RNA–Protein interactions for RNA: ENST00000569035.5

NEIL1-221, Transcript of nei like DNA glycosylase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEIL1, Length 1,797 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEIL1-221ENST00000569035 CNNM1Q9NRU3 951 aa20.99■□□□□ 0.95
NEIL1-221ENST00000569035 LRP5O75197 1615 aa20.99■□□□□ 0.95
NEIL1-221ENST00000569035 PRPF40AO75400 957 aaKnown RBP20.97■□□□□ 0.95
NEIL1-221ENST00000569035 EDC3Q96F86 508 aaKnown RBP20.97■□□□□ 0.95
NEIL1-221ENST00000569035 ARAP2Q8WZ64 1704 aa20.97■□□□□ 0.95
NEIL1-221ENST00000569035 KIF3AQ9Y496 699 aa20.97■□□□□ 0.95
NEIL1-221ENST00000569035 DDX60Q8IY21 1712 aaKnown RBP20.97■□□□□ 0.95
NEIL1-221ENST00000569035 MPHOSPH8Q99549 860 aa20.96■□□□□ 0.95
NEIL1-221ENST00000569035 RIC1Q4ADV7 1423 aa20.96■□□□□ 0.95
NEIL1-221ENST00000569035 PDE8BO95263 885 aa20.95■□□□□ 0.94
NEIL1-221ENST00000569035 SYT1P21579 422 aa20.95■□□□□ 0.94
NEIL1-221ENST00000569035 SLC16A10Q8TF71 515 aa20.95■□□□□ 0.94
NEIL1-221ENST00000569035 ANP32BQ92688 251 aaKnown RBP20.95■□□□□ 0.94
NEIL1-221ENST00000569035 CELF1Q92879 486 aaKnown RBP20.95■□□□□ 0.94
NEIL1-221ENST00000569035 CDC5LQ99459 802 aaKnown RBP20.95■□□□□ 0.94
NEIL1-221ENST00000569035 GJB2P29033 226 aa20.95■□□□□ 0.94
NEIL1-221ENST00000569035 IGHMBP2P38935 993 aaKnown RBP20.95■□□□□ 0.94
NEIL1-221ENST00000569035 ME3Q16798 604 aa20.95■□□□□ 0.94
NEIL1-221ENST00000569035 CCDC83Q8IWF9 413 aa20.95■□□□□ 0.94
NEIL1-221ENST00000569035 FBXL16Q8N461 479 aa20.95■□□□□ 0.94
NEIL1-221ENST00000569035 LPIN2Q92539 896 aa20.95■□□□□ 0.94
NEIL1-221ENST00000569035 APPBP2Q92624 585 aa20.95■□□□□ 0.94
NEIL1-221ENST00000569035 F13A1P00488 732 aa20.94■□□□□ 0.94
NEIL1-221ENST00000569035 XRCC6P12956 609 aaKnown RBP eCLIP20.94■□□□□ 0.94
NEIL1-221ENST00000569035 PUM3Q15397 648 aaKnown RBP20.94■□□□□ 0.94
NEIL1-221ENST00000569035 LLPHQ9BRT6 129 aaKnown RBP20.94■□□□□ 0.94
NEIL1-221ENST00000569035 BRIP1Q9BX63 1249 aa20.94■□□□□ 0.94
NEIL1-221ENST00000569035 ZBTB7AO95365 584 aa20.93■□□□□ 0.94
NEIL1-221ENST00000569035 CYP21A2P08686 494 aa20.93■□□□□ 0.94
NEIL1-221ENST00000569035 DHX32Q7L7V1 743 aaKnown RBP20.93■□□□□ 0.94
NEIL1-221ENST00000569035 ANKRD18AQ8IVF6 992 aa20.93■□□□□ 0.94
NEIL1-221ENST00000569035 TPCN1Q9ULQ1 816 aa20.93■□□□□ 0.94
NEIL1-221ENST00000569035 LETM1O95202 739 aaPredicted RBP20.92■□□□□ 0.94
NEIL1-221ENST00000569035 FKBP4Q02790 459 aaKnown RBP eCLIP20.92■□□□□ 0.94
NEIL1-221ENST00000569035 CRY2Q49AN0 593 aa20.92■□□□□ 0.94
NEIL1-221ENST00000569035 VGLL2Q8N8G2 317 aa20.92■□□□□ 0.94
NEIL1-221ENST00000569035 KLRG2A4D1S0 409 aaPredicted RBP20.92■□□□□ 0.94
NEIL1-221ENST00000569035 HSPD1P10809 573 aaKnown RBP20.92■□□□□ 0.94
NEIL1-221ENST00000569035 SLC5A1P13866 664 aa20.92■□□□□ 0.94
NEIL1-221ENST00000569035 RPS8P62241 208 aaKnown RBP20.92■□□□□ 0.94
NEIL1-221ENST00000569035 HELBQ8NG08 1087 aaPredicted RBP20.92■□□□□ 0.94
NEIL1-221ENST00000569035 RPGRQ92834 1020 aaKnown RBP20.92■□□□□ 0.94
NEIL1-221ENST00000569035 MAST3O60307 1309 aa20.92■□□□□ 0.94
NEIL1-221ENST00000569035 CPA1P15085 419 aa20.91■□□□□ 0.94
NEIL1-221ENST00000569035 ARID4AP29374 1257 aaPredicted RBP20.91■□□□□ 0.94
NEIL1-221ENST00000569035 TOB2Q14106 344 aaPredicted RBP20.91■□□□□ 0.94
NEIL1-221ENST00000569035 CAVIN1Q6NZI2 390 aaKnown RBP20.91■□□□□ 0.94
NEIL1-221ENST00000569035 FGD1P98174 961 aa20.9■□□□□ 0.94
NEIL1-221ENST00000569035 IMMTQ16891 758 aaKnown RBP20.9■□□□□ 0.94
NEIL1-221ENST00000569035 AGXT2Q9BYV1 514 aa20.9■□□□□ 0.94
NEIL1-221ENST00000569035 BSDC1Q9NW68 430 aaPredicted RBP20.9■□□□□ 0.94
NEIL1-221ENST00000569035 ATF5Q9Y2D1 282 aaPredicted RBP20.9■□□□□ 0.94
NEIL1-221ENST00000569035 WDR19Q8NEZ3 1342 aa20.9■□□□□ 0.94
NEIL1-221ENST00000569035 QSER1Q2KHR3 1735 aa20.9■□□□□ 0.94
NEIL1-221ENST00000569035 UBE3CQ15386 1083 aa20.9■□□□□ 0.94
NEIL1-221ENST00000569035 ZSCAN23Q3MJ62 389 aa20.9■□□□□ 0.94
NEIL1-221ENST00000569035 LARP1BQ659C4 914 aaKnown RBP20.9■□□□□ 0.94
NEIL1-221ENST00000569035 AKAP11Q9UKA4 1901 aa20.9■□□□□ 0.94
NEIL1-221ENST00000569035 COL4A1P02462 1669 aa20.89■□□□□ 0.94
NEIL1-221ENST00000569035 TNRC6CQ9HCJ0 1690 aaKnown RBP20.89■□□□□ 0.94
NEIL1-221ENST00000569035 LAMA4Q16363 1823 aa20.89■□□□□ 0.93
NEIL1-221ENST00000569035 LARGE1O95461 756 aa20.89■□□□□ 0.93
NEIL1-221ENST00000569035 HMGN5P82970 282 aaKnown RBP20.89■□□□□ 0.93
NEIL1-221ENST00000569035 SEC62Q99442 399 aaKnown RBP20.89■□□□□ 0.93
NEIL1-221ENST00000569035 PDE6BP35913 854 aa20.88■□□□□ 0.93
NEIL1-221ENST00000569035 UBE2HP62256 183 aa20.88■□□□□ 0.93
NEIL1-221ENST00000569035 GRAPQ13588 217 aa20.88■□□□□ 0.93
NEIL1-221ENST00000569035 CCDC129Q6ZRS4 1044 aa20.88■□□□□ 0.93
NEIL1-221ENST00000569035 GRAPLQ8TC17 118 aaPredicted RBP20.88■□□□□ 0.93
NEIL1-221ENST00000569035 GTF3C6Q969F1 213 aa20.88■□□□□ 0.93
NEIL1-221ENST00000569035 RBM17Q96I25 401 aaKnown RBP20.88■□□□□ 0.93
NEIL1-221ENST00000569035 NDUFB9Q9Y6M9 179 aa20.88■□□□□ 0.93
NEIL1-221ENST00000569035 FGFR2P21802 821 aa20.87■□□□□ 0.93
NEIL1-221ENST00000569035 ADORA1P30542 326 aa20.87■□□□□ 0.93
NEIL1-221ENST00000569035 CHRNDQ07001 517 aa20.87■□□□□ 0.93
NEIL1-221ENST00000569035 WASHC4Q2M389 1173 aa20.87■□□□□ 0.93
NEIL1-221ENST00000569035 Q6ZUG5 572 aa20.87■□□□□ 0.93
NEIL1-221ENST00000569035 RGS22Q8NE09 1264 aa20.87■□□□□ 0.93
NEIL1-221ENST00000569035 GPT2Q8TD30 523 aa20.87■□□□□ 0.93
NEIL1-221ENST00000569035 MINPP1Q9UNW1 487 aa20.87■□□□□ 0.93
NEIL1-221ENST00000569035 MTMR6Q9Y217 621 aa20.87■□□□□ 0.93
NEIL1-221ENST00000569035 CASZ1Q86V15 1759 aa20.87■□□□□ 0.93
NEIL1-221ENST00000569035 SNAP23O00161 211 aa20.87■□□□□ 0.93
NEIL1-221ENST00000569035 HOXA10P31260 410 aaPredicted RBP20.87■□□□□ 0.93
NEIL1-221ENST00000569035 ZAP70P43403 619 aa20.87■□□□□ 0.93
NEIL1-221ENST00000569035 ZNF274Q96GC6 653 aaPredicted RBP20.87■□□□□ 0.93
NEIL1-221ENST00000569035 MTFR1LQ9H019 292 aa20.87■□□□□ 0.93
NEIL1-221ENST00000569035 SRGNP10124 158 aa20.86■□□□□ 0.93
NEIL1-221ENST00000569035 EXOSC10Q01780 885 aaKnown RBP20.86■□□□□ 0.93
NEIL1-221ENST00000569035 LRSAM1Q6UWE0 723 aa20.86■□□□□ 0.93
NEIL1-221ENST00000569035 ZMYM6O95789 1325 aa20.85■□□□□ 0.93
NEIL1-221ENST00000569035 PFKFB2O60825 505 aa20.85■□□□□ 0.93
NEIL1-221ENST00000569035 FOXD4L5Q5VV16 416 aaPredicted RBP20.85■□□□□ 0.93
NEIL1-221ENST00000569035 SLC51AQ86UW1 340 aa20.85■□□□□ 0.93
NEIL1-221ENST00000569035 FOXD4L4Q8WXT5 416 aaPredicted RBP20.85■□□□□ 0.93
NEIL1-221ENST00000569035 OSBP2Q969R2 916 aa20.85■□□□□ 0.93
NEIL1-221ENST00000569035 BRPF3Q9ULD4 1205 aa20.85■□□□□ 0.93
NEIL1-221ENST00000569035 GOLGB1Q14789 3259 aaKnown RBP20.85■□□□□ 0.93
NEIL1-221ENST00000569035 E7EWF7 191 aa20.85■□□□□ 0.93
NEIL1-221ENST00000569035 ADD2P35612 726 aa20.85■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 75.6 ms