RNA–Protein interactions for RNA: ENST00000569702.1

SHCBP1-207, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 3

Gene SHCBP1, Length 465 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-207ENST00000569702 PDE3AQ14432 1141 aa13.75□□□□□ -0.21
SHCBP1-207ENST00000569702 ATP2B3Q16720 1220 aa13.75□□□□□ -0.21
SHCBP1-207ENST00000569702 CDC37L1Q7L3B6 337 aa13.75□□□□□ -0.21
SHCBP1-207ENST00000569702 VPS37DQ86XT2 251 aa13.75□□□□□ -0.21
SHCBP1-207ENST00000569702 KIAA0825Q8IV33 1275 aa13.75□□□□□ -0.21
SHCBP1-207ENST00000569702 YTHDC1Q96MU7 727 aaKnown RBP13.75□□□□□ -0.21
SHCBP1-207ENST00000569702 GLIS2Q9BZE0 524 aaPredicted RBP13.75□□□□□ -0.21
SHCBP1-207ENST00000569702 PCNTO95613 3336 aa13.75□□□□□ -0.21
SHCBP1-207ENST00000569702 ASTN2O75129 1339 aaPredicted RBP13.74□□□□□ -0.21
SHCBP1-207ENST00000569702 SCARF1Q14162 830 aa13.74□□□□□ -0.21
SHCBP1-207ENST00000569702 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.74□□□□□ -0.21
SHCBP1-207ENST00000569702 ZBED3Q96IU2 234 aaPredicted RBP13.74□□□□□ -0.21
SHCBP1-207ENST00000569702 HDAC9Q9UKV0 1011 aa13.74□□□□□ -0.21
SHCBP1-207ENST00000569702 DDX19BQ9UMR2 479 aa13.74□□□□□ -0.21
SHCBP1-207ENST00000569702 JAG2Q9Y219 1238 aa13.74□□□□□ -0.21
SHCBP1-207ENST00000569702 COG6Q9Y2V7 657 aa13.74□□□□□ -0.21
SHCBP1-207ENST00000569702 WNT10BO00744 389 aa13.73□□□□□ -0.21
SHCBP1-207ENST00000569702 ZBTB22O15209 634 aa13.73□□□□□ -0.21
SHCBP1-207ENST00000569702 TFCP2Q12800 502 aa13.73□□□□□ -0.21
SHCBP1-207ENST00000569702 NBPF9Q3BBW0 867 aa13.73□□□□□ -0.21
SHCBP1-207ENST00000569702 MFSD14BQ5SR56 506 aa13.73□□□□□ -0.21
SHCBP1-207ENST00000569702 C20orf194Q5TEA3 1177 aa13.73□□□□□ -0.21
SHCBP1-207ENST00000569702 CST9Q5W186 159 aa13.73□□□□□ -0.21
SHCBP1-207ENST00000569702 CEP85Q6P2H3 762 aa13.73□□□□□ -0.21
SHCBP1-207ENST00000569702 USP48Q86UV5 1035 aa13.73□□□□□ -0.21
SHCBP1-207ENST00000569702 DCPSQ96C86 337 aaKnown RBP13.73□□□□□ -0.21
SHCBP1-207ENST00000569702 KLRG1Q96E93 195 aa13.73□□□□□ -0.21
SHCBP1-207ENST00000569702 ZBTB40Q9NUA8 1239 aa13.73□□□□□ -0.21
SHCBP1-207ENST00000569702 GGA3Q9NZ52 723 aa13.73□□□□□ -0.21
SHCBP1-207ENST00000569702 IQSEC3Q9UPP2 1182 aaPredicted RBP13.73□□□□□ -0.21
SHCBP1-207ENST00000569702 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.73□□□□□ -0.21
SHCBP1-207ENST00000569702 POLR2AP24928 1970 aaKnown RBP13.72□□□□□ -0.21
SHCBP1-207ENST00000569702 PITPNM2Q9BZ72 1349 aa13.72□□□□□ -0.21
SHCBP1-207ENST00000569702 TIMM10P62072 90 aa13.72□□□□□ -0.21
SHCBP1-207ENST00000569702 G3BP1Q13283 466 aaKnown RBP eCLIP13.72□□□□□ -0.21
SHCBP1-207ENST00000569702 ANGEL2Q5VTE6 544 aaKnown RBP13.72□□□□□ -0.21
SHCBP1-207ENST00000569702 KRT26Q7Z3Y9 468 aa13.72□□□□□ -0.21
SHCBP1-207ENST00000569702 MTMR14Q8NCE2 650 aa13.72□□□□□ -0.21
SHCBP1-207ENST00000569702 AKAP2Q9Y2D5 859 aa13.72□□□□□ -0.21
SHCBP1-207ENST00000569702 NOP58Q9Y2X3 529 aaKnown RBP13.72□□□□□ -0.21
SHCBP1-207ENST00000569702 A0A1B0GUL7 405 aa13.71□□□□□ -0.21
SHCBP1-207ENST00000569702 ADORA1P30542 326 aa13.71□□□□□ -0.21
SHCBP1-207ENST00000569702 DLK2Q6UY11 383 aa13.71□□□□□ -0.21
SHCBP1-207ENST00000569702 TBC1D22AQ8WUA7 517 aa13.71□□□□□ -0.21
SHCBP1-207ENST00000569702 CHMP4BQ9H444 224 aaKnown RBP13.71□□□□□ -0.21
SHCBP1-207ENST00000569702 TRPM7Q96QT4 1865 aa13.71□□□□□ -0.21
SHCBP1-207ENST00000569702 ADM5C9JUS6 153 aa13.7□□□□□ -0.22
SHCBP1-207ENST00000569702 F8W031 263 aaPredicted RBP13.7□□□□□ -0.22
SHCBP1-207ENST00000569702 FRAT2O75474 233 aaPredicted RBP13.7□□□□□ -0.22
SHCBP1-207ENST00000569702 SURF6O75683 361 aaKnown RBP13.7□□□□□ -0.22
SHCBP1-207ENST00000569702 PHKA1P46020 1223 aa13.7□□□□□ -0.22
SHCBP1-207ENST00000569702 CHAF1AQ13111 956 aaPredicted RBP13.7□□□□□ -0.22
SHCBP1-207ENST00000569702 GRIK5Q16478 980 aa13.7□□□□□ -0.22
SHCBP1-207ENST00000569702 CCDC102BQ68D86 513 aa13.7□□□□□ -0.22
SHCBP1-207ENST00000569702 SULF1Q8IWU6 871 aa13.7□□□□□ -0.22
SHCBP1-207ENST00000569702 GPR108Q9NPR9 543 aa13.7□□□□□ -0.22
SHCBP1-207ENST00000569702 COL1A1P02452 1464 aaPredicted RBP13.69□□□□□ -0.22
SHCBP1-207ENST00000569702 SPDYE2BA6NHP3 402 aa13.69□□□□□ -0.22
SHCBP1-207ENST00000569702 RASSF10A6NK89 507 aa13.69□□□□□ -0.22
SHCBP1-207ENST00000569702 SEMA3EO15041 775 aa13.69□□□□□ -0.22
SHCBP1-207ENST00000569702 CELF2O95319 508 aaKnown RBP13.69□□□□□ -0.22
SHCBP1-207ENST00000569702 SPDYE6P0CI01 402 aa13.69□□□□□ -0.22
SHCBP1-207ENST00000569702 DLGAP5Q15398 846 aa13.69□□□□□ -0.22
SHCBP1-207ENST00000569702 CFAP100Q494V2 611 aa13.69□□□□□ -0.22
SHCBP1-207ENST00000569702 RPAP2Q8IXW5 612 aaPredicted RBP13.69□□□□□ -0.22
SHCBP1-207ENST00000569702 JMYQ8N9B5 988 aa13.69□□□□□ -0.22
SHCBP1-207ENST00000569702 WDR66Q8TBY9 1149 aa13.69□□□□□ -0.22
SHCBP1-207ENST00000569702 XAGE2Q96GT9 111 aa13.69□□□□□ -0.22
SHCBP1-207ENST00000569702 GNL3LQ9NVN8 582 aaKnown RBP13.69□□□□□ -0.22
SHCBP1-207ENST00000569702 SERPINA10Q9UK55 444 aa13.69□□□□□ -0.22
SHCBP1-207ENST00000569702 TTF2Q9UNY4 1162 aaKnown RBP13.69□□□□□ -0.22
SHCBP1-207ENST00000569702 SUGT1Q9Y2Z0 365 aa13.69□□□□□ -0.22
SHCBP1-207ENST00000569702 PCDHAC2Q9Y5I4 1007 aa13.69□□□□□ -0.22
SHCBP1-207ENST00000569702 ARAP2Q8WZ64 1704 aa13.69□□□□□ -0.22
SHCBP1-207ENST00000569702 CNTNAP1P78357 1384 aa13.69□□□□□ -0.22
SHCBP1-207ENST00000569702 HDLBPQ00341 1268 aaKnown RBP13.68□□□□□ -0.22
SHCBP1-207ENST00000569702 SIRT2Q8IXJ6 389 aa13.68□□□□□ -0.22
SHCBP1-207ENST00000569702 PRMT6Q96LA8 375 aaPredicted RBP13.68□□□□□ -0.22
SHCBP1-207ENST00000569702 MRIQ9BWK5 157 aa13.68□□□□□ -0.22
SHCBP1-207ENST00000569702 TLL2Q9Y6L7 1015 aa13.68□□□□□ -0.22
SHCBP1-207ENST00000569702 DEFB115Q30KQ5 88 aa13.67□□□□□ -0.22
SHCBP1-207ENST00000569702 SAPCD2Q86UD0 394 aa13.67□□□□□ -0.22
SHCBP1-207ENST00000569702 CDCA5Q96FF9 252 aa13.67□□□□□ -0.22
SHCBP1-207ENST00000569702 NEUROD6Q96NK8 337 aa13.67□□□□□ -0.22
SHCBP1-207ENST00000569702 MKRN1Q9UHC7 482 aaKnown RBP13.67□□□□□ -0.22
SHCBP1-207ENST00000569702 DENND2AQ9ULE3 1009 aa13.67□□□□□ -0.22
SHCBP1-207ENST00000569702 AOX1Q06278 1338 aa13.66□□□□□ -0.22
SHCBP1-207ENST00000569702 PDS5AQ29RF7 1337 aaKnown RBP13.66□□□□□ -0.22
SHCBP1-207ENST00000569702 SALL1Q9NSC2 1324 aa13.66□□□□□ -0.22
SHCBP1-207ENST00000569702 CRKP46108 304 aa13.66□□□□□ -0.22
SHCBP1-207ENST00000569702 RRP1P56182 461 aaKnown RBP13.66□□□□□ -0.22
SHCBP1-207ENST00000569702 OS9Q13438 667 aaPredicted RBP13.66□□□□□ -0.22
SHCBP1-207ENST00000569702 RASGRF1Q13972 1273 aa13.66□□□□□ -0.22
SHCBP1-207ENST00000569702 TNNI3KQ59H18 835 aa13.66□□□□□ -0.22
SHCBP1-207ENST00000569702 APOBEC3FQ8IUX4 373 aaKnown RBP13.66□□□□□ -0.22
SHCBP1-207ENST00000569702 HHIPL1Q96JK4 782 aa13.66□□□□□ -0.22
SHCBP1-207ENST00000569702 ZNF408Q9H9D4 720 aa13.66□□□□□ -0.22
SHCBP1-207ENST00000569702 ABT1Q9ULW3 272 aaKnown RBP13.66□□□□□ -0.22
SHCBP1-207ENST00000569702 SCAF8Q9UPN6 1271 aaKnown RBP13.66□□□□□ -0.22
SHCBP1-207ENST00000569702 FPGT-TNNI3KV9GXZ4 949 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms