RNA–Protein interactions for RNA: ENST00000569036.2

CDH3-208, Transcript of cadherin 3, humanhuman

TSL 4

Gene CDH3, Length 563 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-208ENST00000569036 XDHP47989 1333 aa14.83□□□□□ -0.04
CDH3-208ENST00000569036 SUPT20HL1Q3ZLR7 823 aa14.82□□□□□ -0.04
CDH3-208ENST00000569036 NBPF12Q5TAG4 269 aaPredicted RBP14.82□□□□□ -0.04
CDH3-208ENST00000569036 KIAA0825Q8IV33 1275 aa14.82□□□□□ -0.04
CDH3-208ENST00000569036 RAET1EQ8TD07 263 aa14.82□□□□□ -0.04
CDH3-208ENST00000569036 CNKSR2Q8WXI2 1034 aa14.82□□□□□ -0.04
CDH3-208ENST00000569036 FAM122AQ96E09 287 aa14.82□□□□□ -0.04
CDH3-208ENST00000569036 UNC93B1Q9H1C4 597 aa14.82□□□□□ -0.04
CDH3-208ENST00000569036 ZMYND8Q9ULU4 1186 aaPredicted RBP14.82□□□□□ -0.04
CDH3-208ENST00000569036 ZNF804BA4D1E1 1349 aa14.82□□□□□ -0.04
CDH3-208ENST00000569036 MED23Q9ULK4 1368 aa14.82□□□□□ -0.04
CDH3-208ENST00000569036 SGPL1O95470 568 aa14.81□□□□□ -0.04
CDH3-208ENST00000569036 HSPA5P11021 654 aaKnown RBP14.81□□□□□ -0.04
CDH3-208ENST00000569036 EIF2S2P20042 333 aaKnown RBP14.81□□□□□ -0.04
CDH3-208ENST00000569036 ATP2B4P23634 1241 aa14.81□□□□□ -0.04
CDH3-208ENST00000569036 GTF2A2P52657 109 aa14.81□□□□□ -0.04
CDH3-208ENST00000569036 UBXN2AP68543 259 aa14.81□□□□□ -0.04
CDH3-208ENST00000569036 RTL5Q5HYW3 569 aaPredicted RBP14.81□□□□□ -0.04
CDH3-208ENST00000569036 C7orf61Q8IZ16 206 aa14.81□□□□□ -0.04
CDH3-208ENST00000569036 TRIM47Q96LD4 638 aa14.81□□□□□ -0.04
CDH3-208ENST00000569036 BIN2Q9UBW5 565 aaPredicted RBP14.81□□□□□ -0.04
CDH3-208ENST00000569036 IRS2Q9Y4H2 1338 aa14.81□□□□□ -0.04
CDH3-208ENST00000569036 WDHD1O75717 1129 aaPredicted RBP14.8□□□□□ -0.04
CDH3-208ENST00000569036 OSBPP22059 807 aa14.8□□□□□ -0.04
CDH3-208ENST00000569036 HOXD11P31277 338 aaPredicted RBP14.8□□□□□ -0.04
CDH3-208ENST00000569036 MAGEA10P43363 369 aaPredicted RBP14.8□□□□□ -0.04
CDH3-208ENST00000569036 CDH23Q9H251 3354 aa14.79□□□□□ -0.04
CDH3-208ENST00000569036 IRS4O14654 1257 aaPredicted RBP14.79□□□□□ -0.04
CDH3-208ENST00000569036 PSMC4P43686 418 aa14.79□□□□□ -0.04
CDH3-208ENST00000569036 FAM109BQ6ICB4 259 aaPredicted RBP14.79□□□□□ -0.04
CDH3-208ENST00000569036 MYPNQ86TC9 1320 aa14.79□□□□□ -0.04
CDH3-208ENST00000569036 POTEB2H3BUK9 544 aa14.78□□□□□ -0.04
CDH3-208ENST00000569036 HOXD10P28358 340 aa14.78□□□□□ -0.04
CDH3-208ENST00000569036 DLGAP5Q15398 846 aa14.78□□□□□ -0.04
CDH3-208ENST00000569036 PAWRQ96IZ0 340 aaKnown RBP14.78□□□□□ -0.04
CDH3-208ENST00000569036 FAM161BQ96MY7 647 aa14.78□□□□□ -0.04
CDH3-208ENST00000569036 ISCA1Q9BUE6 129 aa14.78□□□□□ -0.04
CDH3-208ENST00000569036 PCDHAC2Q9Y5I4 1007 aa14.78□□□□□ -0.04
CDH3-208ENST00000569036 CLRN2A0PK11 232 aa14.77□□□□□ -0.05
CDH3-208ENST00000569036 TFRCP02786 760 aaKnown RBP14.77□□□□□ -0.05
CDH3-208ENST00000569036 U2AF1L5P0DN76 240 aaPredicted RBP14.77□□□□□ -0.05
CDH3-208ENST00000569036 SYN1P17600 705 aa14.77□□□□□ -0.05
CDH3-208ENST00000569036 EIF4G2P78344 907 aaKnown RBP eCLIP14.77□□□□□ -0.05
CDH3-208ENST00000569036 U2AF1Q01081 240 aaKnown RBP eCLIP14.77□□□□□ -0.05
CDH3-208ENST00000569036 PPP1R3FQ6ZSY5 799 aaPredicted RBP14.77□□□□□ -0.05
CDH3-208ENST00000569036 SYMPKQ92797 1274 aaKnown RBP14.77□□□□□ -0.05
CDH3-208ENST00000569036 UBE2OQ9C0C9 1292 aaKnown RBP14.77□□□□□ -0.05
CDH3-208ENST00000569036 ZCCHC17Q9NP64 241 aaKnown RBP14.77□□□□□ -0.05
CDH3-208ENST00000569036 SPEF2Q9C093 1822 aa14.77□□□□□ -0.05
CDH3-208ENST00000569036 COL2A1P02458 1487 aaPredicted RBP14.76□□□□□ -0.05
CDH3-208ENST00000569036 MGAMO43451 1857 aa14.76□□□□□ -0.05
CDH3-208ENST00000569036 BTBD19C9JJ37 291 aa14.76□□□□□ -0.05
CDH3-208ENST00000569036 ATP5J2-PTCD1G3V325 749 aa14.76□□□□□ -0.05
CDH3-208ENST00000569036 PER1O15534 1290 aaPredicted RBP14.76□□□□□ -0.05
CDH3-208ENST00000569036 VGLL4Q14135 290 aa14.76□□□□□ -0.05
CDH3-208ENST00000569036 TTLL5Q6EMB2 1281 aa14.76□□□□□ -0.05
CDH3-208ENST00000569036 C17orf99Q6UX52 265 aa14.76□□□□□ -0.05
CDH3-208ENST00000569036 MTMR14Q8NCE2 650 aa14.76□□□□□ -0.05
CDH3-208ENST00000569036 SLAIN1Q8ND83 568 aa14.76□□□□□ -0.05
CDH3-208ENST00000569036 HELBQ8NG08 1087 aaPredicted RBP14.76□□□□□ -0.05
CDH3-208ENST00000569036 MAFAQ8NHW3 353 aaPredicted RBP14.76□□□□□ -0.05
CDH3-208ENST00000569036 DIS3LQ8TF46 1054 aaKnown RBP14.76□□□□□ -0.05
CDH3-208ENST00000569036 COA1Q9GZY4 146 aa14.76□□□□□ -0.05
CDH3-208ENST00000569036 AOX1Q06278 1338 aa14.75□□□□□ -0.05
CDH3-208ENST00000569036 FMNL1O95466 1100 aaPredicted RBP14.75□□□□□ -0.05
CDH3-208ENST00000569036 CAPN2P17655 700 aa14.75□□□□□ -0.05
CDH3-208ENST00000569036 PRKCZQ05513 592 aa14.75□□□□□ -0.05
CDH3-208ENST00000569036 DEFB118Q96PH6 123 aa14.75□□□□□ -0.05
CDH3-208ENST00000569036 VEZTQ9HBM0 779 aa14.75□□□□□ -0.05
CDH3-208ENST00000569036 CPA4Q9UI42 421 aa14.75□□□□□ -0.05
CDH3-208ENST00000569036 NUDCQ9Y266 331 aa14.75□□□□□ -0.05
CDH3-208ENST00000569036 TNFRSF10AO00220 468 aa14.74□□□□□ -0.05
CDH3-208ENST00000569036 CETPP11597 493 aa14.74□□□□□ -0.05
CDH3-208ENST00000569036 RASA3Q14644 834 aa14.74□□□□□ -0.05
CDH3-208ENST00000569036 NECAB2Q7Z6G3 386 aa14.74□□□□□ -0.05
CDH3-208ENST00000569036 TXNRD3Q86VQ6 643 aa14.74□□□□□ -0.05
CDH3-208ENST00000569036 CFAP53Q96M91 514 aa14.74□□□□□ -0.05
CDH3-208ENST00000569036 FAM205AQ6ZU69 1335 aa14.73□□□□□ -0.05
CDH3-208ENST00000569036 ADGRA2Q96PE1 1338 aa14.73□□□□□ -0.05
CDH3-208ENST00000569036 SPDYE2BA6NHP3 402 aa14.73□□□□□ -0.05
CDH3-208ENST00000569036 MYO1BO43795 1136 aa14.73□□□□□ -0.05
CDH3-208ENST00000569036 SPDYE6P0CI01 402 aa14.73□□□□□ -0.05
CDH3-208ENST00000569036 CNGB1Q14028 1251 aaPredicted RBP14.73□□□□□ -0.05
CDH3-208ENST00000569036 CCDC152Q4G0S7 254 aa14.73□□□□□ -0.05
CDH3-208ENST00000569036 ANKRD18AQ8IVF6 992 aa14.73□□□□□ -0.05
CDH3-208ENST00000569036 PLBD2Q8NHP8 589 aa14.73□□□□□ -0.05
CDH3-208ENST00000569036 CRISPLD2Q9H0B8 497 aa14.73□□□□□ -0.05
CDH3-208ENST00000569036 ARAP2Q8WZ64 1704 aa14.72□□□□□ -0.05
CDH3-208ENST00000569036 TMEM265A0A087WTH1 108 aa14.72□□□□□ -0.05
CDH3-208ENST00000569036 INHAP05111 366 aa14.72□□□□□ -0.05
CDH3-208ENST00000569036 GTF2IP78347 998 aa14.72□□□□□ -0.05
CDH3-208ENST00000569036 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.72□□□□□ -0.05
CDH3-208ENST00000569036 CCDC85AQ96PX6 553 aaPredicted RBP14.72□□□□□ -0.05
CDH3-208ENST00000569036 PAK6Q9NQU5 681 aaPredicted RBP14.72□□□□□ -0.05
CDH3-208ENST00000569036 TSPYL4Q9UJ04 414 aa14.72□□□□□ -0.05
CDH3-208ENST00000569036 SPDYE5A6NIY4 337 aa14.71□□□□□ -0.05
CDH3-208ENST00000569036 CCT4P50991 539 aaKnown RBP14.71□□□□□ -0.05
CDH3-208ENST00000569036 MAP3K9P80192 1104 aa14.71□□□□□ -0.05
CDH3-208ENST00000569036 CFAP100Q494V2 611 aa14.71□□□□□ -0.05
CDH3-208ENST00000569036 CDAN1Q8IWY9 1227 aa14.71□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms