RNA–Protein interactions for RNA: ENST00000572809.1

NUP88-205, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 771 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-205ENST00000572809 SF3B3Q15393 1217 aaKnown RBP9.53□□□□□ -0.88
NUP88-205ENST00000572809 KSR2Q6VAB6 950 aa9.53□□□□□ -0.88
NUP88-205ENST00000572809 ZBTB38Q8NAP3 1195 aaPredicted RBP9.53□□□□□ -0.88
NUP88-205ENST00000572809 DDRGK1Q96HY6 314 aa9.53□□□□□ -0.88
NUP88-205ENST00000572809 TMUB1Q9BVT8 246 aa9.53□□□□□ -0.88
NUP88-205ENST00000572809 MAP3K2Q9Y2U5 619 aa9.53□□□□□ -0.88
NUP88-205ENST00000572809 ABCC4O15439 1325 aa9.53□□□□□ -0.88
NUP88-205ENST00000572809 ANKRD36CQ5JPF3 1778 aa9.52□□□□□ -0.88
NUP88-205ENST00000572809 DICER1Q9UPY3 1922 aaKnown RBP9.52□□□□□ -0.88
NUP88-205ENST00000572809 PI4KAP2A4QPH2 592 aa9.52□□□□□ -0.89
NUP88-205ENST00000572809 FZD9O00144 591 aa9.52□□□□□ -0.89
NUP88-205ENST00000572809 HSP90B1P14625 803 aaKnown RBP9.52□□□□□ -0.89
NUP88-205ENST00000572809 EXOSC9Q06265 439 aaKnown RBP9.52□□□□□ -0.89
NUP88-205ENST00000572809 GRAPQ13588 217 aa9.52□□□□□ -0.89
NUP88-205ENST00000572809 G2E3Q7L622 706 aa9.52□□□□□ -0.89
NUP88-205ENST00000572809 MPNDQ8N594 471 aa9.52□□□□□ -0.89
NUP88-205ENST00000572809 PI4KAP1Q8N8J0 262 aa9.52□□□□□ -0.89
NUP88-205ENST00000572809 SMC1BQ8NDV3 1235 aa9.52□□□□□ -0.89
NUP88-205ENST00000572809 GRAPLQ8TC17 118 aaPredicted RBP9.52□□□□□ -0.89
NUP88-205ENST00000572809 VPS33BQ9H267 617 aa9.52□□□□□ -0.89
NUP88-205ENST00000572809 CWC25Q9NXE8 425 aaPredicted RBP9.52□□□□□ -0.89
NUP88-205ENST00000572809 FANCIQ9NVI1 1328 aa9.52□□□□□ -0.89
NUP88-205ENST00000572809 PCCAP05165 728 aaPredicted RBP9.51□□□□□ -0.89
NUP88-205ENST00000572809 EIF6P56537 245 aaKnown RBP9.51□□□□□ -0.89
NUP88-205ENST00000572809 NEXNQ0ZGT2 675 aa9.51□□□□□ -0.89
NUP88-205ENST00000572809 TRIM67Q6ZTA4 783 aa9.51□□□□□ -0.89
NUP88-205ENST00000572809 TMC4Q7Z404 712 aa9.51□□□□□ -0.89
NUP88-205ENST00000572809 SLC51AQ86UW1 340 aa9.51□□□□□ -0.89
NUP88-205ENST00000572809 LARGE2Q8N3Y3 721 aa9.51□□□□□ -0.89
NUP88-205ENST00000572809 SUPT20HQ8NEM7 779 aa9.51□□□□□ -0.89
NUP88-205ENST00000572809 JARID2Q92833 1246 aaPredicted RBP9.51□□□□□ -0.89
NUP88-205ENST00000572809 MYH16Q9H6N6 1097 aa9.51□□□□□ -0.89
NUP88-205ENST00000572809 SNED1Q8TER0 1413 aa9.5□□□□□ -0.89
NUP88-205ENST00000572809 IQCA1LA6NCM1 817 aa9.5□□□□□ -0.89
NUP88-205ENST00000572809 PDE8AO60658 829 aa9.5□□□□□ -0.89
NUP88-205ENST00000572809 DPP8Q6V1X1 898 aaPredicted RBP9.5□□□□□ -0.89
NUP88-205ENST00000572809 CELF1Q92879 486 aaKnown RBP9.5□□□□□ -0.89
NUP88-205ENST00000572809 RTFDC1Q9BY42 306 aaPredicted RBP9.5□□□□□ -0.89
NUP88-205ENST00000572809 CDHR5Q9HBB8 845 aa9.5□□□□□ -0.89
NUP88-205ENST00000572809 TIAM2Q8IVF5 1701 aa9.5□□□□□ -0.89
NUP88-205ENST00000572809 WDR90Q96KV7 1748 aa9.49□□□□□ -0.89
NUP88-205ENST00000572809 PPIP5K2O43314 1243 aa9.49□□□□□ -0.89
NUP88-205ENST00000572809 IGKV5-2P06315 115 aa9.49□□□□□ -0.89
NUP88-205ENST00000572809 SLC19A1P41440 591 aa9.49□□□□□ -0.89
NUP88-205ENST00000572809 RPS8P62241 208 aaKnown RBP9.49□□□□□ -0.89
NUP88-205ENST00000572809 FLIIQ13045 1269 aa9.49□□□□□ -0.89
NUP88-205ENST00000572809 TTLL12Q14166 644 aaPredicted RBP9.49□□□□□ -0.89
NUP88-205ENST00000572809 AOC3Q16853 763 aa9.49□□□□□ -0.89
NUP88-205ENST00000572809 PKDCCQ504Y2 493 aa9.49□□□□□ -0.89
NUP88-205ENST00000572809 SWT1Q5T5J6 900 aaKnown RBP9.49□□□□□ -0.89
NUP88-205ENST00000572809 GPC2Q8N158 579 aa9.49□□□□□ -0.89
NUP88-205ENST00000572809 FAM117AQ9C073 453 aa9.49□□□□□ -0.89
NUP88-205ENST00000572809 HACL1Q9UJ83 578 aa9.49□□□□□ -0.89
NUP88-205ENST00000572809 GJA3Q9Y6H8 435 aa9.49□□□□□ -0.89
NUP88-205ENST00000572809 ZNF541Q9H0D2 1346 aa9.49□□□□□ -0.89
NUP88-205ENST00000572809 FKBP5Q13451 457 aaPredicted RBP9.48□□□□□ -0.89
NUP88-205ENST00000572809 CWF19L2Q2TBE0 894 aaKnown RBP9.48□□□□□ -0.89
NUP88-205ENST00000572809 CCDC152Q4G0S7 254 aa9.48□□□□□ -0.89
NUP88-205ENST00000572809 NIM1KQ8IY84 436 aa9.48□□□□□ -0.89
NUP88-205ENST00000572809 DNAAF4Q8WXU2 420 aa9.48□□□□□ -0.89
NUP88-205ENST00000572809 TAF1DQ9H5J8 278 aaPredicted RBP9.48□□□□□ -0.89
NUP88-205ENST00000572809 SEC31BQ9NQW1 1179 aa9.48□□□□□ -0.89
NUP88-205ENST00000572809 NPDC1Q9NQX5 325 aaPredicted RBP9.48□□□□□ -0.89
NUP88-205ENST00000572809 NSFL1CQ9UNZ2 370 aaKnown RBP9.48□□□□□ -0.89
NUP88-205ENST00000572809 CDHR2Q9BYE9 1310 aa9.48□□□□□ -0.89
NUP88-205ENST00000572809 LAMB2P55268 1798 aa9.47□□□□□ -0.89
NUP88-205ENST00000572809 NEURL1BA8MQ27 555 aa9.47□□□□□ -0.89
NUP88-205ENST00000572809 H7C1W4 665 aa9.47□□□□□ -0.89
NUP88-205ENST00000572809 CCER2I3L3R5 266 aa9.47□□□□□ -0.89
NUP88-205ENST00000572809 EPHX2P34913 555 aa9.47□□□□□ -0.89
NUP88-205ENST00000572809 KIAA2012Q0VF49 1180 aa9.47□□□□□ -0.89
NUP88-205ENST00000572809 WASHC4Q2M389 1173 aa9.47□□□□□ -0.89
NUP88-205ENST00000572809 EAPPQ56P03 285 aaPredicted RBP9.47□□□□□ -0.89
NUP88-205ENST00000572809 PNMA8AQ86V59 439 aaPredicted RBP9.47□□□□□ -0.89
NUP88-205ENST00000572809 SLF2Q8IX21 1173 aa9.47□□□□□ -0.89
NUP88-205ENST00000572809 PARP9Q8IXQ6 854 aa9.47□□□□□ -0.89
NUP88-205ENST00000572809 DNAJC5GQ8N7S2 189 aa9.47□□□□□ -0.89
NUP88-205ENST00000572809 CCDC85AQ96PX6 553 aaPredicted RBP9.47□□□□□ -0.89
NUP88-205ENST00000572809 ZNRF3Q9ULT6 936 aa9.47□□□□□ -0.89
NUP88-205ENST00000572809 ZNF521Q96K83 1311 aa9.47□□□□□ -0.89
NUP88-205ENST00000572809 DDX60Q8IY21 1712 aaKnown RBP9.47□□□□□ -0.89
NUP88-205ENST00000572809 RNF223E7ERA6 249 aa9.46□□□□□ -0.9
NUP88-205ENST00000572809 C6orf229H3BNL8 230 aa9.46□□□□□ -0.9
NUP88-205ENST00000572809 LMOD1P29536 600 aaPredicted RBP9.46□□□□□ -0.9
NUP88-205ENST00000572809 GPSM2P81274 684 aa9.46□□□□□ -0.9
NUP88-205ENST00000572809 HTRA3P83110 453 aa9.46□□□□□ -0.9
NUP88-205ENST00000572809 CXCL9Q07325 125 aa9.46□□□□□ -0.9
NUP88-205ENST00000572809 GCKRQ14397 625 aa9.46□□□□□ -0.9
NUP88-205ENST00000572809 LDHDQ86WU2 507 aa9.46□□□□□ -0.9
NUP88-205ENST00000572809 LINS1Q8NG48 757 aa9.46□□□□□ -0.9
NUP88-205ENST00000572809 TTLL11Q8NHH1 800 aa9.46□□□□□ -0.9
NUP88-205ENST00000572809 EMID1Q96A84 441 aaPredicted RBP9.46□□□□□ -0.9
NUP88-205ENST00000572809 TAF1P21675 1872 aa9.46□□□□□ -0.9
NUP88-205ENST00000572809 E9PSI1 815 aa9.45□□□□□ -0.9
NUP88-205ENST00000572809 F6X3S4 739 aa9.45□□□□□ -0.9
NUP88-205ENST00000572809 DGAT1O75907 488 aa9.45□□□□□ -0.9
NUP88-205ENST00000572809 EPS15P42566 896 aa9.45□□□□□ -0.9
NUP88-205ENST00000572809 CTSWP56202 376 aa9.45□□□□□ -0.9
NUP88-205ENST00000572809 TNIP1Q15025 636 aa9.45□□□□□ -0.9
NUP88-205ENST00000572809 CIAPIN1Q6FI81 312 aa9.45□□□□□ -0.9
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