RNA–Protein interactions for RNA: ENST00000573521.1

PCDHGA9-201, Transcript of protocadherin gamma subfamily A, 9, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA9, Length 4,605 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA9-201ENST00000573521 LMBRD1Q9NUN5 540 aa14.04□□□□□ -0.16
PCDHGA9-201ENST00000573521 KDM5AP29375 1690 aaKnown RBP14.04□□□□□ -0.16
PCDHGA9-201ENST00000573521 KRT2P35908 639 aa14.04□□□□□ -0.16
PCDHGA9-201ENST00000573521 MAATS1Q7Z4T9 603 aa14.04□□□□□ -0.16
PCDHGA9-201ENST00000573521 FCHSD1Q86WN1 690 aa14.04□□□□□ -0.16
PCDHGA9-201ENST00000573521 DCAF5Q96JK2 942 aa14.04□□□□□ -0.16
PCDHGA9-201ENST00000573521 NDC80O14777 642 aa14.04□□□□□ -0.16
PCDHGA9-201ENST00000573521 CFAP58Q5T655 872 aa14.04□□□□□ -0.16
PCDHGA9-201ENST00000573521 XAGE3Q8WTP9 111 aa14.03□□□□□ -0.16
PCDHGA9-201ENST00000573521 BAG1Q99933 345 aaPredicted RBP14.03□□□□□ -0.16
PCDHGA9-201ENST00000573521 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP14.03□□□□□ -0.16
PCDHGA9-201ENST00000573521 TMCO5BA8MYB1 307 aa14.03□□□□□ -0.16
PCDHGA9-201ENST00000573521 ATP8B1O43520 1251 aa14.03□□□□□ -0.16
PCDHGA9-201ENST00000573521 ZNF75DP51815 510 aa14.03□□□□□ -0.16
PCDHGA9-201ENST00000573521 TMTC1Q8IUR5 882 aa14.03□□□□□ -0.16
PCDHGA9-201ENST00000573521 NUCKS1Q9H1E3 243 aaKnown RBP14.03□□□□□ -0.16
PCDHGA9-201ENST00000573521 TBX22Q9Y458 520 aa14.03□□□□□ -0.16
PCDHGA9-201ENST00000573521 ATP2A1O14983 1001 aa14.03□□□□□ -0.16
PCDHGA9-201ENST00000573521 IL13P35225 146 aa14.03□□□□□ -0.16
PCDHGA9-201ENST00000573521 MTHFSDQ2M296 383 aaKnown RBP14.03□□□□□ -0.16
PCDHGA9-201ENST00000573521 ZSCAN29Q8IWY8 852 aaPredicted RBP14.03□□□□□ -0.16
PCDHGA9-201ENST00000573521 SREK1Q8WXA9 508 aaKnown RBP14.03□□□□□ -0.16
PCDHGA9-201ENST00000573521 RBSNQ9H1K0 784 aa14.03□□□□□ -0.16
PCDHGA9-201ENST00000573521 EXOC5O00471 708 aa14.03□□□□□ -0.16
PCDHGA9-201ENST00000573521 PTGS1P23219 599 aa14.03□□□□□ -0.16
PCDHGA9-201ENST00000573521 POTEDQ86YR6 584 aa14.03□□□□□ -0.16
PCDHGA9-201ENST00000573521 MKRN1Q9UHC7 482 aaKnown RBP14.03□□□□□ -0.16
PCDHGA9-201ENST00000573521 CFAP74Q9C0B2 1584 aa14.02□□□□□ -0.16
PCDHGA9-201ENST00000573521 CCDC96Q2M329 555 aa14.02□□□□□ -0.16
PCDHGA9-201ENST00000573521 IDEP14735 1019 aa14.02□□□□□ -0.16
PCDHGA9-201ENST00000573521 NOP2P46087 812 aaKnown RBP14.02□□□□□ -0.16
PCDHGA9-201ENST00000573521 DDX46Q7L014 1031 aaKnown RBP14.02□□□□□ -0.16
PCDHGA9-201ENST00000573521 CCDC50Q8IVM0 306 aa14.02□□□□□ -0.16
PCDHGA9-201ENST00000573521 IP6K1Q92551 441 aa14.02□□□□□ -0.16
PCDHGA9-201ENST00000573521 FBXO3Q9UK99 471 aa14.02□□□□□ -0.16
PCDHGA9-201ENST00000573521 HDAC9Q9UKV0 1011 aa14.02□□□□□ -0.16
PCDHGA9-201ENST00000573521 PTCD1O75127 700 aaKnown RBP14.02□□□□□ -0.17
PCDHGA9-201ENST00000573521 DEXIO95424 95 aa14.02□□□□□ -0.17
PCDHGA9-201ENST00000573521 CAPN2P17655 700 aa14.02□□□□□ -0.17
PCDHGA9-201ENST00000573521 ATP5DP30049 168 aa14.02□□□□□ -0.17
PCDHGA9-201ENST00000573521 COPS6Q7L5N1 327 aa14.02□□□□□ -0.17
PCDHGA9-201ENST00000573521 LMBR1LQ6UX01 489 aa14.02□□□□□ -0.17
PCDHGA9-201ENST00000573521 MPHOSPH10O00566 681 aaKnown RBP14.01□□□□□ -0.17
PCDHGA9-201ENST00000573521 FBXO31Q5XUX0 539 aaPredicted RBP14.01□□□□□ -0.17
PCDHGA9-201ENST00000573521 OSBPL3Q9H4L5 887 aa14.01□□□□□ -0.17
PCDHGA9-201ENST00000573521 IFNKQ9P0W0 207 aa14.01□□□□□ -0.17
PCDHGA9-201ENST00000573521 MTRF1LQ9UGC7 380 aaKnown RBP14.01□□□□□ -0.17
PCDHGA9-201ENST00000573521 RPL13P26373 211 aaKnown RBP14.01□□□□□ -0.17
PCDHGA9-201ENST00000573521 ACTN2P35609 894 aa14.01□□□□□ -0.17
PCDHGA9-201ENST00000573521 KRT79Q5XKE5 535 aa14.01□□□□□ -0.17
PCDHGA9-201ENST00000573521 FAM76AQ8TAV0 307 aa14.01□□□□□ -0.17
PCDHGA9-201ENST00000573521 CNKSR2Q8WXI2 1034 aa14.01□□□□□ -0.17
PCDHGA9-201ENST00000573521 DSCC1Q9BVC3 393 aa14.01□□□□□ -0.17
PCDHGA9-201ENST00000573521 MYOM2P54296 1465 aa14□□□□□ -0.17
PCDHGA9-201ENST00000573521 KRT13P13646 458 aa14□□□□□ -0.17
PCDHGA9-201ENST00000573521 NLRP12P59046 1061 aa14□□□□□ -0.17
PCDHGA9-201ENST00000573521 SPATS2Q86XZ4 545 aaKnown RBP14□□□□□ -0.17
PCDHGA9-201ENST00000573521 TRIML1Q8N9V2 468 aa14□□□□□ -0.17
PCDHGA9-201ENST00000573521 CABP5Q9NP86 173 aa14□□□□□ -0.17
PCDHGA9-201ENST00000573521 ATP7AQ04656 1500 aa14□□□□□ -0.17
PCDHGA9-201ENST00000573521 AATKQ6ZMQ8 1374 aa14□□□□□ -0.17
PCDHGA9-201ENST00000573521 NT5C2P49902 561 aa14□□□□□ -0.17
PCDHGA9-201ENST00000573521 MNAT1P51948 309 aa14□□□□□ -0.17
PCDHGA9-201ENST00000573521 ANO1Q5XXA6 986 aa14□□□□□ -0.17
PCDHGA9-201ENST00000573521 CYP26C1Q6V0L0 522 aa14□□□□□ -0.17
PCDHGA9-201ENST00000573521 PPM1EQ8WY54 764 aa14□□□□□ -0.17
PCDHGA9-201ENST00000573521 FERMT2Q96AC1 680 aa14□□□□□ -0.17
PCDHGA9-201ENST00000573521 PRDM10Q9NQV6 1147 aa14□□□□□ -0.17
PCDHGA9-201ENST00000573521 TRIM35Q9UPQ4 493 aa14□□□□□ -0.17
PCDHGA9-201ENST00000573521 SNX14Q9Y5W7 946 aa14□□□□□ -0.17
PCDHGA9-201ENST00000573521 SEC24BO95487 1268 aa14□□□□□ -0.17
PCDHGA9-201ENST00000573521 BRD3Q15059 726 aa14□□□□□ -0.17
PCDHGA9-201ENST00000573521 NEK11Q8NG66 645 aa14□□□□□ -0.17
PCDHGA9-201ENST00000573521 MRFAP1L1Q96HT8 127 aa14□□□□□ -0.17
PCDHGA9-201ENST00000573521 NAPGQ99747 312 aaPredicted RBP14□□□□□ -0.17
PCDHGA9-201ENST00000573521 NYXQ9GZU5 481 aa14□□□□□ -0.17
PCDHGA9-201ENST00000573521 ERBB4Q15303 1308 aa14□□□□□ -0.17
PCDHGA9-201ENST00000573521 LMOD1P29536 600 aaPredicted RBP13.99□□□□□ -0.17
PCDHGA9-201ENST00000573521 SLC9C2Q5TAH2 1124 aa13.99□□□□□ -0.17
PCDHGA9-201ENST00000573521 CCDC174Q6PII3 467 aa13.99□□□□□ -0.17
PCDHGA9-201ENST00000573521 CCDC121Q6ZUS5 278 aa13.99□□□□□ -0.17
PCDHGA9-201ENST00000573521 ZCRB1Q8TBF4 217 aaKnown RBP13.99□□□□□ -0.17
PCDHGA9-201ENST00000573521 CCDC113Q9H0I3 377 aa13.99□□□□□ -0.17
PCDHGA9-201ENST00000573521 GOPCQ9HD26 462 aa13.99□□□□□ -0.17
PCDHGA9-201ENST00000573521 SWAP70Q9UH65 585 aa13.99□□□□□ -0.17
PCDHGA9-201ENST00000573521 PPP2R5EQ16537 467 aa13.99□□□□□ -0.17
PCDHGA9-201ENST00000573521 MPHOSPH6Q99547 160 aaKnown RBP13.99□□□□□ -0.17
PCDHGA9-201ENST00000573521 RASSF4Q9H2L5 321 aa13.99□□□□□ -0.17
PCDHGA9-201ENST00000573521 SLC4A4Q9Y6R1 1079 aa13.99□□□□□ -0.17
PCDHGA9-201ENST00000573521 RGS12O14924 1447 aa13.99□□□□□ -0.17
PCDHGA9-201ENST00000573521 SLC27A2O14975 620 aa13.99□□□□□ -0.17
PCDHGA9-201ENST00000573521 TSPYL6Q8N831 410 aa13.99□□□□□ -0.17
PCDHGA9-201ENST00000573521 CCDC26Q8TAB7 109 aa13.99□□□□□ -0.17
PCDHGA9-201ENST00000573521 APPBP2Q92624 585 aa13.99□□□□□ -0.17
PCDHGA9-201ENST00000573521 LZTS2Q9BRK4 669 aa13.99□□□□□ -0.17
PCDHGA9-201ENST00000573521 ANKRD2Q9GZV1 360 aa13.99□□□□□ -0.17
PCDHGA9-201ENST00000573521 IQSEC3Q9UPP2 1182 aaPredicted RBP13.99□□□□□ -0.17
PCDHGA9-201ENST00000573521 KIF4AO95239 1232 aa13.99□□□□□ -0.17
PCDHGA9-201ENST00000573521 RBM5P52756 815 aaKnown RBP eCLIP13.99□□□□□ -0.17
PCDHGA9-201ENST00000573521 DTHD1Q6ZMT9 781 aa13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms