RNA–Protein interactions for RNA: ENST00000569440.5

BBS4-218, Transcript of Bardet-Biedl syndrome 4, human

TSL 4

Gene BBS4, Length 579 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
BBS4-218	ENST00000569440	USP2	O75604	605 aa	Predicted RBP	8.31	□□□□□ -1.08
BBS4-218	ENST00000569440	SASH1	O94885	1247 aa		8.31	□□□□□ -1.08
BBS4-218	ENST00000569440	CTGF	P29279	349 aa		8.31	□□□□□ -1.08
BBS4-218	ENST00000569440	MAGEA10	P43363	369 aa	Predicted RBP	8.31	□□□□□ -1.08
BBS4-218	ENST00000569440	KIF22	Q14807	665 aa		8.31	□□□□□ -1.08
BBS4-218	ENST00000569440	TAF7	Q15545	349 aa	Predicted RBP	8.31	□□□□□ -1.08
BBS4-218	ENST00000569440	DACT2	Q5SW24	774 aa		8.31	□□□□□ -1.08
BBS4-218	ENST00000569440	MCM10	Q7L590	875 aa		8.31	□□□□□ -1.08
BBS4-218	ENST00000569440	FAM43A	Q8N2R8	423 aa		8.31	□□□□□ -1.08
BBS4-218	ENST00000569440	OGFOD1	Q8N543	542 aa		8.31	□□□□□ -1.08
BBS4-218	ENST00000569440	BBX	Q8WY36	941 aa	Predicted RBP	8.31	□□□□□ -1.08
BBS4-218	ENST00000569440	TRMT112	Q9UI30	125 aa	Known RBP	8.31	□□□□□ -1.08
BBS4-218	ENST00000569440	RIPOR2	Q9Y4F9	1068 aa		8.31	□□□□□ -1.08
BBS4-218	ENST00000569440	IRS2	Q9Y4H2	1338 aa		8.3	□□□□□ -1.08
BBS4-218	ENST00000569440	SIPA1L3	O60292	1781 aa	Predicted RBP	8.3	□□□□□ -1.08
BBS4-218	ENST00000569440	UFL1	O94874	794 aa		8.3	□□□□□ -1.08
BBS4-218	ENST00000569440	RPS8	P62241	208 aa	Known RBP	8.3	□□□□□ -1.08
BBS4-218	ENST00000569440	MAP3K12	Q12852	859 aa		8.3	□□□□□ -1.08
BBS4-218	ENST00000569440	ANKRD13A	Q8IZ07	590 aa		8.3	□□□□□ -1.08
BBS4-218	ENST00000569440	MAFA	Q8NHW3	353 aa	Predicted RBP	8.3	□□□□□ -1.08
BBS4-218	ENST00000569440	OPTN	Q96CV9	577 aa		8.3	□□□□□ -1.08
BBS4-218	ENST00000569440	TRIM47	Q96LD4	638 aa		8.3	□□□□□ -1.08
BBS4-218	ENST00000569440	MXD3	Q9BW11	206 aa		8.3	□□□□□ -1.08
BBS4-218	ENST00000569440	MIS18A	Q9NYP9	233 aa		8.3	□□□□□ -1.08
BBS4-218	ENST00000569440	GGA1	Q9UJY5	639 aa		8.3	□□□□□ -1.08
BBS4-218	ENST00000569440	PCDHB8	Q9UN66	801 aa		8.3	□□□□□ -1.08
BBS4-218	ENST00000569440	SSC5D	A1L4H1	1573 aa		8.3	□□□□□ -1.08
BBS4-218	ENST00000569440	POLR2A	P24928	1970 aa	Known RBP	8.3	□□□□□ -1.08
BBS4-218	ENST00000569440	CCL15-CCL14	A0A0B4J2E2	113 aa		8.29	□□□□□ -1.08
BBS4-218	ENST00000569440	OSBP	P22059	807 aa		8.29	□□□□□ -1.08
BBS4-218	ENST00000569440	IREB2	P48200	963 aa	Known RBP	8.29	□□□□□ -1.08
BBS4-218	ENST00000569440	EIF4A1	P60842	406 aa	Known RBP	8.29	□□□□□ -1.08
BBS4-218	ENST00000569440	UBXN2A	P68543	259 aa		8.29	□□□□□ -1.08
BBS4-218	ENST00000569440	PDIA6	Q15084	440 aa		8.29	□□□□□ -1.08
BBS4-218	ENST00000569440	CCL15	Q16663	113 aa		8.29	□□□□□ -1.08
BBS4-218	ENST00000569440	SUPT20HL1	Q3ZLR7	823 aa		8.29	□□□□□ -1.08
BBS4-218	ENST00000569440	RTF1	Q92541	710 aa	Known RBP	8.29	□□□□□ -1.08
BBS4-218	ENST00000569440	CDX2	Q99626	313 aa	Predicted RBP	8.29	□□□□□ -1.08
BBS4-218	ENST00000569440	POLR3GL	Q9BT43	218 aa		8.29	□□□□□ -1.08
BBS4-218	ENST00000569440	UNC93B1	Q9H1C4	597 aa		8.29	□□□□□ -1.08
BBS4-218	ENST00000569440	ZMYND8	Q9ULU4	1186 aa	Predicted RBP	8.29	□□□□□ -1.08
BBS4-218	ENST00000569440	TRPC6	Q9Y210	931 aa		8.29	□□□□□ -1.08
BBS4-218	ENST00000569440	ARIH1	Q9Y4X5	557 aa	Predicted RBP	8.29	□□□□□ -1.08
BBS4-218	ENST00000569440	PPP2R3B	Q9Y5P8	575 aa		8.29	□□□□□ -1.08
BBS4-218	ENST00000569440	COL1A1	P02452	1464 aa	Predicted RBP	8.28	□□□□□ -1.08
BBS4-218	ENST00000569440	U2SURP	O15042	1029 aa	Known RBP	8.28	□□□□□ -1.08
BBS4-218	ENST00000569440	HTATSF1	O43719	755 aa	Known RBP	8.28	□□□□□ -1.08
BBS4-218	ENST00000569440	HOXD10	P28358	340 aa		8.28	□□□□□ -1.08
BBS4-218	ENST00000569440	GTF2A2	P52657	109 aa		8.28	□□□□□ -1.08
BBS4-218	ENST00000569440	DCTN1	Q14203	1278 aa		8.28	□□□□□ -1.08
BBS4-218	ENST00000569440	HSP90AB3P	Q58FF7	597 aa		8.28	□□□□□ -1.08
BBS4-218	ENST00000569440	STRIP1	Q5VSL9	837 aa		8.28	□□□□□ -1.08
BBS4-218	ENST00000569440	C17orf99	Q6UX52	265 aa		8.28	□□□□□ -1.08
BBS4-218	ENST00000569440	C7orf61	Q8IZ16	206 aa		8.28	□□□□□ -1.08
BBS4-218	ENST00000569440	HELB	Q8NG08	1087 aa	Predicted RBP	8.28	□□□□□ -1.08
BBS4-218	ENST00000569440	RAET1E	Q8TD07	263 aa		8.28	□□□□□ -1.08
BBS4-218	ENST00000569440	PAWR	Q96IZ0	340 aa	Known RBP	8.28	□□□□□ -1.08
BBS4-218	ENST00000569440	SNX27	Q96L92	541 aa		8.28	□□□□□ -1.08
BBS4-218	ENST00000569440	FAM161B	Q96MY7	647 aa		8.28	□□□□□ -1.08
BBS4-218	ENST00000569440	DCBLD2	Q96PD2	775 aa		8.28	□□□□□ -1.08
BBS4-218	ENST00000569440	UBE2O	Q9C0C9	1292 aa	Known RBP	8.28	□□□□□ -1.08
BBS4-218	ENST00000569440	CRISPLD2	Q9H0B8	497 aa		8.28	□□□□□ -1.08
BBS4-218	ENST00000569440	ZCCHC17	Q9NP64	241 aa	Known RBP	8.28	□□□□□ -1.08
BBS4-218	ENST00000569440	ANKIB1	Q9P2G1	1089 aa		8.28	□□□□□ -1.08
BBS4-218	ENST00000569440	LRRC37A	A6NMS7	1700 aa		8.28	□□□□□ -1.08
BBS4-218	ENST00000569440	MYO3B	Q8WXR4	1341 aa		8.28	□□□□□ -1.08
BBS4-218	ENST00000569440	TMEM265	A0A087WTH1	108 aa		8.27	□□□□□ -1.09
BBS4-218	ENST00000569440	TFRC	P02786	760 aa	Known RBP	8.27	□□□□□ -1.09
BBS4-218	ENST00000569440	SYN1	P17600	705 aa		8.27	□□□□□ -1.09
BBS4-218	ENST00000569440	PSMC4	P43686	418 aa		8.27	□□□□□ -1.09
BBS4-218	ENST00000569440	TJAP1	Q5JTD0	557 aa		8.27	□□□□□ -1.09
BBS4-218	ENST00000569440	NBPF12	Q5TAG4	269 aa	Predicted RBP	8.27	□□□□□ -1.09
BBS4-218	ENST00000569440	NECAB2	Q7Z6G3	386 aa		8.27	□□□□□ -1.09
BBS4-218	ENST00000569440	ZNF467	Q7Z7K2	595 aa	Predicted RBP	8.27	□□□□□ -1.09
BBS4-218	ENST00000569440	THUMPD2	Q9BTF0	503 aa	Known RBP	8.27	□□□□□ -1.09
BBS4-218	ENST00000569440	ELP3	Q9H9T3	547 aa		8.27	□□□□□ -1.09
BBS4-218	ENST00000569440	KNSTRN	Q9Y448	316 aa		8.27	□□□□□ -1.09
BBS4-218	ENST00000569440	ZNF804B	A4D1E1	1349 aa		8.27	□□□□□ -1.09
BBS4-218	ENST00000569440	FAM205A	Q6ZU69	1335 aa		8.27	□□□□□ -1.09
BBS4-218	ENST00000569440	WDHD1	O75717	1129 aa	Predicted RBP	8.26	□□□□□ -1.09
BBS4-218	ENST00000569440	PRKAR2B	P31323	418 aa		8.26	□□□□□ -1.09
BBS4-218	ENST00000569440	PPP1R3F	Q6ZSY5	799 aa	Predicted RBP	8.26	□□□□□ -1.09
BBS4-218	ENST00000569440	SLAIN1	Q8ND83	568 aa		8.26	□□□□□ -1.09
BBS4-218	ENST00000569440	DIS3L	Q8TF46	1054 aa	Known RBP	8.26	□□□□□ -1.09
BBS4-218	ENST00000569440	RSPH6A	Q9H0K4	717 aa		8.26	□□□□□ -1.09
BBS4-218	ENST00000569440	PAK6	Q9NQU5	681 aa	Predicted RBP	8.26	□□□□□ -1.09
BBS4-218	ENST00000569440	BIN2	Q9UBW5	565 aa	Predicted RBP	8.26	□□□□□ -1.09
BBS4-218	ENST00000569440	MYPN	Q86TC9	1320 aa		8.26	□□□□□ -1.09
BBS4-218	ENST00000569440	COL4A1	P02462	1669 aa		8.25	□□□□□ -1.09
BBS4-218	ENST00000569440	ZNF646	O15015	1829 aa	Predicted RBP	8.25	□□□□□ -1.09
BBS4-218	ENST00000569440	BTBD19	C9JJ37	291 aa		8.25	□□□□□ -1.09
BBS4-218	ENST00000569440	ATP2B4	P23634	1241 aa		8.25	□□□□□ -1.09
BBS4-218	ENST00000569440	PROSER3	Q2NL68	480 aa		8.25	□□□□□ -1.09
BBS4-218	ENST00000569440	ZNF697	Q5TEC3	545 aa		8.25	□□□□□ -1.09
BBS4-218	ENST00000569440	MTMR14	Q8NCE2	650 aa		8.25	□□□□□ -1.09
BBS4-218	ENST00000569440	PNISR	Q8TF01	805 aa	Known RBP	8.25	□□□□□ -1.09
BBS4-218	ENST00000569440	FAM89A	Q96GI7	184 aa		8.25	□□□□□ -1.09
BBS4-218	ENST00000569440	DEFB118	Q96PH6	123 aa		8.25	□□□□□ -1.09
BBS4-218	ENST00000569440	SEMA6B	Q9H3T3	888 aa		8.25	□□□□□ -1.09
BBS4-218	ENST00000569440	TTC28	Q96AY4	2481 aa		8.25	□□□□□ -1.09

Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms