RNA–Protein interactions for RNA: ENST00000569829.1

RPAP1-212, Transcript of RNA polymerase II associated protein 1, humanhuman

TSL 1 (best)

Gene RPAP1, Length 597 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1-212ENST00000569829 ZSWIM8A7E2V4 1837 aa13.02□□□□□ -0.33
RPAP1-212ENST00000569829 ANP32CO43423 234 aa13.01□□□□□ -0.33
RPAP1-212ENST00000569829 TAF5LO75529 589 aa13.01□□□□□ -0.33
RPAP1-212ENST00000569829 USP2O75604 605 aaPredicted RBP13.01□□□□□ -0.33
RPAP1-212ENST00000569829 ALDH1A1P00352 501 aa13.01□□□□□ -0.33
RPAP1-212ENST00000569829 MAP3K11Q16584 847 aa13.01□□□□□ -0.33
RPAP1-212ENST00000569829 HELBQ8NG08 1087 aaPredicted RBP13.01□□□□□ -0.33
RPAP1-212ENST00000569829 CHMP4AQ9BY43 222 aa13.01□□□□□ -0.33
RPAP1-212ENST00000569829 EFCC1Q9HA90 598 aa13.01□□□□□ -0.33
RPAP1-212ENST00000569829 VEZTQ9HBM0 779 aa13.01□□□□□ -0.33
RPAP1-212ENST00000569829 CD209Q9NNX6 404 aa13.01□□□□□ -0.33
RPAP1-212ENST00000569829 MYO3BQ8WXR4 1341 aa13.01□□□□□ -0.33
RPAP1-212ENST00000569829 MYH3P11055 1940 aa13.01□□□□□ -0.33
RPAP1-212ENST00000569829 RBBP6Q7Z6E9 1792 aaKnown RBP13□□□□□ -0.33
RPAP1-212ENST00000569829 IRS2Q9Y4H2 1338 aa13□□□□□ -0.33
RPAP1-212ENST00000569829 DLGAP5Q15398 846 aa13□□□□□ -0.33
RPAP1-212ENST00000569829 CFAP100Q494V2 611 aa13□□□□□ -0.33
RPAP1-212ENST00000569829 INTS3Q68E01 1043 aaKnown RBP13□□□□□ -0.33
RPAP1-212ENST00000569829 UBE3BQ7Z3V4 1068 aa13□□□□□ -0.33
RPAP1-212ENST00000569829 WWC1Q8IX03 1113 aa13□□□□□ -0.33
RPAP1-212ENST00000569829 ARMC5Q96C12 935 aa13□□□□□ -0.33
RPAP1-212ENST00000569829 ELP3Q9H9T3 547 aa13□□□□□ -0.33
RPAP1-212ENST00000569829 LEMD3Q9Y2U8 911 aa13□□□□□ -0.33
RPAP1-212ENST00000569829 PTCH2Q9Y6C5 1203 aa13□□□□□ -0.33
RPAP1-212ENST00000569829 LAMA3Q16787 3333 aa13□□□□□ -0.33
RPAP1-212ENST00000569829 COL6A3P12111 3177 aa13□□□□□ -0.33
RPAP1-212ENST00000569829 NEURL1BA8MQ27 555 aa12.99□□□□□ -0.33
RPAP1-212ENST00000569829 ZBTB48P10074 688 aaPredicted RBP12.99□□□□□ -0.33
RPAP1-212ENST00000569829 HSP90B1P14625 803 aaKnown RBP12.99□□□□□ -0.33
RPAP1-212ENST00000569829 ITGA6P23229 1130 aa12.99□□□□□ -0.33
RPAP1-212ENST00000569829 SP3Q02447 781 aa12.99□□□□□ -0.33
RPAP1-212ENST00000569829 CHRNDQ07001 517 aa12.99□□□□□ -0.33
RPAP1-212ENST00000569829 ERO1AQ96HE7 468 aa12.99□□□□□ -0.33
RPAP1-212ENST00000569829 ZNF333Q96JL9 665 aa12.99□□□□□ -0.33
RPAP1-212ENST00000569829 OTOFQ9HC10 1997 aa12.98□□□□□ -0.33
RPAP1-212ENST00000569829 A0A0C4DFX4 3053 aa12.98□□□□□ -0.33
RPAP1-212ENST00000569829 H7C1W4 665 aa12.98□□□□□ -0.33
RPAP1-212ENST00000569829 PPP1R12BO60237 982 aaPredicted RBP12.98□□□□□ -0.33
RPAP1-212ENST00000569829 IGHMBP2P38935 993 aaKnown RBP12.98□□□□□ -0.33
RPAP1-212ENST00000569829 INHBEP58166 350 aa12.98□□□□□ -0.33
RPAP1-212ENST00000569829 KSR2Q6VAB6 950 aa12.98□□□□□ -0.33
RPAP1-212ENST00000569829 ARHGAP39Q9C0H5 1083 aa12.98□□□□□ -0.33
RPAP1-212ENST00000569829 IL16Q14005 1332 aa12.97□□□□□ -0.33
RPAP1-212ENST00000569829 SPDYE2BA6NHP3 402 aa12.97□□□□□ -0.33
RPAP1-212ENST00000569829 H0YGN5 161 aa12.97□□□□□ -0.33
RPAP1-212ENST00000569829 SPDYE6P0CI01 402 aa12.97□□□□□ -0.33
RPAP1-212ENST00000569829 RASA3Q14644 834 aa12.97□□□□□ -0.33
RPAP1-212ENST00000569829 SH3TC2Q8TF17 1288 aa12.97□□□□□ -0.33
RPAP1-212ENST00000569829 BRI3BPQ8WY22 251 aa12.97□□□□□ -0.33
RPAP1-212ENST00000569829 TSR2Q969E8 191 aaKnown RBP12.97□□□□□ -0.33
RPAP1-212ENST00000569829 OPTNQ96CV9 577 aa12.97□□□□□ -0.33
RPAP1-212ENST00000569829 MS4A4AQ96JQ5 239 aa12.97□□□□□ -0.33
RPAP1-212ENST00000569829 MRS2Q9HD23 443 aa12.97□□□□□ -0.33
RPAP1-212ENST00000569829 LAMB1P07942 1786 aa12.97□□□□□ -0.33
RPAP1-212ENST00000569829 TESPA1A2RU30 521 aaPredicted RBP12.96□□□□□ -0.33
RPAP1-212ENST00000569829 DDX58O95786 925 aaKnown RBP12.96□□□□□ -0.33
RPAP1-212ENST00000569829 KCNJ4P48050 445 aa12.96□□□□□ -0.33
RPAP1-212ENST00000569829 CASP7P55210 303 aa12.96□□□□□ -0.33
RPAP1-212ENST00000569829 CCDC30Q5VVM6 783 aa12.96□□□□□ -0.33
RPAP1-212ENST00000569829 FAM43AQ8N2R8 423 aa12.96□□□□□ -0.33
RPAP1-212ENST00000569829 OTUD5Q96G74 571 aa12.96□□□□□ -0.33
RPAP1-212ENST00000569829 MPHOSPH8Q99549 860 aa12.96□□□□□ -0.33
RPAP1-212ENST00000569829 TMEM106CQ9BVX2 250 aa12.96□□□□□ -0.33
RPAP1-212ENST00000569829 ECM29Q5VYK3 1845 aa12.96□□□□□ -0.33
RPAP1-212ENST00000569829 RBM5P52756 815 aaKnown RBP eCLIP12.95□□□□□ -0.34
RPAP1-212ENST00000569829 SLC4A8Q2Y0W8 1093 aa12.95□□□□□ -0.34
RPAP1-212ENST00000569829 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.95□□□□□ -0.34
RPAP1-212ENST00000569829 POTEDQ86YR6 584 aa12.95□□□□□ -0.34
RPAP1-212ENST00000569829 WDR63Q8IWG1 891 aa12.95□□□□□ -0.34
RPAP1-212ENST00000569829 MTMR14Q8NCE2 650 aa12.95□□□□□ -0.34
RPAP1-212ENST00000569829 COL1A1P02452 1464 aaPredicted RBP12.95□□□□□ -0.34
RPAP1-212ENST00000569829 CSF1RP07333 972 aa12.94□□□□□ -0.34
RPAP1-212ENST00000569829 IREB2P48200 963 aaKnown RBP12.94□□□□□ -0.34
RPAP1-212ENST00000569829 TAF1CQ15572 869 aaPredicted RBP12.94□□□□□ -0.34
RPAP1-212ENST00000569829 GRIK5Q16478 980 aa12.94□□□□□ -0.34
RPAP1-212ENST00000569829 SUPT20HL1Q3ZLR7 823 aa12.94□□□□□ -0.34
RPAP1-212ENST00000569829 SLC9C1Q4G0N8 1177 aa12.94□□□□□ -0.34
RPAP1-212ENST00000569829 CHRDL2Q6WN34 429 aa12.94□□□□□ -0.34
RPAP1-212ENST00000569829 ANKRD13AQ8IZ07 590 aa12.94□□□□□ -0.34
RPAP1-212ENST00000569829 ZNF594Q96JF6 807 aaPredicted RBP12.94□□□□□ -0.34
RPAP1-212ENST00000569829 ANKRD2Q9GZV1 360 aa12.94□□□□□ -0.34
RPAP1-212ENST00000569829 TDRD3Q9H7E2 651 aaKnown RBP12.94□□□□□ -0.34
RPAP1-212ENST00000569829 A0A1B0GUL6 1792 aa12.94□□□□□ -0.34
RPAP1-212ENST00000569829 CCL15-CCL14A0A0B4J2E2 113 aa12.93□□□□□ -0.34
RPAP1-212ENST00000569829 PLIN1O60240 522 aa12.93□□□□□ -0.34
RPAP1-212ENST00000569829 CTGFP29279 349 aa12.93□□□□□ -0.34
RPAP1-212ENST00000569829 GCKRQ14397 625 aa12.93□□□□□ -0.34
RPAP1-212ENST00000569829 MTFR1Q15390 333 aa12.93□□□□□ -0.34
RPAP1-212ENST00000569829 CCL15Q16663 113 aa12.93□□□□□ -0.34
RPAP1-212ENST00000569829 TEPSINQ96N21 525 aa12.93□□□□□ -0.34
RPAP1-212ENST00000569829 PLA2G12BQ9BX93 195 aa12.93□□□□□ -0.34
RPAP1-212ENST00000569829 TMEM39BQ9GZU3 492 aa12.93□□□□□ -0.34
RPAP1-212ENST00000569829 ZNF70Q9UC06 446 aaPredicted RBP12.93□□□□□ -0.34
RPAP1-212ENST00000569829 PPP2R3BQ9Y5P8 575 aa12.93□□□□□ -0.34
RPAP1-212ENST00000569829 TCP10L2B9ZVM9 353 aa12.92□□□□□ -0.34
RPAP1-212ENST00000569829 IL1R1P14778 569 aa12.92□□□□□ -0.34
RPAP1-212ENST00000569829 NEXNQ0ZGT2 675 aa12.92□□□□□ -0.34
RPAP1-212ENST00000569829 VGLL4Q14135 290 aa12.92□□□□□ -0.34
RPAP1-212ENST00000569829 EPHA10Q5JZY3 1008 aa12.92□□□□□ -0.34
RPAP1-212ENST00000569829 OTUD7BQ6GQQ9 843 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms