RNA–Protein interactions for RNA: ENST00000573584.5

NUP88-207, Transcript of nucleoporin 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP88, Length 2,916 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-207ENST00000573584 EVCP57679 992 aa18.22■□□□□ 0.51
NUP88-207ENST00000573584 PROSER2Q86WR7 435 aaPredicted RBP18.22■□□□□ 0.51
NUP88-207ENST00000573584 FBXL16Q8N461 479 aa18.22■□□□□ 0.51
NUP88-207ENST00000573584 C8orf76Q96K31 380 aa18.22■□□□□ 0.51
NUP88-207ENST00000573584 OGFRQ9NZT2 677 aa18.22■□□□□ 0.51
NUP88-207ENST00000573584 CTNNA3Q9UI47 895 aa18.22■□□□□ 0.51
NUP88-207ENST00000573584 CLIC4Q9Y696 253 aa18.22■□□□□ 0.51
NUP88-207ENST00000573584 HAND2P61296 217 aa18.22■□□□□ 0.51
NUP88-207ENST00000573584 KIAA1468Q9P260 1216 aa18.22■□□□□ 0.51
NUP88-207ENST00000573584 ARFGEF2Q9Y6D5 1785 aa18.22■□□□□ 0.51
NUP88-207ENST00000573584 GSDMDP57764 484 aa18.22■□□□□ 0.51
NUP88-207ENST00000573584 CCAR2Q8N163 923 aaKnown RBP18.22■□□□□ 0.51
NUP88-207ENST00000573584 KCNG4Q8TDN1 519 aa18.21■□□□□ 0.51
NUP88-207ENST00000573584 CHRNA2Q15822 529 aa18.21■□□□□ 0.51
NUP88-207ENST00000573584 WASHC4Q2M389 1173 aa18.21■□□□□ 0.51
NUP88-207ENST00000573584 DPCR1Q3MIW9 517 aa18.21■□□□□ 0.51
NUP88-207ENST00000573584 NBPF11Q86T75 865 aa18.21■□□□□ 0.51
NUP88-207ENST00000573584 PUS3Q9BZE2 481 aaKnown RBP18.21■□□□□ 0.51
NUP88-207ENST00000573584 C1orf167Q5SNV9 1468 aa18.21■□□□□ 0.51
NUP88-207ENST00000573584 MYH15Q9Y2K3 1946 aa18.21■□□□□ 0.51
NUP88-207ENST00000573584 DHX16O60231 1041 aaKnown RBP18.2■□□□□ 0.5
NUP88-207ENST00000573584 IMMTQ16891 758 aaKnown RBP18.2■□□□□ 0.5
NUP88-207ENST00000573584 CEP126Q9P2H0 1117 aa18.2■□□□□ 0.5
NUP88-207ENST00000573584 FBXO18Q8NFZ0 1043 aa18.2■□□□□ 0.5
NUP88-207ENST00000573584 CABLES1Q8TDN4 633 aa18.2■□□□□ 0.5
NUP88-207ENST00000573584 ZBTB3Q9H5J0 574 aa18.2■□□□□ 0.5
NUP88-207ENST00000573584 POLR3EQ9NVU0 708 aa18.2■□□□□ 0.5
NUP88-207ENST00000573584 ORC3Q9UBD5 711 aaPredicted RBP18.2■□□□□ 0.5
NUP88-207ENST00000573584 ZNF215Q9UL58 517 aaPredicted RBP18.2■□□□□ 0.5
NUP88-207ENST00000573584 KLF18A0A0U1RQI7 1052 aa18.19■□□□□ 0.5
NUP88-207ENST00000573584 SPTLC2O15270 562 aa18.19■□□□□ 0.5
NUP88-207ENST00000573584 CIAO1O76071 339 aa18.19■□□□□ 0.5
NUP88-207ENST00000573584 LRRFIP1Q32MZ4 808 aaKnown RBP18.19■□□□□ 0.5
NUP88-207ENST00000573584 GORABQ5T7V8 394 aa18.19■□□□□ 0.5
NUP88-207ENST00000573584 OSBPL5Q9H0X9 879 aaPredicted RBP18.19■□□□□ 0.5
NUP88-207ENST00000573584 PRC1O43663 620 aa18.19■□□□□ 0.5
NUP88-207ENST00000573584 YEATS4O95619 227 aa18.19■□□□□ 0.5
NUP88-207ENST00000573584 CCDC158Q5M9N0 1113 aa18.19■□□□□ 0.5
NUP88-207ENST00000573584 CCDC191Q8NCU4 936 aa18.19■□□□□ 0.5
NUP88-207ENST00000573584 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.19■□□□□ 0.5
NUP88-207ENST00000573584 DDX17Q92841 729 aaKnown RBP18.19■□□□□ 0.5
NUP88-207ENST00000573584 IMPACTQ9P2X3 320 aa18.19■□□□□ 0.5
NUP88-207ENST00000573584 GOLGA8BA8MQT2 603 aa18.19■□□□□ 0.5
NUP88-207ENST00000573584 FGAP02671 866 aa18.19■□□□□ 0.5
NUP88-207ENST00000573584 KIF18AQ8NI77 898 aa18.19■□□□□ 0.5
NUP88-207ENST00000573584 C19orf44Q9H6X5 657 aa18.19■□□□□ 0.5
NUP88-207ENST00000573584 ATG3Q9NT62 314 aa18.19■□□□□ 0.5
NUP88-207ENST00000573584 TMEM94Q12767 1356 aa18.18■□□□□ 0.5
NUP88-207ENST00000573584 CPLX1O14810 134 aa18.18■□□□□ 0.5
NUP88-207ENST00000573584 SMC2O95347 1197 aa18.18■□□□□ 0.5
NUP88-207ENST00000573584 A1BGP04217 495 aa18.18■□□□□ 0.5
NUP88-207ENST00000573584 MYSM1Q5VVJ2 828 aa18.18■□□□□ 0.5
NUP88-207ENST00000573584 SYNE3Q6ZMZ3 975 aa18.18■□□□□ 0.5
NUP88-207ENST00000573584 BPIFA3Q9BQP9 254 aa18.18■□□□□ 0.5
NUP88-207ENST00000573584 KCND1Q9NSA2 647 aa18.18■□□□□ 0.5
NUP88-207ENST00000573584 GJB4Q9NTQ9 266 aa18.18■□□□□ 0.5
NUP88-207ENST00000573584 MST1RQ04912 1400 aa18.18■□□□□ 0.5
NUP88-207ENST00000573584 BIN1O00499 593 aa18.18■□□□□ 0.5
NUP88-207ENST00000573584 FOXP2O15409 715 aa18.18■□□□□ 0.5
NUP88-207ENST00000573584 SLC3A2P08195 630 aaKnown RBP18.18■□□□□ 0.5
NUP88-207ENST00000573584 TTC39AQ5SRH9 613 aa18.18■□□□□ 0.5
NUP88-207ENST00000573584 RAB11FIP4Q86YS3 637 aa18.18■□□□□ 0.5
NUP88-207ENST00000573584 XPO4Q9C0E2 1151 aaKnown RBP18.18■□□□□ 0.5
NUP88-207ENST00000573584 HPS5Q9UPZ3 1129 aa18.18■□□□□ 0.5
NUP88-207ENST00000573584 ZNF202O95125 648 aa18.17■□□□□ 0.5
NUP88-207ENST00000573584 BRAPQ7Z569 592 aa18.17■□□□□ 0.5
NUP88-207ENST00000573584 IFNKQ9P0W0 207 aa18.17■□□□□ 0.5
NUP88-207ENST00000573584 DDX41Q9UJV9 622 aaKnown RBP18.17■□□□□ 0.5
NUP88-207ENST00000573584 NOL12Q9UGY1 213 aaKnown RBP eCLIP18.17■□□□□ 0.5
NUP88-207ENST00000573584 V9GYY5 206 aaPredicted RBP18.17■□□□□ 0.5
NUP88-207ENST00000573584 ZFYP08048 801 aaPredicted RBP18.16■□□□□ 0.5
NUP88-207ENST00000573584 MB21D2Q8IYB1 491 aaPredicted RBP18.16■□□□□ 0.5
NUP88-207ENST00000573584 NEDD4P46934 1319 aa18.16■□□□□ 0.5
NUP88-207ENST00000573584 ADORA1P30542 326 aa18.16■□□□□ 0.5
NUP88-207ENST00000573584 CCDC57Q2TAC2 916 aa18.16■□□□□ 0.5
NUP88-207ENST00000573584 TMC6Q7Z403 805 aa18.16■□□□□ 0.5
NUP88-207ENST00000573584 NCOA7Q8NI08 942 aa18.16■□□□□ 0.5
NUP88-207ENST00000573584 XAGE2Q96GT9 111 aa18.16■□□□□ 0.5
NUP88-207ENST00000573584 KIF2AO00139 706 aaPredicted RBP18.16■□□□□ 0.5
NUP88-207ENST00000573584 TPM4P67936 248 aa18.16■□□□□ 0.5
NUP88-207ENST00000573584 ANO1Q5XXA6 986 aa18.16■□□□□ 0.5
NUP88-207ENST00000573584 RALYLQ86SE5 291 aaKnown RBP18.16■□□□□ 0.5
NUP88-207ENST00000573584 ABCC6O95255 1503 aa18.15■□□□□ 0.5
NUP88-207ENST00000573584 NLRP12P59046 1061 aa18.15■□□□□ 0.5
NUP88-207ENST00000573584 HSP90AB3PQ58FF7 597 aa18.15■□□□□ 0.5
NUP88-207ENST00000573584 ERO1AQ96HE7 468 aa18.15■□□□□ 0.5
NUP88-207ENST00000573584 AKAP2Q9Y2D5 859 aa18.15■□□□□ 0.5
NUP88-207ENST00000573584 KIF28PB7ZC32 967 aa18.15■□□□□ 0.5
NUP88-207ENST00000573584 ANTXR2P58335 489 aa18.15■□□□□ 0.5
NUP88-207ENST00000573584 E4F1Q66K89 784 aaPredicted RBP18.15■□□□□ 0.5
NUP88-207ENST00000573584 CCDC150Q8NCX0 1101 aa18.15■□□□□ 0.5
NUP88-207ENST00000573584 PUS7LQ9H0K6 701 aaKnown RBP18.15■□□□□ 0.5
NUP88-207ENST00000573584 ZNF213O14771 459 aa18.14■□□□□ 0.49
NUP88-207ENST00000573584 IGSF3O75054 1194 aa18.14■□□□□ 0.49
NUP88-207ENST00000573584 SFPQP23246 707 aaKnown RBP eCLIP18.14■□□□□ 0.49
NUP88-207ENST00000573584 CMA1P23946 247 aa18.14■□□□□ 0.49
NUP88-207ENST00000573584 AXDND1Q5T1B0 1012 aaPredicted RBP18.14■□□□□ 0.49
NUP88-207ENST00000573584 ARMCX5Q6P1M9 558 aa18.14■□□□□ 0.49
NUP88-207ENST00000573584 ZNF397Q8NF99 534 aaPredicted RBP18.14■□□□□ 0.49
NUP88-207ENST00000573584 KIF20AO95235 890 aa18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 92 ms