RNA–Protein interactions for RNA: ENST00000570177.6

TCF4-245, Transcript of transcription factor 4, humanhuman

TSL 2 BASIC

Gene TCF4, Length 1,872 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-245ENST00000570177 NEK4P51957 841 aa11.79□□□□□ -0.52
TCF4-245ENST00000570177 UBE4AQ14139 1066 aa11.79□□□□□ -0.52
TCF4-245ENST00000570177 CREB3L3Q68CJ9 461 aa11.79□□□□□ -0.52
TCF4-245ENST00000570177 PRPF40BQ6NWY9 871 aaKnown RBP11.79□□□□□ -0.52
TCF4-245ENST00000570177 RGS22Q8NE09 1264 aa11.79□□□□□ -0.52
TCF4-245ENST00000570177 UPF3BQ9BZI7 483 aaKnown RBP11.79□□□□□ -0.52
TCF4-245ENST00000570177 SLKQ9H2G2 1235 aaPredicted RBP11.79□□□□□ -0.52
TCF4-245ENST00000570177 PNPLA7Q6ZV29 1317 aa11.78□□□□□ -0.52
TCF4-245ENST00000570177 M0R2C6 588 aa11.78□□□□□ -0.52
TCF4-245ENST00000570177 CLGNO14967 610 aa11.78□□□□□ -0.52
TCF4-245ENST00000570177 UQCRFS1P1P0C7P4 283 aa11.78□□□□□ -0.52
TCF4-245ENST00000570177 KLRK1P26718 216 aa11.78□□□□□ -0.52
TCF4-245ENST00000570177 TSGA10IPQ3SY00 556 aa11.78□□□□□ -0.52
TCF4-245ENST00000570177 VPS53Q5VIR6 699 aa11.78□□□□□ -0.52
TCF4-245ENST00000570177 TFCP2L1Q9NZI6 479 aa11.78□□□□□ -0.52
TCF4-245ENST00000570177 TCRBV5S4A2TA0A5A2 114 aa11.78□□□□□ -0.52
TCF4-245ENST00000570177 TAF3Q5VWG9 929 aa11.78□□□□□ -0.52
TCF4-245ENST00000570177 FAM84BQ96KN1 310 aaPredicted RBP11.78□□□□□ -0.52
TCF4-245ENST00000570177 ZNF830Q96NB3 372 aaPredicted RBP11.78□□□□□ -0.52
TCF4-245ENST00000570177 RGPD3A6NKT7 1758 aaPredicted RBP11.78□□□□□ -0.52
TCF4-245ENST00000570177 RGPD4Q7Z3J3 1758 aa11.78□□□□□ -0.52
TCF4-245ENST00000570177 CPA1P15085 419 aa11.77□□□□□ -0.53
TCF4-245ENST00000570177 HMGB2P26583 209 aaKnown RBP11.77□□□□□ -0.53
TCF4-245ENST00000570177 ADD2P35612 726 aa11.77□□□□□ -0.53
TCF4-245ENST00000570177 EZH2Q15910 746 aaKnown RBP11.77□□□□□ -0.53
TCF4-245ENST00000570177 GRIPAP1Q4V328 841 aa11.77□□□□□ -0.53
TCF4-245ENST00000570177 FBXO33Q7Z6M2 555 aa11.77□□□□□ -0.53
TCF4-245ENST00000570177 SPATA5Q8NB90 893 aa11.77□□□□□ -0.53
TCF4-245ENST00000570177 TM6SF1Q9BZW5 370 aa11.77□□□□□ -0.53
TCF4-245ENST00000570177 PUS7LQ9H0K6 701 aaKnown RBP11.77□□□□□ -0.53
TCF4-245ENST00000570177 ZSWIM6Q9HCJ5 1215 aa11.77□□□□□ -0.53
TCF4-245ENST00000570177 MYO5AQ9Y4I1 1855 aaKnown RBP11.77□□□□□ -0.53
TCF4-245ENST00000570177 COL1A1P02452 1464 aaPredicted RBP11.77□□□□□ -0.53
TCF4-245ENST00000570177 RPAP1Q9BWH6 1393 aaPredicted RBP11.77□□□□□ -0.53
TCF4-245ENST00000570177 A0A0G2JLW4 131 aa11.76□□□□□ -0.53
TCF4-245ENST00000570177 HOXA10P31260 410 aaPredicted RBP11.76□□□□□ -0.53
TCF4-245ENST00000570177 GYG1P46976 350 aa11.76□□□□□ -0.53
TCF4-245ENST00000570177 GRAPQ13588 217 aa11.76□□□□□ -0.53
TCF4-245ENST00000570177 GRAPLQ8TC17 118 aaPredicted RBP11.76□□□□□ -0.53
TCF4-245ENST00000570177 ST18O60284 1047 aa11.76□□□□□ -0.53
TCF4-245ENST00000570177 ZFYP08048 801 aaPredicted RBP11.76□□□□□ -0.53
TCF4-245ENST00000570177 HSPD1P10809 573 aaKnown RBP11.76□□□□□ -0.53
TCF4-245ENST00000570177 EN1Q05925 392 aaPredicted RBP11.76□□□□□ -0.53
TCF4-245ENST00000570177 CUL4AQ13619 759 aa11.76□□□□□ -0.53
TCF4-245ENST00000570177 TXNRD3Q86VQ6 643 aa11.76□□□□□ -0.53
TCF4-245ENST00000570177 APPBP2Q92624 585 aa11.76□□□□□ -0.53
TCF4-245ENST00000570177 TMX3Q96JJ7 454 aa11.76□□□□□ -0.53
TCF4-245ENST00000570177 DSCC1Q9BVC3 393 aa11.76□□□□□ -0.53
TCF4-245ENST00000570177 WWC3Q9ULE0 1092 aa11.76□□□□□ -0.53
TCF4-245ENST00000570177 NRXN2Q9P2S2 1712 aa11.76□□□□□ -0.53
TCF4-245ENST00000570177 CYP21A2P08686 494 aa11.75□□□□□ -0.53
TCF4-245ENST00000570177 HOXD11P31277 338 aaPredicted RBP11.75□□□□□ -0.53
TCF4-245ENST00000570177 NLGN1Q8N2Q7 840 aa11.75□□□□□ -0.53
TCF4-245ENST00000570177 KIF20AO95235 890 aa11.74□□□□□ -0.53
TCF4-245ENST00000570177 PDE6AP16499 860 aa11.74□□□□□ -0.53
TCF4-245ENST00000570177 TERF1P54274 439 aa11.74□□□□□ -0.53
TCF4-245ENST00000570177 TTF1Q15361 905 aaPredicted RBP11.74□□□□□ -0.53
TCF4-245ENST00000570177 UBE3CQ15386 1083 aa11.74□□□□□ -0.53
TCF4-245ENST00000570177 RUFY3Q7L099 469 aa11.74□□□□□ -0.53
TCF4-245ENST00000570177 MTERF4Q7Z6M4 381 aaKnown RBP11.74□□□□□ -0.53
TCF4-245ENST00000570177 FLAD1Q8NFF5 587 aa11.74□□□□□ -0.53
TCF4-245ENST00000570177 U3KPZ7 1027 aaPredicted RBP11.74□□□□□ -0.53
TCF4-245ENST00000570177 SLC9C2Q5TAH2 1124 aa11.74□□□□□ -0.53
TCF4-245ENST00000570177 STOX1Q6ZVD7 989 aa11.74□□□□□ -0.53
TCF4-245ENST00000570177 ZGPATQ8N5A5 531 aaKnown RBP11.74□□□□□ -0.53
TCF4-245ENST00000570177 JAKMIP1Q96N16 626 aaKnown RBP11.74□□□□□ -0.53
TCF4-245ENST00000570177 ANKRD2Q9GZV1 360 aa11.74□□□□□ -0.53
TCF4-245ENST00000570177 CHMP5Q9NZZ3 219 aa11.74□□□□□ -0.53
TCF4-245ENST00000570177 ANKRD31Q8N7Z5 1873 aa11.74□□□□□ -0.53
TCF4-245ENST00000570177 DOCK2Q92608 1830 aa11.73□□□□□ -0.53
TCF4-245ENST00000570177 PTMAP06454 111 aaKnown RBP11.73□□□□□ -0.53
TCF4-245ENST00000570177 CASTP20810 708 aaKnown RBP11.73□□□□□ -0.53
TCF4-245ENST00000570177 AK2P54819 239 aa11.73□□□□□ -0.53
TCF4-245ENST00000570177 ST5P78524 1137 aa11.73□□□□□ -0.53
TCF4-245ENST00000570177 L1TD1Q5T7N2 865 aaKnown RBP11.73□□□□□ -0.53
TCF4-245ENST00000570177 CNPY4Q8N129 248 aa11.73□□□□□ -0.53
TCF4-245ENST00000570177 ZNF384Q8TF68 577 aa11.73□□□□□ -0.53
TCF4-245ENST00000570177 IQSEC3Q9UPP2 1182 aaPredicted RBP11.73□□□□□ -0.53
TCF4-245ENST00000570177 ZNF532Q9HCE3 1301 aa11.73□□□□□ -0.53
TCF4-245ENST00000570177 MYH7P12883 1935 aa11.72□□□□□ -0.53
TCF4-245ENST00000570177 IDH1O75874 414 aaKnown RBP11.72□□□□□ -0.53
TCF4-245ENST00000570177 MMP10P09238 476 aa11.72□□□□□ -0.53
TCF4-245ENST00000570177 MCM2P49736 904 aa11.72□□□□□ -0.53
TCF4-245ENST00000570177 DMTNQ08495 405 aa11.72□□□□□ -0.53
TCF4-245ENST00000570177 NFKBIBQ15653 356 aa11.72□□□□□ -0.53
TCF4-245ENST00000570177 SLC15A2Q16348 729 aa11.72□□□□□ -0.53
TCF4-245ENST00000570177 AXDND1Q5T1B0 1012 aaPredicted RBP11.72□□□□□ -0.53
TCF4-245ENST00000570177 TTLL5Q6EMB2 1281 aa11.72□□□□□ -0.53
TCF4-245ENST00000570177 CRAMP1Q96RY5 1269 aa11.72□□□□□ -0.53
TCF4-245ENST00000570177 BRIP1Q9BX63 1249 aa11.72□□□□□ -0.53
TCF4-245ENST00000570177 NPHP1O15259 732 aa11.72□□□□□ -0.53
TCF4-245ENST00000570177 GPAA1O43292 621 aa11.72□□□□□ -0.53
TCF4-245ENST00000570177 KCNJ4P48050 445 aa11.72□□□□□ -0.53
TCF4-245ENST00000570177 GPSM2P81274 684 aa11.72□□□□□ -0.53
TCF4-245ENST00000570177 SLC20A2Q08357 652 aa11.72□□□□□ -0.53
TCF4-245ENST00000570177 ST3GAL1Q11201 340 aa11.72□□□□□ -0.53
TCF4-245ENST00000570177 WASHC4Q2M389 1173 aa11.72□□□□□ -0.53
TCF4-245ENST00000570177 LRRFIP1Q32MZ4 808 aaKnown RBP11.72□□□□□ -0.53
TCF4-245ENST00000570177 C15orf52Q6ZUT6 534 aaKnown RBP11.72□□□□□ -0.53
TCF4-245ENST00000570177 STRBPQ96SI9 672 aaKnown RBP11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms