RNA–Protein interactions for RNA: ENST00000571725.1

RPA1-204, Transcript of replication protein A1, humanhuman

TSL 5

Gene RPA1, Length 413 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA1-204ENST00000571725 PSAPP07602 524 aa4.93□□□□□ -1.62
RPA1-204ENST00000571725 MAP4P27816 1152 aaKnown RBP4.93□□□□□ -1.62
RPA1-204ENST00000571725 CFPP27918 469 aa4.93□□□□□ -1.62
RPA1-204ENST00000571725 CDC25BP30305 580 aa4.93□□□□□ -1.62
RPA1-204ENST00000571725 PREPP48147 710 aa4.93□□□□□ -1.62
RPA1-204ENST00000571725 TXNDC11Q6PKC3 985 aa4.93□□□□□ -1.62
RPA1-204ENST00000571725 KIAA1211Q6ZU35 1233 aa4.93□□□□□ -1.62
RPA1-204ENST00000571725 BHLHE22Q8NFJ8 381 aaPredicted RBP4.93□□□□□ -1.62
RPA1-204ENST00000571725 SCG3Q8WXD2 468 aaKnown RBP4.93□□□□□ -1.62
RPA1-204ENST00000571725 NSUN5Q96P11 429 aaKnown RBP4.93□□□□□ -1.62
RPA1-204ENST00000571725 TRIM33Q9UPN9 1127 aa4.93□□□□□ -1.62
RPA1-204ENST00000571725 TGFBR3LH3BV60 316 aa4.92□□□□□ -1.62
RPA1-204ENST00000571725 FAM13AO94988 1023 aa4.92□□□□□ -1.62
RPA1-204ENST00000571725 FKBP4Q02790 459 aaKnown RBP eCLIP4.92□□□□□ -1.62
RPA1-204ENST00000571725 ZNF792Q3KQV3 632 aa4.92□□□□□ -1.62
RPA1-204ENST00000571725 SIAH1Q8IUQ4 282 aa4.92□□□□□ -1.62
RPA1-204ENST00000571725 ZSCAN29Q8IWY8 852 aaPredicted RBP4.92□□□□□ -1.62
RPA1-204ENST00000571725 STAG2Q8N3U4 1231 aa4.92□□□□□ -1.62
RPA1-204ENST00000571725 KCNK4Q9NYG8 393 aa4.92□□□□□ -1.62
RPA1-204ENST00000571725 ATAD2Q6PL18 1390 aa4.91□□□□□ -1.62
RPA1-204ENST00000571725 FAM177BA6PVY3 158 aa4.91□□□□□ -1.62
RPA1-204ENST00000571725 H3BRB1 525 aa4.91□□□□□ -1.62
RPA1-204ENST00000571725 C21orf2O43822 256 aa4.91□□□□□ -1.62
RPA1-204ENST00000571725 ICMTO60725 284 aa4.91□□□□□ -1.62
RPA1-204ENST00000571725 SERPINB4P48594 390 aa4.91□□□□□ -1.62
RPA1-204ENST00000571725 NFKBIBQ15653 356 aa4.91□□□□□ -1.62
RPA1-204ENST00000571725 LCNL1Q6ZST4 164 aa4.91□□□□□ -1.62
RPA1-204ENST00000571725 TTLL10Q6ZVT0 673 aa4.91□□□□□ -1.62
RPA1-204ENST00000571725 ATG4DQ86TL0 474 aaPredicted RBP4.91□□□□□ -1.62
RPA1-204ENST00000571725 ANKLE2Q86XL3 938 aa4.91□□□□□ -1.62
RPA1-204ENST00000571725 GTF3C2Q8WUA4 911 aaPredicted RBP4.91□□□□□ -1.62
RPA1-204ENST00000571725 CARD10Q9BWT7 1032 aa4.91□□□□□ -1.62
RPA1-204ENST00000571725 TUT1Q9H6E5 874 aaKnown RBP4.91□□□□□ -1.62
RPA1-204ENST00000571725 TLR7Q9NYK1 1049 aaKnown RBP4.91□□□□□ -1.62
RPA1-204ENST00000571725 RAPGEFL1Q9UHV5 662 aa4.91□□□□□ -1.62
RPA1-204ENST00000571725 LRRC10BA6NIK2 292 aa4.9□□□□□ -1.63
RPA1-204ENST00000571725 E9PSI1 815 aa4.9□□□□□ -1.63
RPA1-204ENST00000571725 ITGAEP38570 1179 aa4.9□□□□□ -1.63
RPA1-204ENST00000571725 IDH3AP50213 366 aa4.9□□□□□ -1.63
RPA1-204ENST00000571725 CTSWP56202 376 aa4.9□□□□□ -1.63
RPA1-204ENST00000571725 FGD1P98174 961 aa4.9□□□□□ -1.63
RPA1-204ENST00000571725 ECM1Q16610 540 aa4.9□□□□□ -1.63
RPA1-204ENST00000571725 ALKBH2Q6NS38 261 aa4.9□□□□□ -1.63
RPA1-204ENST00000571725 PAOXQ6QHF9 649 aa4.9□□□□□ -1.63
RPA1-204ENST00000571725 KLHL23Q8NBE8 558 aa4.9□□□□□ -1.63
RPA1-204ENST00000571725 HELQQ8TDG4 1101 aa4.9□□□□□ -1.63
RPA1-204ENST00000571725 UBASH3BQ8TF42 649 aa4.9□□□□□ -1.63
RPA1-204ENST00000571725 CHMP7Q8WUX9 453 aaPredicted RBP4.9□□□□□ -1.63
RPA1-204ENST00000571725 MKNK1Q9BUB5 465 aa4.9□□□□□ -1.63
RPA1-204ENST00000571725 RNF208Q9H0X6 261 aa4.9□□□□□ -1.63
RPA1-204ENST00000571725 SLAIN2Q9P270 581 aa4.9□□□□□ -1.63
RPA1-204ENST00000571725 SLC5A6Q9Y289 635 aa4.9□□□□□ -1.63
RPA1-204ENST00000571725 PSPNO60542 156 aa4.89□□□□□ -1.63
RPA1-204ENST00000571725 FKBP5Q13451 457 aaPredicted RBP4.89□□□□□ -1.63
RPA1-204ENST00000571725 SGO2Q562F6 1265 aa4.89□□□□□ -1.63
RPA1-204ENST00000571725 C16orf46Q6P387 395 aa4.89□□□□□ -1.63
RPA1-204ENST00000571725 PPP1R16BQ96T49 567 aa4.89□□□□□ -1.63
RPA1-204ENST00000571725 LACRTQ9GZZ8 138 aa4.89□□□□□ -1.63
RPA1-204ENST00000571725 RC3H2Q9HBD1 1191 aaKnown RBP4.89□□□□□ -1.63
RPA1-204ENST00000571725 LRRC4CQ9HCJ2 640 aa4.89□□□□□ -1.63
RPA1-204ENST00000571725 FSCN2O14926 492 aa4.88□□□□□ -1.63
RPA1-204ENST00000571725 NDUFB5O43674 189 aa4.88□□□□□ -1.63
RPA1-204ENST00000571725 CDC27P30260 824 aa4.88□□□□□ -1.63
RPA1-204ENST00000571725 ARSDP51689 593 aa4.88□□□□□ -1.63
RPA1-204ENST00000571725 AAMPQ13685 434 aa4.88□□□□□ -1.63
RPA1-204ENST00000571725 DBX2Q6ZNG2 339 aa4.88□□□□□ -1.63
RPA1-204ENST00000571725 ABTB2Q8N961 1025 aa4.88□□□□□ -1.63
RPA1-204ENST00000571725 TBC1D32Q96NH3 1257 aa4.88□□□□□ -1.63
RPA1-204ENST00000571725 C11orf16Q9NQ32 467 aa4.88□□□□□ -1.63
RPA1-204ENST00000571725 DCTN4Q9UJW0 460 aa4.88□□□□□ -1.63
RPA1-204ENST00000571725 FAM95CA0A1B0GW59 222 aa4.87□□□□□ -1.63
RPA1-204ENST00000571725 DDX3YO15523 660 aaKnown RBP4.87□□□□□ -1.63
RPA1-204ENST00000571725 PCSK2P16519 638 aa4.87□□□□□ -1.63
RPA1-204ENST00000571725 MAPK1P28482 360 aa4.87□□□□□ -1.63
RPA1-204ENST00000571725 INPP5BP32019 993 aa4.87□□□□□ -1.63
RPA1-204ENST00000571725 RBM25P49756 843 aaKnown RBP4.87□□□□□ -1.63
RPA1-204ENST00000571725 ZNF211Q13398 564 aaPredicted RBP4.87□□□□□ -1.63
RPA1-204ENST00000571725 NAA30Q147X3 362 aaPredicted RBP4.87□□□□□ -1.63
RPA1-204ENST00000571725 ZNF326Q5BKZ1 582 aaKnown RBP4.87□□□□□ -1.63
RPA1-204ENST00000571725 DUSP27Q5VZP5 1158 aa4.87□□□□□ -1.63
RPA1-204ENST00000571725 POTEAQ6S8J7 498 aa4.87□□□□□ -1.63
RPA1-204ENST00000571725 TTC16Q8NEE8 873 aa4.87□□□□□ -1.63
RPA1-204ENST00000571725 FOXD4L4Q8WXT5 416 aaPredicted RBP4.87□□□□□ -1.63
RPA1-204ENST00000571725 CITED4Q96RK1 184 aa4.87□□□□□ -1.63
RPA1-204ENST00000571725 C2orf49Q9BVC5 232 aaPredicted RBP4.87□□□□□ -1.63
RPA1-204ENST00000571725 RUSC1Q9BVN2 902 aa4.87□□□□□ -1.63
RPA1-204ENST00000571725 STIM2Q9P246 746 aa4.87□□□□□ -1.63
RPA1-204ENST00000571725 BRPF3Q9ULD4 1205 aa4.87□□□□□ -1.63
RPA1-204ENST00000571725 LGR5O75473 907 aa4.86□□□□□ -1.63
RPA1-204ENST00000571725 INHBBP09529 407 aa4.86□□□□□ -1.63
RPA1-204ENST00000571725 BRD2P25440 801 aaKnown RBP4.86□□□□□ -1.63
RPA1-204ENST00000571725 USP5P45974 858 aa4.86□□□□□ -1.63
RPA1-204ENST00000571725 USP11P51784 963 aa4.86□□□□□ -1.63
RPA1-204ENST00000571725 MESP2Q0VG99 397 aa4.86□□□□□ -1.63
RPA1-204ENST00000571725 PDE3BQ13370 1112 aa4.86□□□□□ -1.63
RPA1-204ENST00000571725 FAM53CQ9NYF3 392 aa4.86□□□□□ -1.63
RPA1-204ENST00000571725 FAM13BQ9NYF5 915 aa4.86□□□□□ -1.63
RPA1-204ENST00000571725 SEPT3Q9UH03 358 aa4.86□□□□□ -1.63
RPA1-204ENST00000571725 RBM47A0AV96 593 aaKnown RBP4.85□□□□□ -1.63
RPA1-204ENST00000571725 SMNDC1O75940 238 aaKnown RBP eCLIP4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms