RNA–Protein interactions for RNA: ENST00000570902.1

SCARF1-204, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 1,060 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-204ENST00000570902 ZEB1P37275 1124 aaPredicted RBP24.2■■□□□ 1.46
SCARF1-204ENST00000570902 ZNF804AQ7Z570 1209 aa24.2■■□□□ 1.46
SCARF1-204ENST00000570902 R3HDMLQ9H3Y0 253 aa24.2■■□□□ 1.46
SCARF1-204ENST00000570902 FKBP1AP62942 108 aaKnown RBP24.19■■□□□ 1.46
SCARF1-204ENST00000570902 IFIT5Q13325 482 aaKnown RBP24.19■■□□□ 1.46
SCARF1-204ENST00000570902 SUPT20HL1Q3ZLR7 823 aa24.19■■□□□ 1.46
SCARF1-204ENST00000570902 IFNL1Q8IU54 200 aa24.19■■□□□ 1.46
SCARF1-204ENST00000570902 CERS5Q8N5B7 392 aa24.19■■□□□ 1.46
SCARF1-204ENST00000570902 IRS2Q9Y4H2 1338 aa24.18■■□□□ 1.46
SCARF1-204ENST00000570902 TAF5LO75529 589 aa24.18■■□□□ 1.46
SCARF1-204ENST00000570902 IL1R1P14778 569 aa24.18■■□□□ 1.46
SCARF1-204ENST00000570902 WNK4Q96J92 1243 aa24.18■■□□□ 1.46
SCARF1-204ENST00000570902 FZD1Q9UP38 647 aa24.18■■□□□ 1.46
SCARF1-204ENST00000570902 CFAP100Q494V2 611 aa24.17■■□□□ 1.46
SCARF1-204ENST00000570902 NCBP3Q53F19 620 aaKnown RBP24.17■■□□□ 1.46
SCARF1-204ENST00000570902 ECM29Q5VYK3 1845 aa24.17■■□□□ 1.46
SCARF1-204ENST00000570902 SPDYE2BA6NHP3 402 aa24.16■■□□□ 1.46
SCARF1-204ENST00000570902 F8W031 263 aaPredicted RBP24.16■■□□□ 1.46
SCARF1-204ENST00000570902 SPDYE6P0CI01 402 aa24.16■■□□□ 1.46
SCARF1-204ENST00000570902 HELBQ8NG08 1087 aaPredicted RBP24.16■■□□□ 1.46
SCARF1-204ENST00000570902 CHMP3Q9Y3E7 222 aa24.16■■□□□ 1.46
SCARF1-204ENST00000570902 SSC5DA1L4H1 1573 aa24.16■■□□□ 1.46
SCARF1-204ENST00000570902 SNAP23O00161 211 aa24.15■■□□□ 1.46
SCARF1-204ENST00000570902 IREB2P48200 963 aaKnown RBP24.15■■□□□ 1.46
SCARF1-204ENST00000570902 OTUD7BQ6GQQ9 843 aa24.15■■□□□ 1.46
SCARF1-204ENST00000570902 CLMNQ96JQ2 1002 aa24.15■■□□□ 1.46
SCARF1-204ENST00000570902 VEZTQ9HBM0 779 aa24.15■■□□□ 1.46
SCARF1-204ENST00000570902 ZBTB4Q9P1Z0 1013 aaPredicted RBP24.15■■□□□ 1.46
SCARF1-204ENST00000570902 TRIM17Q9Y577 477 aa24.15■■□□□ 1.46
SCARF1-204ENST00000570902 CACNA1FO60840 1977 aa24.14■■□□□ 1.46
SCARF1-204ENST00000570902 CLRN2A0PK11 232 aa24.14■■□□□ 1.45
SCARF1-204ENST00000570902 FOXO4P98177 505 aa24.14■■□□□ 1.45
SCARF1-204ENST00000570902 INTS3Q68E01 1043 aaKnown RBP24.14■■□□□ 1.45
SCARF1-204ENST00000570902 PRMT6Q96LA8 375 aaPredicted RBP24.14■■□□□ 1.45
SCARF1-204ENST00000570902 LAMB1P07942 1786 aa24.14■■□□□ 1.45
SCARF1-204ENST00000570902 FANCIQ9NVI1 1328 aa24.13■■□□□ 1.45
SCARF1-204ENST00000570902 IGF2BP3O00425 579 aaKnown RBP eCLIP24.13■■□□□ 1.45
SCARF1-204ENST00000570902 ERO1AQ96HE7 468 aa24.13■■□□□ 1.45
SCARF1-204ENST00000570902 PCDHAC2Q9Y5I4 1007 aa24.13■■□□□ 1.45
SCARF1-204ENST00000570902 A0A1B0GUL6 1792 aa24.13■■□□□ 1.45
SCARF1-204ENST00000570902 RBM5P52756 815 aaKnown RBP eCLIP24.12■■□□□ 1.45
SCARF1-204ENST00000570902 TAF7LQ5H9L4 462 aa24.12■■□□□ 1.45
SCARF1-204ENST00000570902 OTOP1Q7RTM1 612 aa24.12■■□□□ 1.45
SCARF1-204ENST00000570902 VAMP4O75379 141 aa24.11■■□□□ 1.45
SCARF1-204ENST00000570902 TNFAIP1Q13829 316 aa24.11■■□□□ 1.45
SCARF1-204ENST00000570902 CCDC57Q2TAC2 916 aa24.11■■□□□ 1.45
SCARF1-204ENST00000570902 NBPF12Q5TAG4 269 aaPredicted RBP24.11■■□□□ 1.45
SCARF1-204ENST00000570902 ANKRD13AQ8IZ07 590 aa24.11■■□□□ 1.45
SCARF1-204ENST00000570902 GCC1Q96CN9 775 aa24.11■■□□□ 1.45
SCARF1-204ENST00000570902 RASA3Q14644 834 aa24.1■■□□□ 1.45
SCARF1-204ENST00000570902 BEND3Q5T5X7 828 aa24.1■■□□□ 1.45
SCARF1-204ENST00000570902 LMBR1LQ6UX01 489 aa24.1■■□□□ 1.45
SCARF1-204ENST00000570902 LDHAL6AQ6ZMR3 332 aa24.1■■□□□ 1.45
SCARF1-204ENST00000570902 CNNM1Q9NRU3 951 aa24.1■■□□□ 1.45
SCARF1-204ENST00000570902 USP2O75604 605 aaPredicted RBP24.09■■□□□ 1.45
SCARF1-204ENST00000570902 JAG2Q9Y219 1238 aa24.09■■□□□ 1.45
SCARF1-204ENST00000570902 PLIN1O60240 522 aa24.08■■□□□ 1.45
SCARF1-204ENST00000570902 CRHR2Q13324 411 aa24.08■■□□□ 1.45
SCARF1-204ENST00000570902 CCDC184Q52MB2 194 aa24.08■■□□□ 1.45
SCARF1-204ENST00000570902 WDR63Q8IWG1 891 aa24.08■■□□□ 1.45
SCARF1-204ENST00000570902 FAM205AQ6ZU69 1335 aa24.08■■□□□ 1.44
SCARF1-204ENST00000570902 TESPA1A2RU30 521 aaPredicted RBP24.07■■□□□ 1.44
SCARF1-204ENST00000570902 F6X3S4 739 aa24.07■■□□□ 1.44
SCARF1-204ENST00000570902 SERPINA10Q9UK55 444 aa24.07■■□□□ 1.44
SCARF1-204ENST00000570902 PTPN22Q9Y2R2 807 aa24.07■■□□□ 1.44
SCARF1-204ENST00000570902 GRM8O00222 908 aa24.06■■□□□ 1.44
SCARF1-204ENST00000570902 GJA5P36382 358 aa24.06■■□□□ 1.44
SCARF1-204ENST00000570902 EXOSC9Q06265 439 aaKnown RBP24.06■■□□□ 1.44
SCARF1-204ENST00000570902 SPDYE2Q495Y8 402 aa24.06■■□□□ 1.44
SCARF1-204ENST00000570902 MFSD14BQ5SR56 506 aa24.06■■□□□ 1.44
SCARF1-204ENST00000570902 ZNF594Q96JF6 807 aaPredicted RBP24.06■■□□□ 1.44
SCARF1-204ENST00000570902 AOX1Q06278 1338 aa24.06■■□□□ 1.44
SCARF1-204ENST00000570902 HTTP42858 3142 aa24.05■■□□□ 1.44
SCARF1-204ENST00000570902 SP3Q02447 781 aa24.05■■□□□ 1.44
SCARF1-204ENST00000570902 UBE4AQ14139 1066 aa24.05■■□□□ 1.44
SCARF1-204ENST00000570902 EPHA10Q5JZY3 1008 aa24.05■■□□□ 1.44
SCARF1-204ENST00000570902 TDRD7Q8NHU6 1098 aaKnown RBP24.05■■□□□ 1.44
SCARF1-204ENST00000570902 CD99L2Q8TCZ2 262 aa24.05■■□□□ 1.44
SCARF1-204ENST00000570902 EFCC1Q9HA90 598 aa24.05■■□□□ 1.44
SCARF1-204ENST00000570902 ZNF70Q9UC06 446 aaPredicted RBP24.05■■□□□ 1.44
SCARF1-204ENST00000570902 TTF2Q9UNY4 1162 aaKnown RBP24.05■■□□□ 1.44
SCARF1-204ENST00000570902 HIBADHP31937 336 aaKnown RBP24.04■■□□□ 1.44
SCARF1-204ENST00000570902 OPTNQ96CV9 577 aa24.04■■□□□ 1.44
SCARF1-204ENST00000570902 PTPN18Q99952 460 aa24.04■■□□□ 1.44
SCARF1-204ENST00000570902 C9orf78Q9NZ63 289 aaPredicted RBP24.04■■□□□ 1.44
SCARF1-204ENST00000570902 POTEFA5A3E0 1075 aa24.03■■□□□ 1.44
SCARF1-204ENST00000570902 ARMC5Q96C12 935 aa24.03■■□□□ 1.44
SCARF1-204ENST00000570902 ELP3Q9H9T3 547 aa24.03■■□□□ 1.44
SCARF1-204ENST00000570902 TNNI2P48788 182 aa24.02■■□□□ 1.44
SCARF1-204ENST00000570902 ARHGEF6Q15052 776 aa24.02■■□□□ 1.44
SCARF1-204ENST00000570902 TDRD3Q9H7E2 651 aaKnown RBP24.02■■□□□ 1.44
SCARF1-204ENST00000570902 RBBP6Q7Z6E9 1792 aaKnown RBP24.01■■□□□ 1.43
SCARF1-204ENST00000570902 ALDH1L1O75891 902 aa24.01■■□□□ 1.43
SCARF1-204ENST00000570902 GYG1P46976 350 aa24.01■■□□□ 1.43
SCARF1-204ENST00000570902 DZIP1LQ8IYY4 767 aaKnown RBP24.01■■□□□ 1.43
SCARF1-204ENST00000570902 OTOFQ9HC10 1997 aa24.01■■□□□ 1.43
SCARF1-204ENST00000570902 MS4A4AQ96JQ5 239 aa24■■□□□ 1.43
SCARF1-204ENST00000570902 FAM84BQ96KN1 310 aaPredicted RBP24■■□□□ 1.43
SCARF1-204ENST00000570902 TEPSINQ96N21 525 aa24■■□□□ 1.43
SCARF1-204ENST00000570902 SALL2Q9Y467 1007 aaPredicted RBP24■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms