RNA–Protein interactions for RNA: ENST00000572369.5

SMG6-211, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 689 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-211ENST00000572369 PSME4Q14997 1843 aa9.68□□□□□ -0.86
SMG6-211ENST00000572369 LAMA3Q16787 3333 aa9.68□□□□□ -0.86
SMG6-211ENST00000572369 WTIPA6NIX2 430 aaPredicted RBP9.68□□□□□ -0.86
SMG6-211ENST00000572369 YDJCA8MPS7 323 aa9.68□□□□□ -0.86
SMG6-211ENST00000572369 PSMD14O00487 310 aa9.68□□□□□ -0.86
SMG6-211ENST00000572369 GMPSP49915 693 aaPredicted RBP9.68□□□□□ -0.86
SMG6-211ENST00000572369 LRRC24Q50LG9 513 aa9.68□□□□□ -0.86
SMG6-211ENST00000572369 ZNF804AQ7Z570 1209 aa9.68□□□□□ -0.86
SMG6-211ENST00000572369 PODNQ7Z5L7 613 aa9.68□□□□□ -0.86
SMG6-211ENST00000572369 KLHDC4Q8TBB5 520 aa9.68□□□□□ -0.86
SMG6-211ENST00000572369 PANK1Q8TE04 598 aa9.68□□□□□ -0.86
SMG6-211ENST00000572369 SNX27Q96L92 541 aa9.68□□□□□ -0.86
SMG6-211ENST00000572369 COA1Q9GZY4 146 aa9.68□□□□□ -0.86
SMG6-211ENST00000572369 SCN9AQ15858 1988 aa9.67□□□□□ -0.86
SMG6-211ENST00000572369 CENPFP49454 3210 aa9.67□□□□□ -0.86
SMG6-211ENST00000572369 AKAP11Q9UKA4 1901 aa9.67□□□□□ -0.86
SMG6-211ENST00000572369 USP17L3A6NCW0 530 aa9.67□□□□□ -0.86
SMG6-211ENST00000572369 USP17L4A6NCW7 530 aa9.67□□□□□ -0.86
SMG6-211ENST00000572369 FAM155AB1AL88 458 aaPredicted RBP9.67□□□□□ -0.86
SMG6-211ENST00000572369 H7C1D1 291 aa9.67□□□□□ -0.86
SMG6-211ENST00000572369 SNAP23O00161 211 aa9.67□□□□□ -0.86
SMG6-211ENST00000572369 SRGAP3O43295 1099 aa9.67□□□□□ -0.86
SMG6-211ENST00000572369 EPS15P42566 896 aa9.67□□□□□ -0.86
SMG6-211ENST00000572369 KIF23Q02241 960 aaPredicted RBP9.67□□□□□ -0.86
SMG6-211ENST00000572369 UBE4AQ14139 1066 aa9.67□□□□□ -0.86
SMG6-211ENST00000572369 USP17L1Q7RTZ2 530 aa9.67□□□□□ -0.86
SMG6-211ENST00000572369 TXNRD3Q86VQ6 643 aa9.67□□□□□ -0.86
SMG6-211ENST00000572369 VPS37DQ86XT2 251 aa9.67□□□□□ -0.86
SMG6-211ENST00000572369 PHF6Q8IWS0 365 aaKnown RBP eCLIP9.67□□□□□ -0.86
SMG6-211ENST00000572369 KCNQ5Q9NR82 932 aa9.67□□□□□ -0.86
SMG6-211ENST00000572369 RAPGEFL1Q9UHV5 662 aa9.67□□□□□ -0.86
SMG6-211ENST00000572369 ZBTB12Q9Y330 459 aaPredicted RBP9.67□□□□□ -0.86
SMG6-211ENST00000572369 EYA2O00167 538 aa9.66□□□□□ -0.86
SMG6-211ENST00000572369 FRAT2O75474 233 aaPredicted RBP9.66□□□□□ -0.86
SMG6-211ENST00000572369 PDE8BO95263 885 aa9.66□□□□□ -0.86
SMG6-211ENST00000572369 RLBP1P12271 317 aa9.66□□□□□ -0.86
SMG6-211ENST00000572369 KLRK1P26718 216 aa9.66□□□□□ -0.86
SMG6-211ENST00000572369 SCNN1DP51172 638 aa9.66□□□□□ -0.86
SMG6-211ENST00000572369 PTPN12Q05209 780 aaKnown RBP9.66□□□□□ -0.86
SMG6-211ENST00000572369 CAVIN4Q5BKX8 364 aa9.66□□□□□ -0.86
SMG6-211ENST00000572369 CHMP4BQ9H444 224 aaKnown RBP9.66□□□□□ -0.86
SMG6-211ENST00000572369 C1orf115Q9H7X2 142 aa9.66□□□□□ -0.86
SMG6-211ENST00000572369 ADARB2Q9NS39 739 aaKnown RBP9.66□□□□□ -0.86
SMG6-211ENST00000572369 GPRC5DQ9NZD1 345 aa9.66□□□□□ -0.86
SMG6-211ENST00000572369 CEP126Q9P2H0 1117 aa9.66□□□□□ -0.86
SMG6-211ENST00000572369 CNOT7Q9UIV1 285 aaKnown RBP9.66□□□□□ -0.86
SMG6-211ENST00000572369 PA2G4Q9UQ80 394 aaKnown RBP9.66□□□□□ -0.86
SMG6-211ENST00000572369 RIPOR2Q9Y4F9 1068 aa9.66□□□□□ -0.86
SMG6-211ENST00000572369 MYH13Q9UKX3 1938 aa9.66□□□□□ -0.86
SMG6-211ENST00000572369 VIL1P09327 827 aaKnown RBP9.65□□□□□ -0.86
SMG6-211ENST00000572369 IFIT1P09914 478 aaKnown RBP9.65□□□□□ -0.86
SMG6-211ENST00000572369 RPS12P25398 132 aaKnown RBP9.65□□□□□ -0.86
SMG6-211ENST00000572369 RFX5P48382 616 aaPredicted RBP9.65□□□□□ -0.86
SMG6-211ENST00000572369 HUNKP57058 714 aa9.65□□□□□ -0.86
SMG6-211ENST00000572369 GTF2IP78347 998 aa9.65□□□□□ -0.86
SMG6-211ENST00000572369 OS9Q13438 667 aaPredicted RBP9.65□□□□□ -0.86
SMG6-211ENST00000572369 MVPQ14764 893 aaKnown RBP9.65□□□□□ -0.86
SMG6-211ENST00000572369 RBM26Q5T8P6 1007 aaKnown RBP9.65□□□□□ -0.86
SMG6-211ENST00000572369 TTLL5Q6EMB2 1281 aa9.65□□□□□ -0.86
SMG6-211ENST00000572369 RSBN1LQ6PCB5 846 aaPredicted RBP9.65□□□□□ -0.86
SMG6-211ENST00000572369 USP50Q70EL3 339 aaPredicted RBP9.65□□□□□ -0.86
SMG6-211ENST00000572369 MICALL2Q8IY33 904 aa9.65□□□□□ -0.86
SMG6-211ENST00000572369 ZNF296Q8WUU4 475 aaPredicted RBP9.65□□□□□ -0.86
SMG6-211ENST00000572369 ZNF408Q9H9D4 720 aa9.65□□□□□ -0.86
SMG6-211ENST00000572369 CD209Q9NNX6 404 aa9.65□□□□□ -0.86
SMG6-211ENST00000572369 FBXO3Q9UK99 471 aa9.65□□□□□ -0.86
SMG6-211ENST00000572369 DDX19BQ9UMR2 479 aa9.65□□□□□ -0.86
SMG6-211ENST00000572369 STXBP5LQ9Y2K9 1186 aa9.65□□□□□ -0.86
SMG6-211ENST00000572369 COG6Q9Y2V7 657 aa9.65□□□□□ -0.86
SMG6-211ENST00000572369 ZBTB7BO15156 539 aaPredicted RBP9.64□□□□□ -0.87
SMG6-211ENST00000572369 CIAO1O76071 339 aa9.64□□□□□ -0.87
SMG6-211ENST00000572369 SLC5A1P13866 664 aa9.64□□□□□ -0.87
SMG6-211ENST00000572369 EN2P19622 333 aaPredicted RBP9.64□□□□□ -0.87
SMG6-211ENST00000572369 HIBADHP31937 336 aaKnown RBP9.64□□□□□ -0.87
SMG6-211ENST00000572369 IL15P40933 162 aaPredicted RBP9.64□□□□□ -0.87
SMG6-211ENST00000572369 GYG1P46976 350 aa9.64□□□□□ -0.87
SMG6-211ENST00000572369 G3BP1Q13283 466 aaKnown RBP eCLIP9.64□□□□□ -0.87
SMG6-211ENST00000572369 PUM3Q15397 648 aaKnown RBP9.64□□□□□ -0.87
SMG6-211ENST00000572369 C15orf52Q6ZUT6 534 aaKnown RBP9.64□□□□□ -0.87
SMG6-211ENST00000572369 AGBL3Q8NEM8 1001 aa9.64□□□□□ -0.87
SMG6-211ENST00000572369 DPF2Q92785 391 aa9.64□□□□□ -0.87
SMG6-211ENST00000572369 MYO3BQ8WXR4 1341 aa9.63□□□□□ -0.87
SMG6-211ENST00000572369 PNMA6EA0A0J9YXQ4 647 aa9.63□□□□□ -0.87
SMG6-211ENST00000572369 SOX1O00570 391 aaPredicted RBP9.63□□□□□ -0.87
SMG6-211ENST00000572369 MTX1Q13505 466 aa9.63□□□□□ -0.87
SMG6-211ENST00000572369 ATP2B3Q16720 1220 aa9.63□□□□□ -0.87
SMG6-211ENST00000572369 TBC1D10BQ4KMP7 808 aaPredicted RBP9.63□□□□□ -0.87
SMG6-211ENST00000572369 STRIP1Q5VSL9 837 aa9.63□□□□□ -0.87
SMG6-211ENST00000572369 RGMBQ6NW40 437 aa9.63□□□□□ -0.87
SMG6-211ENST00000572369 ATG9AQ7Z3C6 839 aa9.63□□□□□ -0.87
SMG6-211ENST00000572369 SAMD7Q7Z3H4 446 aa9.63□□□□□ -0.87
SMG6-211ENST00000572369 OGFOD1Q8N543 542 aa9.63□□□□□ -0.87
SMG6-211ENST00000572369 LRCH3Q96II8 777 aa9.63□□□□□ -0.87
SMG6-211ENST00000572369 GLIS2Q9BZE0 524 aaPredicted RBP9.63□□□□□ -0.87
SMG6-211ENST00000572369 COPRSQ9NQ92 184 aa9.63□□□□□ -0.87
SMG6-211ENST00000572369 SHTN1A0MZ66 631 aa9.62□□□□□ -0.87
SMG6-211ENST00000572369 USP17L8P0C7I0 530 aa9.62□□□□□ -0.87
SMG6-211ENST00000572369 IL1R1P14778 569 aa9.62□□□□□ -0.87
SMG6-211ENST00000572369 ATP8B2P98198 1209 aa9.62□□□□□ -0.87
SMG6-211ENST00000572369 PDE3AQ14432 1141 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms