RNA–Protein interactions for RNA: ENST00000570475.5

USP43-202, Transcript of ubiquitin specific peptidase 43, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USP43, Length 3,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP43-202ENST00000570475 FGAP02671 866 aa17.76■□□□□ 0.43
USP43-202ENST00000570475 XAGE2Q96GT9 111 aa17.76■□□□□ 0.43
USP43-202ENST00000570475 RCOR1Q9UKL0 485 aa17.76■□□□□ 0.43
USP43-202ENST00000570475 DIP2AQ14689 1571 aa17.76■□□□□ 0.43
USP43-202ENST00000570475 ERBB3P21860 1342 aa17.76■□□□□ 0.43
USP43-202ENST00000570475 PES1O00541 588 aaKnown RBP17.76■□□□□ 0.43
USP43-202ENST00000570475 NCOA7Q8NI08 942 aa17.76■□□□□ 0.43
USP43-202ENST00000570475 DCAF5Q96JK2 942 aa17.76■□□□□ 0.43
USP43-202ENST00000570475 INCENPQ9NQS7 918 aa17.76■□□□□ 0.43
USP43-202ENST00000570475 MED23Q9ULK4 1368 aa17.76■□□□□ 0.43
USP43-202ENST00000570475 POLR3GO15318 223 aaPredicted RBP17.76■□□□□ 0.43
USP43-202ENST00000570475 METAP2P50579 478 aaKnown RBP eCLIP17.76■□□□□ 0.43
USP43-202ENST00000570475 CMTR1Q8N1G2 835 aaKnown RBP17.76■□□□□ 0.43
USP43-202ENST00000570475 CLIC6Q96NY7 704 aa17.76■□□□□ 0.43
USP43-202ENST00000570475 COL15A1P39059 1388 aa17.75■□□□□ 0.43
USP43-202ENST00000570475 B4E1Z4 1266 aa17.75■□□□□ 0.43
USP43-202ENST00000570475 UBASH3AP57075 661 aa17.75■□□□□ 0.43
USP43-202ENST00000570475 NAA16Q6N069 864 aaPredicted RBP17.75■□□□□ 0.43
USP43-202ENST00000570475 SLC26A6Q9BXS9 759 aa17.75■□□□□ 0.43
USP43-202ENST00000570475 MTMR7Q9Y216 660 aa17.75■□□□□ 0.43
USP43-202ENST00000570475 ERCC6LQ2NKX8 1250 aa17.75■□□□□ 0.43
USP43-202ENST00000570475 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.75■□□□□ 0.43
USP43-202ENST00000570475 KCNB2Q92953 911 aa17.75■□□□□ 0.43
USP43-202ENST00000570475 DENND2AQ9ULE3 1009 aa17.75■□□□□ 0.43
USP43-202ENST00000570475 AGLP35573 1532 aa17.75■□□□□ 0.43
USP43-202ENST00000570475 ATP1A3P13637 1013 aa17.75■□□□□ 0.43
USP43-202ENST00000570475 HELLSQ9NRZ9 838 aa17.75■□□□□ 0.43
USP43-202ENST00000570475 IQCB1Q15051 598 aa17.74■□□□□ 0.43
USP43-202ENST00000570475 CNNM3Q8NE01 707 aa17.74■□□□□ 0.43
USP43-202ENST00000570475 UTP14AQ9BVJ6 771 aaKnown RBP17.74■□□□□ 0.43
USP43-202ENST00000570475 PXDNLA1KZ92 1463 aa17.74■□□□□ 0.43
USP43-202ENST00000570475 LLPHQ9BRT6 129 aaKnown RBP17.74■□□□□ 0.43
USP43-202ENST00000570475 PUS7LQ9H0K6 701 aaKnown RBP17.74■□□□□ 0.43
USP43-202ENST00000570475 KIAA1468Q9P260 1216 aa17.74■□□□□ 0.43
USP43-202ENST00000570475 GPAA1O43292 621 aa17.73■□□□□ 0.43
USP43-202ENST00000570475 CAVIN2O95810 425 aa17.73■□□□□ 0.43
USP43-202ENST00000570475 AIDAQ96BJ3 306 aa17.73■□□□□ 0.43
USP43-202ENST00000570475 PNOCQ13519 176 aa17.73■□□□□ 0.43
USP43-202ENST00000570475 SCARF1Q14162 830 aa17.73■□□□□ 0.43
USP43-202ENST00000570475 IL17RAQ96F46 866 aa17.73■□□□□ 0.43
USP43-202ENST00000570475 CARMIL3Q8ND23 1372 aa17.73■□□□□ 0.43
USP43-202ENST00000570475 NPHP4O75161 1426 aaPredicted RBP17.73■□□□□ 0.43
USP43-202ENST00000570475 RFX5P48382 616 aaPredicted RBP17.73■□□□□ 0.43
USP43-202ENST00000570475 MYSM1Q5VVJ2 828 aa17.73■□□□□ 0.43
USP43-202ENST00000570475 KIF6Q6ZMV9 814 aa17.73■□□□□ 0.43
USP43-202ENST00000570475 KCNG4Q8TDN1 519 aa17.73■□□□□ 0.43
USP43-202ENST00000570475 UBXN4Q92575 508 aa17.73■□□□□ 0.43
USP43-202ENST00000570475 TOP1P11387 765 aaKnown RBP17.72■□□□□ 0.43
USP43-202ENST00000570475 ZSCAN20P17040 1043 aaPredicted RBP17.72■□□□□ 0.43
USP43-202ENST00000570475 ZMYM1Q5SVZ6 1142 aa17.72■□□□□ 0.43
USP43-202ENST00000570475 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.72■□□□□ 0.43
USP43-202ENST00000570475 GOLGA8AA7E2F4 631 aa17.72■□□□□ 0.43
USP43-202ENST00000570475 SNAP23O00161 211 aa17.72■□□□□ 0.43
USP43-202ENST00000570475 IFIT3O14879 490 aaKnown RBP17.72■□□□□ 0.43
USP43-202ENST00000570475 SLU7O95391 586 aaKnown RBP17.72■□□□□ 0.43
USP43-202ENST00000570475 PFKFB1P16118 471 aa17.72■□□□□ 0.43
USP43-202ENST00000570475 ANO1Q5XXA6 986 aa17.72■□□□□ 0.43
USP43-202ENST00000570475 TBC1D2BQ9UPU7 963 aa17.72■□□□□ 0.43
USP43-202ENST00000570475 NEMFO60524 1076 aa17.72■□□□□ 0.43
USP43-202ENST00000570475 SAFBQ15424 915 aaKnown RBP eCLIP17.72■□□□□ 0.43
USP43-202ENST00000570475 TMEM67Q5HYA8 995 aa17.72■□□□□ 0.43
USP43-202ENST00000570475 IARSP41252 1262 aaKnown RBP17.71■□□□□ 0.43
USP43-202ENST00000570475 GSDMDP57764 484 aa17.71■□□□□ 0.43
USP43-202ENST00000570475 ZNF827Q17R98 1081 aa17.71■□□□□ 0.43
USP43-202ENST00000570475 DSCC1Q9BVC3 393 aa17.71■□□□□ 0.43
USP43-202ENST00000570475 NBPF26B4DH59 902 aa17.71■□□□□ 0.43
USP43-202ENST00000570475 NBPF14Q5TI25 921 aa17.71■□□□□ 0.43
USP43-202ENST00000570475 ADALQ6DHV7 355 aa17.71■□□□□ 0.43
USP43-202ENST00000570475 NBPF10Q6P3W6 841 aaKnown RBP17.71■□□□□ 0.43
USP43-202ENST00000570475 DHX40Q8IX18 779 aaKnown RBP17.71■□□□□ 0.43
USP43-202ENST00000570475 NBPF15Q8N660 670 aa17.71■□□□□ 0.43
USP43-202ENST00000570475 MINDY4BA8MYZ0 360 aa17.71■□□□□ 0.42
USP43-202ENST00000570475 GTF2F1P35269 517 aaKnown RBP eCLIP17.71■□□□□ 0.42
USP43-202ENST00000570475 FANCCQ00597 558 aa17.71■□□□□ 0.42
USP43-202ENST00000570475 DMTNQ08495 405 aa17.71■□□□□ 0.42
USP43-202ENST00000570475 ARHGAP29Q52LW3 1261 aa17.71■□□□□ 0.42
USP43-202ENST00000570475 USPL1Q5W0Q7 1092 aa17.71■□□□□ 0.42
USP43-202ENST00000570475 MRFAP1L1Q96HT8 127 aa17.71■□□□□ 0.42
USP43-202ENST00000570475 hCG_1642624A0A1W2PR95 340 aa17.7■□□□□ 0.42
USP43-202ENST00000570475 TEX35Q5T0J7 233 aa17.7■□□□□ 0.42
USP43-202ENST00000570475 TRMT44Q8IYL2 757 aaKnown RBP17.7■□□□□ 0.42
USP43-202ENST00000570475 LINC00301Q8NCQ3 95 aa17.7■□□□□ 0.42
USP43-202ENST00000570475 AKAP2Q9Y2D5 859 aa17.7■□□□□ 0.42
USP43-202ENST00000570475 TDO2P48775 406 aa17.7■□□□□ 0.42
USP43-202ENST00000570475 AKAP17AQ02040 695 aaKnown RBP17.7■□□□□ 0.42
USP43-202ENST00000570475 SLC4A8Q2Y0W8 1093 aa17.7■□□□□ 0.42
USP43-202ENST00000570475 ATG9AQ7Z3C6 839 aa17.7■□□□□ 0.42
USP43-202ENST00000570475 JMYQ8N9B5 988 aa17.7■□□□□ 0.42
USP43-202ENST00000570475 ZCRB1Q8TBF4 217 aaKnown RBP17.7■□□□□ 0.42
USP43-202ENST00000570475 OGFRQ9NZT2 677 aa17.7■□□□□ 0.42
USP43-202ENST00000570475 ABCF2Q9UG63 623 aa17.7■□□□□ 0.42
USP43-202ENST00000570475 TRMT112Q9UI30 125 aaKnown RBP17.7■□□□□ 0.42
USP43-202ENST00000570475 FBXO18Q8NFZ0 1043 aa17.69■□□□□ 0.42
USP43-202ENST00000570475 ST7Q9NRC1 585 aa17.69■□□□□ 0.42
USP43-202ENST00000570475 RGPD8O14715 1765 aaPredicted RBP17.69■□□□□ 0.42
USP43-202ENST00000570475 FDPSP14324 419 aaKnown RBP17.69■□□□□ 0.42
USP43-202ENST00000570475 SMARCC2Q8TAQ2 1214 aa17.69■□□□□ 0.42
USP43-202ENST00000570475 NAPBQ9H115 298 aa17.69■□□□□ 0.42
USP43-202ENST00000570475 KCNJ14Q9UNX9 436 aa17.69■□□□□ 0.42
USP43-202ENST00000570475 UBE2Q2LH0YL09 131 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms