ENST00000577001 TRMT112Q9UI30 125 aaKnown RBP17.23■□□□□ 0.35
PRPF8-216ENST00000577001 NALCNQ8IZF0 1738 aa17.23■□□□□ 0.35
PRPF8-216ENST00000577001 SPTLC2O15270 562 aa17.23■□□□□ 0.35
PRPF8-216ENST00000577001 IL15P40933 162 aaPredicted RBP17.23■□□□□ 0.35
PRPF8-216ENST00000577001 MCAMP43121 646 aa17.23■□□□□ 0.35
PRPF8-216ENST00000577001 MRPS27Q92552 414 aaKnown RBP17.23■□□□□ 0.35
PRPF8-216ENST00000577001 ALG1Q9BT22 464 aa17.23■□□□□ 0.35
PRPF8-216ENST00000577001 MINDY4BA8MYZ0 360 aa17.22■□□□□ 0.35
PRPF8-216ENST00000577001 FOXP2O15409 715 aa17.22■□□□□ 0.35
PRPF8-216ENST00000577001 ITGA6P23229 1130 aa17.22■□□□□ 0.35
PRPF8-216ENST00000577001 CDC27P30260 824 aa17.22■□□□□ 0.35
PRPF8-216ENST00000577001 USPL1Q5W0Q7 1092 aa17.22■□□□□ 0.35
PRPF8-216ENST00000577001 BICDL1Q6ZP65 573 aa17.22■□□□□ 0.35
PRPF8-216ENST00000577001 TBC1D10CQ8IV04 446 aa17.22■□□□□ 0.35
PRPF8-216ENST00000577001 ZNF396Q96N95 335 aaPredicted RBP17.22■□□□□ 0.35
PRPF8-216ENST00000577001 ARMT1Q9H993 441 aa17.22■□□□□ 0.35
PRPF8-216ENST00000577001 ABCF2Q9UG63 623 aa17.22■□□□□ 0.35
PRPF8-216ENST00000577001 PALLDQ8WX93 1383 aa17.22■□□□□ 0.35
PRPF8-216ENST00000577001 H7C1W4 665 aa17.22■□□□□ 0.35
PRPF8-216ENST00000577001 ZNF202O95125 648 aa17.22■□□□□ 0.35
PRPF8-216ENST00000577001 SLC3A2P08195 630 aaKnown RBP17.22■□□□□ 0.35
PRPF8-216ENST00000577001 GUCY1A2P33402 732 aa17.22■□□□□ 0.35
PRPF8-216ENST00000577001 CEP57L1Q8IYX8 460 aa17.22■□□□□ 0.35
PRPF8-216ENST00000577001 IL17RAQ96F46 866 aa17.22■□□□□ 0.35
PRPF8-216ENST00000577001 PIH1D3Q9NQM4 214 aaKnown RBP17.22■□□□□ 0.35
PRPF8-216ENST00000577001 UTYO14607 1347 aa17.22■□□□□ 0.35
PRPF8-216ENST00000577001 TMEM232C9JQI7 657 aa17.22■□□□□ 0.35
PRPF8-216ENST00000577001 EXOSC10Q01780 885 aaKnown RBP17.22■□□□□ 0.35
PRPF8-216ENST00000577001 FAM160A1Q05DH4 1040 aa17.22■□□□□ 0.35
PRPF8-216ENST00000577001 TDRD7Q8NHU6 1098 aaKnown RBP17.22■□□□□ 0.35
PRPF8-216ENST00000577001 SERPINC1P01008 464 aa17.21■□□□□ 0.35
PRPF8-216ENST00000577001 SEC31BQ9NQW1 1179 aa17.21■□□□□ 0.35
PRPF8-216ENST00000577001 STX17P56962 302 aa17.21■□□□□ 0.35
PRPF8-216ENST00000577001 TRDNQ13061 729 aa17.21■□□□□ 0.35
PRPF8-216ENST00000577001 CFAP100Q494V2 611 aa17.21■□□□□ 0.35
PRPF8-216ENST00000577001 ANKARQ7Z5J8 1434 aa17.21■□□□□ 0.35
PRPF8-216ENST00000577001 ZSCAN16Q9H4T2 348 aaPredicted RBP17.21■□□□□ 0.35
PRPF8-216ENST00000577001 TMEM94Q12767 1356 aa17.21■□□□□ 0.34
PRPF8-216ENST00000577001 ZNF771Q7L3S4 317 aaPredicted RBP17.2■□□□□ 0.34
PRPF8-216ENST00000577001 RCOR1Q9UKL0 485 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms