RNA–Protein interactions for RNA: ENST00000575815.5

NCBP3-205, Transcript of nuclear cap binding subunit 3, human

TSL 2

Gene NCBP3, Length 4,096 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NCBP3-205	ENST00000575815	GJB2	P29033	226 aa		9.84	□□□□□ -0.83
NCBP3-205	ENST00000575815	MCM4	P33991	863 aa		9.84	□□□□□ -0.83
NCBP3-205	ENST00000575815	ZNF34	Q8IZ26	560 aa		9.84	□□□□□ -0.83
NCBP3-205	ENST00000575815	OGFOD1	Q8N543	542 aa		9.84	□□□□□ -0.83
NCBP3-205	ENST00000575815	VAT1L	Q9HCJ6	419 aa		9.84	□□□□□ -0.83
NCBP3-205	ENST00000575815	BCS1L	Q9Y276	419 aa		9.84	□□□□□ -0.83
NCBP3-205	ENST00000575815	XBP1	P17861	261 aa		9.83	□□□□□ -0.84
NCBP3-205	ENST00000575815	PDE6B	P35913	854 aa		9.83	□□□□□ -0.84
NCBP3-205	ENST00000575815	MFSD14B	Q5SR56	506 aa		9.83	□□□□□ -0.84
NCBP3-205	ENST00000575815	RASEF	Q8IZ41	740 aa		9.83	□□□□□ -0.84
NCBP3-205	ENST00000575815	SDR42E1	Q8WUS8	393 aa		9.83	□□□□□ -0.84
NCBP3-205	ENST00000575815	HELLS	Q9NRZ9	838 aa		9.83	□□□□□ -0.84
NCBP3-205	ENST00000575815	RAD50	Q92878	1312 aa		9.83	□□□□□ -0.84
NCBP3-205	ENST00000575815	ALDH1B1	P30837	517 aa		9.83	□□□□□ -0.84
NCBP3-205	ENST00000575815	GSE1	Q14687	1217 aa		9.83	□□□□□ -0.84
NCBP3-205	ENST00000575815	DRC7	Q8IY82	874 aa		9.83	□□□□□ -0.84
NCBP3-205	ENST00000575815	LARGE2	Q8N3Y3	721 aa		9.83	□□□□□ -0.84
NCBP3-205	ENST00000575815	TNPO1	Q92973	898 aa	Known RBP	9.83	□□□□□ -0.84
NCBP3-205	ENST00000575815	SH2B1	Q9NRF2	756 aa	Predicted RBP	9.83	□□□□□ -0.84
NCBP3-205	ENST00000575815	UBN2	Q6ZU65	1347 aa		9.83	□□□□□ -0.84
NCBP3-205	ENST00000575815	GOLGA8A	A7E2F4	631 aa		9.83	□□□□□ -0.84
NCBP3-205	ENST00000575815	JDP2	Q8WYK2	163 aa		9.83	□□□□□ -0.84
NCBP3-205	ENST00000575815	EYA3	Q99504	573 aa		9.83	□□□□□ -0.84
NCBP3-205	ENST00000575815	VEZT	Q9HBM0	779 aa		9.83	□□□□□ -0.84
NCBP3-205	ENST00000575815	KIF1A	Q12756	1690 aa		9.83	□□□□□ -0.84
NCBP3-205	ENST00000575815	PDE4B	Q07343	736 aa		9.82	□□□□□ -0.84
NCBP3-205	ENST00000575815	RABL6	Q3YEC7	729 aa	Predicted RBP	9.82	□□□□□ -0.84
NCBP3-205	ENST00000575815	ATG9A	Q7Z3C6	839 aa		9.82	□□□□□ -0.84
NCBP3-205	ENST00000575815	RNF214	Q8ND24	703 aa		9.82	□□□□□ -0.84
NCBP3-205	ENST00000575815	FBXO3	Q9UK99	471 aa		9.82	□□□□□ -0.84
NCBP3-205	ENST00000575815	MINPP1	Q9UNW1	487 aa		9.82	□□□□□ -0.84
NCBP3-205	ENST00000575815	BCL9	O00512	1426 aa		9.82	□□□□□ -0.84
NCBP3-205	ENST00000575815	SCNN1D	P51172	638 aa		9.82	□□□□□ -0.84
NCBP3-205	ENST00000575815	CTDSPL2	Q05D32	466 aa		9.82	□□□□□ -0.84
NCBP3-205	ENST00000575815	RASGRF1	Q13972	1273 aa		9.82	□□□□□ -0.84
NCBP3-205	ENST00000575815	UBE4A	Q14139	1066 aa		9.82	□□□□□ -0.84
NCBP3-205	ENST00000575815	SCARF1	Q14162	830 aa		9.82	□□□□□ -0.84
NCBP3-205	ENST00000575815	SKOR2	Q2VWA4	1001 aa	Predicted RBP	9.82	□□□□□ -0.84
NCBP3-205	ENST00000575815	SLC27A3	Q5K4L6	730 aa		9.82	□□□□□ -0.84
NCBP3-205	ENST00000575815	PEAK1	Q9H792	1746 aa		9.82	□□□□□ -0.84
NCBP3-205	ENST00000575815	GSTO1	P78417	241 aa		9.82	□□□□□ -0.84
NCBP3-205	ENST00000575815	STK38	Q15208	465 aa		9.82	□□□□□ -0.84
NCBP3-205	ENST00000575815	EZH2	Q15910	746 aa	Known RBP	9.82	□□□□□ -0.84
NCBP3-205	ENST00000575815	KIAA0825	Q8IV33	1275 aa		9.82	□□□□□ -0.84
NCBP3-205	ENST00000575815	ORC3	Q9UBD5	711 aa	Predicted RBP	9.82	□□□□□ -0.84
NCBP3-205	ENST00000575815	PPIP5K2	O43314	1243 aa		9.82	□□□□□ -0.84
NCBP3-205	ENST00000575815	HSPD1	P10809	573 aa	Known RBP	9.82	□□□□□ -0.84
NCBP3-205	ENST00000575815	MCAM	P43121	646 aa		9.82	□□□□□ -0.84
NCBP3-205	ENST00000575815	ME1	P48163	572 aa		9.82	□□□□□ -0.84
NCBP3-205	ENST00000575815	DHX32	Q7L7V1	743 aa	Known RBP	9.82	□□□□□ -0.84
NCBP3-205	ENST00000575815	TEX11	Q8IYF3	940 aa		9.82	□□□□□ -0.84
NCBP3-205	ENST00000575815	CTCFL	Q8NI51	663 aa	Predicted RBP	9.82	□□□□□ -0.84
NCBP3-205	ENST00000575815	DBNDD1	Q9H9R9	158 aa		9.82	□□□□□ -0.84
NCBP3-205	ENST00000575815	GJA3	Q9Y6H8	435 aa		9.82	□□□□□ -0.84
NCBP3-205	ENST00000575815	ATP10D	Q9P241	1426 aa		9.81	□□□□□ -0.84
NCBP3-205	ENST00000575815	MED1	Q15648	1581 aa	Predicted RBP	9.81	□□□□□ -0.84
NCBP3-205	ENST00000575815	PSD	A5PKW4	1024 aa	Predicted RBP	9.81	□□□□□ -0.84
NCBP3-205	ENST00000575815	HSPA4	P34932	840 aa		9.81	□□□□□ -0.84
NCBP3-205	ENST00000575815	TCP10	Q12799	353 aa		9.81	□□□□□ -0.84
NCBP3-205	ENST00000575815	WTAP	Q15007	396 aa		9.81	□□□□□ -0.84
NCBP3-205	ENST00000575815	ADCK5	Q3MIX3	580 aa		9.81	□□□□□ -0.84
NCBP3-205	ENST00000575815	RUFY3	Q7L099	469 aa		9.81	□□□□□ -0.84
NCBP3-205	ENST00000575815	WDR66	Q8TBY9	1149 aa		9.81	□□□□□ -0.84
NCBP3-205	ENST00000575815	C8orf76	Q96K31	380 aa		9.81	□□□□□ -0.84
NCBP3-205	ENST00000575815	SDF4	Q9BRK5	362 aa		9.81	□□□□□ -0.84
NCBP3-205	ENST00000575815	NCOA5	Q9HCD5	579 aa	Known RBP	9.81	□□□□□ -0.84
NCBP3-205	ENST00000575815	CIZ1	Q9ULV3	898 aa	Predicted RBP	9.81	□□□□□ -0.84
NCBP3-205	ENST00000575815	FGA	P02671	866 aa		9.81	□□□□□ -0.84
NCBP3-205	ENST00000575815	METAP2	P50579	478 aa	Known RBP eCLIP	9.81	□□□□□ -0.84
NCBP3-205	ENST00000575815	MAPKAPK5	Q8IW41	473 aa		9.81	□□□□□ -0.84
NCBP3-205	ENST00000575815	ESR2	Q92731	530 aa		9.81	□□□□□ -0.84
NCBP3-205	ENST00000575815	OSBP2	Q969R2	916 aa		9.81	□□□□□ -0.84
NCBP3-205	ENST00000575815	ZNF287	Q9HBT7	754 aa		9.81	□□□□□ -0.84
NCBP3-205	ENST00000575815	KRT85	P78386	507 aa		9.81	□□□□□ -0.84
NCBP3-205	ENST00000575815	L1TD1	Q5T7N2	865 aa	Known RBP	9.81	□□□□□ -0.84
NCBP3-205	ENST00000575815	CCDC73	Q6ZRK6	1079 aa		9.81	□□□□□ -0.84
NCBP3-205	ENST00000575815	PUS7L	Q9H0K6	701 aa	Known RBP	9.81	□□□□□ -0.84
NCBP3-205	ENST00000575815	BRMS1	Q9HCU9	246 aa		9.81	□□□□□ -0.84
NCBP3-205	ENST00000575815	GPR108	Q9NPR9	543 aa		9.81	□□□□□ -0.84
NCBP3-205	ENST00000575815	SETD1A	O15047	1707 aa	Known RBP	9.81	□□□□□ -0.84
NCBP3-205	ENST00000575815	AKAP12	Q02952	1782 aa		9.8	□□□□□ -0.84
NCBP3-205	ENST00000575815	CDKL5	O76039	1030 aa		9.8	□□□□□ -0.84
NCBP3-205	ENST00000575815	CD2BP2	O95400	341 aa	Known RBP	9.8	□□□□□ -0.84
NCBP3-205	ENST00000575815	RC3H1	Q5TC82	1133 aa	Known RBP	9.8	□□□□□ -0.84
NCBP3-205	ENST00000575815	CATIP	Q7Z7H3	387 aa		9.8	□□□□□ -0.84
NCBP3-205	ENST00000575815	SLC26A6	Q9BXS9	759 aa		9.8	□□□□□ -0.84
NCBP3-205	ENST00000575815	BSDC1	Q9NW68	430 aa	Predicted RBP	9.8	□□□□□ -0.84
NCBP3-205	ENST00000575815	TTF2	Q9UNY4	1162 aa	Known RBP	9.8	□□□□□ -0.84
NCBP3-205	ENST00000575815	RIPOR2	Q9Y4F9	1068 aa		9.8	□□□□□ -0.84
NCBP3-205	ENST00000575815	USP17L12	C9JPN9	530 aa		9.8	□□□□□ -0.84
NCBP3-205	ENST00000575815	USP17L21	D6R901	530 aa		9.8	□□□□□ -0.84
NCBP3-205	ENST00000575815	ZBTB43	O43298	467 aa		9.8	□□□□□ -0.84
NCBP3-205	ENST00000575815	STX6	O43752	255 aa		9.8	□□□□□ -0.84
NCBP3-205	ENST00000575815	TSPY3	P0CV98	308 aa		9.8	□□□□□ -0.84
NCBP3-205	ENST00000575815	TSPY8	P0CW00	308 aa		9.8	□□□□□ -0.84
NCBP3-205	ENST00000575815	HOMER1	Q86YM7	354 aa		9.8	□□□□□ -0.84
NCBP3-205	ENST00000575815	TGFBRAP1	Q8WUH2	860 aa		9.8	□□□□□ -0.84
NCBP3-205	ENST00000575815	SNX21	Q969T3	373 aa		9.8	□□□□□ -0.84
NCBP3-205	ENST00000575815	MYL10	Q9BUA6	226 aa		9.8	□□□□□ -0.84
NCBP3-205	ENST00000575815	PIH1D3	Q9NQM4	214 aa	Known RBP	9.8	□□□□□ -0.84

Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms