RNA–Protein interactions for RNA: ENST00000570001.5

PDXDC1-217, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

TSL 2

Gene PDXDC1, Length 4,828 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-217ENST00000570001 ZNF532Q9HCE3 1301 aa13.62□□□□□ -0.23
PDXDC1-217ENST00000570001 MBD4O95243 580 aa13.62□□□□□ -0.23
PDXDC1-217ENST00000570001 ATP2B1P20020 1258 aa13.62□□□□□ -0.23
PDXDC1-217ENST00000570001 SLFNL1Q499Z3 407 aa13.62□□□□□ -0.23
PDXDC1-217ENST00000570001 SPATA5Q8NB90 893 aa13.62□□□□□ -0.23
PDXDC1-217ENST00000570001 TRIM5Q9C035 493 aa13.62□□□□□ -0.23
PDXDC1-217ENST00000570001 RTCBQ9Y3I0 505 aaKnown RBP13.62□□□□□ -0.23
PDXDC1-217ENST00000570001 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.62□□□□□ -0.23
PDXDC1-217ENST00000570001 RFX7Q2KHR2 1363 aa13.62□□□□□ -0.23
PDXDC1-217ENST00000570001 GNPATO15228 680 aa13.61□□□□□ -0.23
PDXDC1-217ENST00000570001 LMO7Q8WWI1 1683 aa13.61□□□□□ -0.23
PDXDC1-217ENST00000570001 WASF1Q92558 559 aa13.61□□□□□ -0.23
PDXDC1-217ENST00000570001 NAT10Q9H0A0 1025 aaKnown RBP13.61□□□□□ -0.23
PDXDC1-217ENST00000570001 USP25Q9UHP3 1055 aa13.61□□□□□ -0.23
PDXDC1-217ENST00000570001 CDHR2Q9BYE9 1310 aa13.61□□□□□ -0.23
PDXDC1-217ENST00000570001 POLR3DP05423 398 aaPredicted RBP13.61□□□□□ -0.23
PDXDC1-217ENST00000570001 PHKA1P46020 1223 aa13.61□□□□□ -0.23
PDXDC1-217ENST00000570001 TPTE2Q6XPS3 522 aa13.61□□□□□ -0.23
PDXDC1-217ENST00000570001 MIGA1Q8NAN2 632 aa13.61□□□□□ -0.23
PDXDC1-217ENST00000570001 M0R2C6 588 aa13.61□□□□□ -0.23
PDXDC1-217ENST00000570001 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.61□□□□□ -0.23
PDXDC1-217ENST00000570001 OSBP2Q969R2 916 aa13.61□□□□□ -0.23
PDXDC1-217ENST00000570001 CNNM2Q9H8M5 875 aa13.6□□□□□ -0.23
PDXDC1-217ENST00000570001 DACT1Q9NYF0 836 aa13.6□□□□□ -0.23
PDXDC1-217ENST00000570001 ZBTB43O43298 467 aa13.6□□□□□ -0.23
PDXDC1-217ENST00000570001 FGAP02671 866 aa13.6□□□□□ -0.23
PDXDC1-217ENST00000570001 IARSP41252 1262 aaKnown RBP13.6□□□□□ -0.23
PDXDC1-217ENST00000570001 CCDC82Q8N4S0 544 aa13.6□□□□□ -0.23
PDXDC1-217ENST00000570001 KRT23Q9C075 422 aa13.6□□□□□ -0.23
PDXDC1-217ENST00000570001 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.6□□□□□ -0.23
PDXDC1-217ENST00000570001 BRMS1Q9HCU9 246 aa13.6□□□□□ -0.23
PDXDC1-217ENST00000570001 GNAT2P19087 354 aa13.6□□□□□ -0.23
PDXDC1-217ENST00000570001 CASP7P55210 303 aa13.6□□□□□ -0.23
PDXDC1-217ENST00000570001 CCNL1Q9UK58 526 aaPredicted RBP13.6□□□□□ -0.23
PDXDC1-217ENST00000570001 CCDC196A0A1B0GTZ2 297 aa13.59□□□□□ -0.23
PDXDC1-217ENST00000570001 RANBP6O60518 1105 aaKnown RBP13.59□□□□□ -0.23
PDXDC1-217ENST00000570001 SUSD4Q5VX71 490 aa13.59□□□□□ -0.23
PDXDC1-217ENST00000570001 DZIP1Q86YF9 867 aaKnown RBP13.59□□□□□ -0.23
PDXDC1-217ENST00000570001 HOOK1Q9UJC3 728 aaKnown RBP13.59□□□□□ -0.23
PDXDC1-217ENST00000570001 TICAM2Q86XR7 235 aa13.59□□□□□ -0.23
PDXDC1-217ENST00000570001 SPC24Q8NBT2 197 aa13.59□□□□□ -0.23
PDXDC1-217ENST00000570001 PALLDQ8WX93 1383 aa13.59□□□□□ -0.23
PDXDC1-217ENST00000570001 CHGBP05060 677 aa13.59□□□□□ -0.23
PDXDC1-217ENST00000570001 PDE6AP16499 860 aa13.59□□□□□ -0.23
PDXDC1-217ENST00000570001 RASSF8Q8NHQ8 419 aa13.59□□□□□ -0.23
PDXDC1-217ENST00000570001 PLA2G12BQ9BX93 195 aa13.59□□□□□ -0.23
PDXDC1-217ENST00000570001 ARMT1Q9H993 441 aa13.59□□□□□ -0.23
PDXDC1-217ENST00000570001 SEC31BQ9NQW1 1179 aa13.59□□□□□ -0.23
PDXDC1-217ENST00000570001 MED23Q9ULK4 1368 aa13.59□□□□□ -0.23
PDXDC1-217ENST00000570001 SSRP1Q08945 709 aaKnown RBP13.59□□□□□ -0.23
PDXDC1-217ENST00000570001 B4E1Z4 1266 aa13.58□□□□□ -0.24
PDXDC1-217ENST00000570001 PFKFB2O60825 505 aa13.58□□□□□ -0.24
PDXDC1-217ENST00000570001 UVSSAQ2YD98 709 aa13.58□□□□□ -0.24
PDXDC1-217ENST00000570001 CCAR1Q8IX12 1150 aaKnown RBP13.58□□□□□ -0.24
PDXDC1-217ENST00000570001 FSIP1Q8NA03 581 aa13.58□□□□□ -0.24
PDXDC1-217ENST00000570001 USP21Q9UK80 565 aa13.58□□□□□ -0.24
PDXDC1-217ENST00000570001 MTMR7Q9Y216 660 aa13.58□□□□□ -0.24
PDXDC1-217ENST00000570001 NAA16Q6N069 864 aaPredicted RBP13.58□□□□□ -0.24
PDXDC1-217ENST00000570001 TOB2Q14106 344 aaPredicted RBP13.58□□□□□ -0.24
PDXDC1-217ENST00000570001 IQCA1Q86XH1 822 aa13.58□□□□□ -0.24
PDXDC1-217ENST00000570001 MAGEB6P1A0A0J9YX57 407 aa13.57□□□□□ -0.24
PDXDC1-217ENST00000570001 SCRN1Q12765 414 aa13.57□□□□□ -0.24
PDXDC1-217ENST00000570001 WTAPQ15007 396 aa13.57□□□□□ -0.24
PDXDC1-217ENST00000570001 RPGRQ92834 1020 aaKnown RBP13.57□□□□□ -0.24
PDXDC1-217ENST00000570001 ALG1Q9BT22 464 aa13.57□□□□□ -0.24
PDXDC1-217ENST00000570001 PUS7LQ9H0K6 701 aaKnown RBP13.57□□□□□ -0.24
PDXDC1-217ENST00000570001 ZNF609O15014 1411 aa13.57□□□□□ -0.24
PDXDC1-217ENST00000570001 LRP10Q7Z4F1 713 aa13.57□□□□□ -0.24
PDXDC1-217ENST00000570001 ZNF274Q96GC6 653 aaPredicted RBP13.57□□□□□ -0.24
PDXDC1-217ENST00000570001 SLC26A6Q9BXS9 759 aa13.57□□□□□ -0.24
PDXDC1-217ENST00000570001 ANGEL1Q9UNK9 670 aaKnown RBP13.57□□□□□ -0.24
PDXDC1-217ENST00000570001 RXRAP19793 462 aa13.57□□□□□ -0.24
PDXDC1-217ENST00000570001 UBE3CQ15386 1083 aa13.57□□□□□ -0.24
PDXDC1-217ENST00000570001 TPM3P06753 285 aa13.57□□□□□ -0.24
PDXDC1-217ENST00000570001 MCAMP43121 646 aa13.57□□□□□ -0.24
PDXDC1-217ENST00000570001 BCAMP50895 628 aa13.57□□□□□ -0.24
PDXDC1-217ENST00000570001 KCNQ4P56696 695 aa13.57□□□□□ -0.24
PDXDC1-217ENST00000570001 NSFL1CQ9UNZ2 370 aaKnown RBP13.57□□□□□ -0.24
PDXDC1-217ENST00000570001 CTAGE5O15320 804 aa13.56□□□□□ -0.24
PDXDC1-217ENST00000570001 CSF1RP07333 972 aa13.56□□□□□ -0.24
PDXDC1-217ENST00000570001 TSGA10IPQ3SY00 556 aa13.56□□□□□ -0.24
PDXDC1-217ENST00000570001 SPATA31A1Q5TZJ5 1347 aa13.56□□□□□ -0.24
PDXDC1-217ENST00000570001 CHRNDQ07001 517 aa13.56□□□□□ -0.24
PDXDC1-217ENST00000570001 LEO1Q8WVC0 666 aaPredicted RBP13.56□□□□□ -0.24
PDXDC1-217ENST00000570001 ADD2P35612 726 aa13.56□□□□□ -0.24
PDXDC1-217ENST00000570001 KDM3BQ7LBC6 1761 aa13.56□□□□□ -0.24
PDXDC1-217ENST00000570001 ADCY5O95622 1261 aa13.56□□□□□ -0.24
PDXDC1-217ENST00000570001 USP5P45974 858 aa13.56□□□□□ -0.24
PDXDC1-217ENST00000570001 CEP57L1Q8IYX8 460 aa13.55□□□□□ -0.24
PDXDC1-217ENST00000570001 ESR2Q92731 530 aa13.55□□□□□ -0.24
PDXDC1-217ENST00000570001 RIPOR2Q9Y4F9 1068 aa13.55□□□□□ -0.24
PDXDC1-217ENST00000570001 COL15A1P39059 1388 aa13.55□□□□□ -0.24
PDXDC1-217ENST00000570001 USPL1Q5W0Q7 1092 aa13.55□□□□□ -0.24
PDXDC1-217ENST00000570001 CCDC24Q8N4L8 307 aa13.55□□□□□ -0.24
PDXDC1-217ENST00000570001 TMEM87BQ96K49 555 aa13.55□□□□□ -0.24
PDXDC1-217ENST00000570001 DENND2AQ9ULE3 1009 aa13.55□□□□□ -0.24
PDXDC1-217ENST00000570001 SCARF1Q14162 830 aa13.55□□□□□ -0.24
PDXDC1-217ENST00000570001 TMTC2Q8N394 836 aa13.55□□□□□ -0.24
PDXDC1-217ENST00000570001 ANKRD2Q9GZV1 360 aa13.55□□□□□ -0.24
PDXDC1-217ENST00000570001 PDIA3P30101 505 aaKnown RBP13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms