RNA–Protein interactions for RNA: ENST00000576148.1

RAB40B-210, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40B, Length 343 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-210ENST00000576148 RTF1Q92541 710 aaKnown RBP9.65□□□□□ -0.86
RAB40B-210ENST00000576148 ZCCHC17Q9NP64 241 aaKnown RBP9.65□□□□□ -0.86
RAB40B-210ENST00000576148 CTGFP29279 349 aa9.64□□□□□ -0.87
RAB40B-210ENST00000576148 RPS8P62241 208 aaKnown RBP9.64□□□□□ -0.87
RAB40B-210ENST00000576148 HSP90AB3PQ58FF7 597 aa9.64□□□□□ -0.87
RAB40B-210ENST00000576148 DIS3LQ8TF46 1054 aaKnown RBP9.64□□□□□ -0.87
RAB40B-210ENST00000576148 FBXW7Q969H0 707 aa9.64□□□□□ -0.87
RAB40B-210ENST00000576148 MXD3Q9BW11 206 aa9.64□□□□□ -0.87
RAB40B-210ENST00000576148 CRISPLD2Q9H0B8 497 aa9.64□□□□□ -0.87
RAB40B-210ENST00000576148 PANK3Q9H999 370 aa9.64□□□□□ -0.87
RAB40B-210ENST00000576148 LRRC37AA6NMS7 1700 aa9.64□□□□□ -0.87
RAB40B-210ENST00000576148 CETPP11597 493 aa9.63□□□□□ -0.87
RAB40B-210ENST00000576148 PRKCZQ05513 592 aa9.63□□□□□ -0.87
RAB40B-210ENST00000576148 SF3B3Q15393 1217 aaKnown RBP9.63□□□□□ -0.87
RAB40B-210ENST00000576148 DACT2Q5SW24 774 aa9.63□□□□□ -0.87
RAB40B-210ENST00000576148 NBPF12Q5TAG4 269 aaPredicted RBP9.63□□□□□ -0.87
RAB40B-210ENST00000576148 C17orf99Q6UX52 265 aa9.63□□□□□ -0.87
RAB40B-210ENST00000576148 ANKLE1Q8NAG6 615 aa9.63□□□□□ -0.87
RAB40B-210ENST00000576148 NBPF3Q9H094 633 aa9.63□□□□□ -0.87
RAB40B-210ENST00000576148 LAMA2P24043 3122 aaKnown RBP9.63□□□□□ -0.87
RAB40B-210ENST00000576148 U2SURPO15042 1029 aaKnown RBP9.62□□□□□ -0.87
RAB40B-210ENST00000576148 ADCY3O60266 1144 aa9.62□□□□□ -0.87
RAB40B-210ENST00000576148 INHAP05111 366 aa9.62□□□□□ -0.87
RAB40B-210ENST00000576148 MDM2Q00987 491 aaPredicted RBP9.62□□□□□ -0.87
RAB40B-210ENST00000576148 DLGAP5Q15398 846 aa9.62□□□□□ -0.87
RAB40B-210ENST00000576148 TAF7Q15545 349 aaPredicted RBP9.62□□□□□ -0.87
RAB40B-210ENST00000576148 STRIP1Q5VSL9 837 aa9.62□□□□□ -0.87
RAB40B-210ENST00000576148 MCM10Q7L590 875 aa9.62□□□□□ -0.87
RAB40B-210ENST00000576148 ADAMTS19Q8TE59 1207 aa9.62□□□□□ -0.87
RAB40B-210ENST00000576148 ZBED3Q96IU2 234 aaPredicted RBP9.62□□□□□ -0.87
RAB40B-210ENST00000576148 UHRF1Q96T88 793 aaPredicted RBP9.62□□□□□ -0.87
RAB40B-210ENST00000576148 P2RX7Q99572 595 aaKnown RBP9.62□□□□□ -0.87
RAB40B-210ENST00000576148 PAK6Q9NQU5 681 aaPredicted RBP9.62□□□□□ -0.87
RAB40B-210ENST00000576148 CPA4Q9UI42 421 aa9.62□□□□□ -0.87
RAB40B-210ENST00000576148 LAMB1P07942 1786 aa9.62□□□□□ -0.87
RAB40B-210ENST00000576148 ANKRD36CQ5JPF3 1778 aa9.62□□□□□ -0.87
RAB40B-210ENST00000576148 SSC5DA1L4H1 1573 aa9.62□□□□□ -0.87
RAB40B-210ENST00000576148 ADGRA2Q96PE1 1338 aa9.61□□□□□ -0.87
RAB40B-210ENST00000576148 BTBD19C9JJ37 291 aa9.61□□□□□ -0.87
RAB40B-210ENST00000576148 MYO1BO43795 1136 aa9.61□□□□□ -0.87
RAB40B-210ENST00000576148 FCGRTP55899 365 aa9.61□□□□□ -0.87
RAB40B-210ENST00000576148 KIAA0825Q8IV33 1275 aa9.61□□□□□ -0.87
RAB40B-210ENST00000576148 ATXN2LQ8WWM7 1075 aaKnown RBP9.61□□□□□ -0.87
RAB40B-210ENST00000576148 MIS18AQ9NYP9 233 aa9.61□□□□□ -0.87
RAB40B-210ENST00000576148 ZNF804BA4D1E1 1349 aa9.6□□□□□ -0.87
RAB40B-210ENST00000576148 IL27Q8NEV9 243 aa9.6□□□□□ -0.87
RAB40B-210ENST00000576148 LBHD1Q9BQE6 289 aaPredicted RBP9.6□□□□□ -0.87
RAB40B-210ENST00000576148 C11orf49Q9H6J7 331 aa9.6□□□□□ -0.87
RAB40B-210ENST00000576148 CSADQ9Y600 493 aa9.6□□□□□ -0.87
RAB40B-210ENST00000576148 COL2A1P02458 1487 aaPredicted RBP9.59□□□□□ -0.87
RAB40B-210ENST00000576148 ZSWIM8A7E2V4 1837 aa9.59□□□□□ -0.87
RAB40B-210ENST00000576148 ELNP15502 786 aa9.59□□□□□ -0.87
RAB40B-210ENST00000576148 ATP2B4P23634 1241 aa9.59□□□□□ -0.87
RAB40B-210ENST00000576148 MAP3K9P80192 1104 aa9.59□□□□□ -0.87
RAB40B-210ENST00000576148 SNAPC2Q13487 334 aa9.59□□□□□ -0.87
RAB40B-210ENST00000576148 VGLL4Q14135 290 aa9.59□□□□□ -0.87
RAB40B-210ENST00000576148 PPP1R3FQ6ZSY5 799 aaPredicted RBP9.59□□□□□ -0.87
RAB40B-210ENST00000576148 PXYLP1Q8TE99 480 aa9.59□□□□□ -0.87
RAB40B-210ENST00000576148 PHACTR3Q96KR7 559 aa9.59□□□□□ -0.87
RAB40B-210ENST00000576148 ASB2Q96Q27 587 aa9.59□□□□□ -0.87
RAB40B-210ENST00000576148 VEZTQ9HBM0 779 aa9.59□□□□□ -0.87
RAB40B-210ENST00000576148 GABRQQ9UN88 632 aa9.59□□□□□ -0.87
RAB40B-210ENST00000576148 XDHP47989 1333 aa9.58□□□□□ -0.88
RAB40B-210ENST00000576148 BDP1A6H8Y1 2624 aa9.58□□□□□ -0.88
RAB40B-210ENST00000576148 LAMB2P55268 1798 aa9.58□□□□□ -0.88
RAB40B-210ENST00000576148 CLRN2A0PK11 232 aa9.58□□□□□ -0.88
RAB40B-210ENST00000576148 FLT3LGP49771 235 aa9.58□□□□□ -0.88
RAB40B-210ENST00000576148 RASA3Q14644 834 aa9.58□□□□□ -0.88
RAB40B-210ENST00000576148 TTLL5Q6EMB2 1281 aa9.58□□□□□ -0.88
RAB40B-210ENST00000576148 USP38Q8NB14 1042 aa9.58□□□□□ -0.88
RAB40B-210ENST00000576148 MTMR14Q8NCE2 650 aa9.58□□□□□ -0.88
RAB40B-210ENST00000576148 ZNF428Q96B54 188 aa9.58□□□□□ -0.88
RAB40B-210ENST00000576148 THUMPD2Q9BTF0 503 aaKnown RBP9.58□□□□□ -0.88
RAB40B-210ENST00000576148 LRFN3Q9BTN0 628 aa9.58□□□□□ -0.88
RAB40B-210ENST00000576148 XRN2Q9H0D6 950 aaKnown RBP eCLIP9.58□□□□□ -0.88
RAB40B-210ENST00000576148 TTYH1Q9H313 450 aaPredicted RBP9.58□□□□□ -0.88
RAB40B-210ENST00000576148 KNSTRNQ9Y448 316 aa9.58□□□□□ -0.88
RAB40B-210ENST00000576148 MRPS5P82675 430 aaKnown RBP9.57□□□□□ -0.88
RAB40B-210ENST00000576148 DCTN1Q14203 1278 aa9.57□□□□□ -0.88
RAB40B-210ENST00000576148 PNISRQ8TF01 805 aaKnown RBP9.57□□□□□ -0.88
RAB40B-210ENST00000576148 FAM89AQ96GI7 184 aa9.57□□□□□ -0.88
RAB40B-210ENST00000576148 ALPK3Q96L96 1907 aa9.56□□□□□ -0.88
RAB40B-210ENST00000576148 SPDYE5A6NIY4 337 aa9.56□□□□□ -0.88
RAB40B-210ENST00000576148 HTATSF1O43719 755 aaKnown RBP9.56□□□□□ -0.88
RAB40B-210ENST00000576148 PRKAR2BP31323 418 aa9.56□□□□□ -0.88
RAB40B-210ENST00000576148 MRE11P49959 708 aa9.56□□□□□ -0.88
RAB40B-210ENST00000576148 EIF4A1P60842 406 aaKnown RBP9.56□□□□□ -0.88
RAB40B-210ENST00000576148 SMAD3P84022 425 aaKnown RBP9.56□□□□□ -0.88
RAB40B-210ENST00000576148 IRF5Q13568 498 aa9.56□□□□□ -0.88
RAB40B-210ENST00000576148 COA1Q9GZY4 146 aa9.56□□□□□ -0.88
RAB40B-210ENST00000576148 SEC31BQ9NQW1 1179 aa9.56□□□□□ -0.88
RAB40B-210ENST00000576148 THEGQ9P2T0 379 aa9.56□□□□□ -0.88
RAB40B-210ENST00000576148 NCOR1O75376 2440 aa9.56□□□□□ -0.88
RAB40B-210ENST00000576148 PSME4Q14997 1843 aa9.55□□□□□ -0.88
RAB40B-210ENST00000576148 PDHXO00330 501 aa9.55□□□□□ -0.88
RAB40B-210ENST00000576148 IRF6O14896 467 aa9.55□□□□□ -0.88
RAB40B-210ENST00000576148 AIMP1Q12904 312 aaKnown RBP9.55□□□□□ -0.88
RAB40B-210ENST00000576148 TNFAIP1Q13829 316 aa9.55□□□□□ -0.88
RAB40B-210ENST00000576148 TMEM31Q5JXX7 168 aa9.55□□□□□ -0.88
RAB40B-210ENST00000576148 COPS6Q7L5N1 327 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms