RNA–Protein interactions for RNA: ENST00000568651.1

HERPUD1-214, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 3

Gene HERPUD1, Length 458 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-214ENST00000568651 ZNF394Q53GI3 561 aa9.63□□□□□ -0.87
HERPUD1-214ENST00000568651 PEAR1Q5VY43 1037 aaPredicted RBP9.63□□□□□ -0.87
HERPUD1-214ENST00000568651 TRIM22Q8IYM9 498 aa9.63□□□□□ -0.87
HERPUD1-214ENST00000568651 EHD4Q9H223 541 aa9.63□□□□□ -0.87
HERPUD1-214ENST00000568651 ATP13A2Q9NQ11 1180 aa9.63□□□□□ -0.87
HERPUD1-214ENST00000568651 TLR7Q9NYK1 1049 aaKnown RBP9.63□□□□□ -0.87
HERPUD1-214ENST00000568651 PRKAG2Q9UGJ0 569 aa9.63□□□□□ -0.87
HERPUD1-214ENST00000568651 CDK11AQ9UQ88 783 aaPredicted RBP9.63□□□□□ -0.87
HERPUD1-214ENST00000568651 INPP5FQ9Y2H2 1132 aa9.63□□□□□ -0.87
HERPUD1-214ENST00000568651 KHNYNO15037 678 aaKnown RBP9.62□□□□□ -0.87
HERPUD1-214ENST00000568651 PSAPP07602 524 aa9.62□□□□□ -0.87
HERPUD1-214ENST00000568651 MAPTP10636 758 aaKnown RBP9.62□□□□□ -0.87
HERPUD1-214ENST00000568651 GJA8P48165 433 aa9.62□□□□□ -0.87
HERPUD1-214ENST00000568651 PTSQ03393 145 aa9.62□□□□□ -0.87
HERPUD1-214ENST00000568651 LAPTM4AQ15012 233 aa9.62□□□□□ -0.87
HERPUD1-214ENST00000568651 FAM182BQ5T319 152 aa9.62□□□□□ -0.87
HERPUD1-214ENST00000568651 PNMA5Q96PV4 448 aa9.62□□□□□ -0.87
HERPUD1-214ENST00000568651 MARK1Q9P0L2 795 aa9.62□□□□□ -0.87
HERPUD1-214ENST00000568651 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.62□□□□□ -0.87
HERPUD1-214ENST00000568651 DIP2CQ9Y2E4 1556 aa9.62□□□□□ -0.87
HERPUD1-214ENST00000568651 ZMYM3Q14202 1370 aa9.62□□□□□ -0.87
HERPUD1-214ENST00000568651 CYP2E1P05181 493 aaPredicted RBP9.61□□□□□ -0.87
HERPUD1-214ENST00000568651 RLBP1P12271 317 aa9.61□□□□□ -0.87
HERPUD1-214ENST00000568651 TARSP26639 723 aaKnown RBP9.61□□□□□ -0.87
HERPUD1-214ENST00000568651 RIPOR1Q6ZS17 1223 aa9.61□□□□□ -0.87
HERPUD1-214ENST00000568651 RSRP1Q9BUV0 290 aa9.61□□□□□ -0.87
HERPUD1-214ENST00000568651 ZFATQ9P243 1243 aa9.61□□□□□ -0.87
HERPUD1-214ENST00000568651 ATXN7L1Q9ULK2 861 aaPredicted RBP9.61□□□□□ -0.87
HERPUD1-214ENST00000568651 C3P01024 1663 aa9.61□□□□□ -0.87
HERPUD1-214ENST00000568651 MED1Q15648 1581 aaPredicted RBP9.6□□□□□ -0.87
HERPUD1-214ENST00000568651 DCDC2BA2VCK2 349 aa9.6□□□□□ -0.87
HERPUD1-214ENST00000568651 ATP2B1P20020 1258 aa9.6□□□□□ -0.87
HERPUD1-214ENST00000568651 PLAURQ03405 335 aa9.6□□□□□ -0.87
HERPUD1-214ENST00000568651 ARID5AQ03989 594 aa9.6□□□□□ -0.87
HERPUD1-214ENST00000568651 SPEM2Q0P670 501 aa9.6□□□□□ -0.87
HERPUD1-214ENST00000568651 HYAL2Q12891 473 aa9.6□□□□□ -0.87
HERPUD1-214ENST00000568651 VPS37DQ86XT2 251 aa9.6□□□□□ -0.87
HERPUD1-214ENST00000568651 KIFC2Q96AC6 838 aa9.6□□□□□ -0.87
HERPUD1-214ENST00000568651 ABCB6Q9NP58 842 aa9.6□□□□□ -0.87
HERPUD1-214ENST00000568651 KANSL3Q9P2N6 904 aa9.6□□□□□ -0.87
HERPUD1-214ENST00000568651 TTF2Q9UNY4 1162 aaKnown RBP9.6□□□□□ -0.87
HERPUD1-214ENST00000568651 PCDHGB7Q9Y5F8 929 aa9.6□□□□□ -0.87
HERPUD1-214ENST00000568651 KIF14Q15058 1648 aa9.6□□□□□ -0.87
HERPUD1-214ENST00000568651 CNTLNQ9NXG0 1405 aa9.59□□□□□ -0.87
HERPUD1-214ENST00000568651 TMEM238LA0A1B0GVL6 79 aa9.59□□□□□ -0.87
HERPUD1-214ENST00000568651 NFKB1P19838 968 aa9.59□□□□□ -0.87
HERPUD1-214ENST00000568651 TNNI2P48788 182 aa9.59□□□□□ -0.87
HERPUD1-214ENST00000568651 NEUROD1Q13562 356 aa9.59□□□□□ -0.87
HERPUD1-214ENST00000568651 CCNJLQ8IV13 435 aa9.59□□□□□ -0.87
HERPUD1-214ENST00000568651 SPATA32Q96LK8 384 aa9.59□□□□□ -0.87
HERPUD1-214ENST00000568651 LIN7BQ9HAP6 207 aa9.59□□□□□ -0.87
HERPUD1-214ENST00000568651 SENP2Q9HC62 589 aa9.59□□□□□ -0.87
HERPUD1-214ENST00000568651 CUEDC1Q9NWM3 386 aaPredicted RBP9.59□□□□□ -0.87
HERPUD1-214ENST00000568651 PPP1R1BQ9UD71 204 aaPredicted RBP9.59□□□□□ -0.87
HERPUD1-214ENST00000568651 ABCA6Q8N139 1617 aa9.59□□□□□ -0.87
HERPUD1-214ENST00000568651 KDM5CP41229 1560 aa9.58□□□□□ -0.88
HERPUD1-214ENST00000568651 TROQ12816 1431 aaPredicted RBP9.58□□□□□ -0.88
HERPUD1-214ENST00000568651 BNIP3LO60238 219 aa9.58□□□□□ -0.88
HERPUD1-214ENST00000568651 TOM1O60784 492 aa9.58□□□□□ -0.88
HERPUD1-214ENST00000568651 NRLP54845 237 aa9.58□□□□□ -0.88
HERPUD1-214ENST00000568651 GGT6Q6P531 493 aa9.58□□□□□ -0.88
HERPUD1-214ENST00000568651 SV2BQ7L1I2 683 aa9.58□□□□□ -0.88
HERPUD1-214ENST00000568651 KRT25Q7Z3Z0 450 aa9.58□□□□□ -0.88
HERPUD1-214ENST00000568651 TCF12Q99081 682 aa9.58□□□□□ -0.88
HERPUD1-214ENST00000568651 OXCT2Q9BYC2 517 aaPredicted RBP9.58□□□□□ -0.88
HERPUD1-214ENST00000568651 STRN4Q9NRL3 753 aa9.58□□□□□ -0.88
HERPUD1-214ENST00000568651 LATS2Q9NRM7 1088 aa9.58□□□□□ -0.88
HERPUD1-214ENST00000568651 PHF24Q9UPV7 400 aa9.58□□□□□ -0.88
HERPUD1-214ENST00000568651 MLH3Q9UHC1 1453 aa9.58□□□□□ -0.88
HERPUD1-214ENST00000568651 GFRA3O60609 400 aa9.57□□□□□ -0.88
HERPUD1-214ENST00000568651 DBN1Q16643 649 aa9.57□□□□□ -0.88
HERPUD1-214ENST00000568651 NCAPG2Q86XI2 1143 aa9.57□□□□□ -0.88
HERPUD1-214ENST00000568651 CCDC155Q8N6L0 562 aa9.57□□□□□ -0.88
HERPUD1-214ENST00000568651 RASGRP4Q8TDF6 673 aa9.57□□□□□ -0.88
HERPUD1-214ENST00000568651 BHLHE41Q9C0J9 482 aaPredicted RBP9.57□□□□□ -0.88
HERPUD1-214ENST00000568651 AAASQ9NRG9 546 aa9.57□□□□□ -0.88
HERPUD1-214ENST00000568651 CLIP1P30622 1438 aa9.56□□□□□ -0.88
HERPUD1-214ENST00000568651 NPATQ14207 1427 aa9.56□□□□□ -0.88
HERPUD1-214ENST00000568651 AGLP35573 1532 aa9.56□□□□□ -0.88
HERPUD1-214ENST00000568651 CANXP27824 592 aaKnown RBP9.56□□□□□ -0.88
HERPUD1-214ENST00000568651 HNRNPMP52272 730 aaKnown RBP eCLIP9.56□□□□□ -0.88
HERPUD1-214ENST00000568651 FCGRTP55899 365 aa9.56□□□□□ -0.88
HERPUD1-214ENST00000568651 PCSK7Q16549 785 aa9.56□□□□□ -0.88
HERPUD1-214ENST00000568651 DHX32Q7L7V1 743 aaKnown RBP9.56□□□□□ -0.88
HERPUD1-214ENST00000568651 CEP120Q8N960 986 aa9.56□□□□□ -0.88
HERPUD1-214ENST00000568651 CNTNAP3BQ96NU0 1288 aa9.56□□□□□ -0.88
HERPUD1-214ENST00000568651 ZKSCAN3Q9BRR0 538 aa9.56□□□□□ -0.88
HERPUD1-214ENST00000568651 CNTNAP3Q9BZ76 1288 aa9.56□□□□□ -0.88
HERPUD1-214ENST00000568651 CEP44Q9C0F1 390 aa9.56□□□□□ -0.88
HERPUD1-214ENST00000568651 ITPKAP23677 461 aa9.55□□□□□ -0.88
HERPUD1-214ENST00000568651 CCDC85BQ15834 202 aaPredicted RBP9.55□□□□□ -0.88
HERPUD1-214ENST00000568651 RPS26P11Q5JNZ5 115 aaPredicted RBP9.55□□□□□ -0.88
HERPUD1-214ENST00000568651 SOGA3Q5TF21 947 aa9.55□□□□□ -0.88
HERPUD1-214ENST00000568651 DTHD1Q6ZMT9 781 aa9.55□□□□□ -0.88
HERPUD1-214ENST00000568651 TRPM4Q8TD43 1214 aa9.55□□□□□ -0.88
HERPUD1-214ENST00000568651 GPRASP2Q96D09 838 aa9.55□□□□□ -0.88
HERPUD1-214ENST00000568651 ZNF837Q96EG3 531 aaPredicted RBP9.55□□□□□ -0.88
HERPUD1-214ENST00000568651 OSMRQ99650 979 aa9.55□□□□□ -0.88
HERPUD1-214ENST00000568651 DZANK1Q9NVP4 752 aa9.55□□□□□ -0.88
HERPUD1-214ENST00000568651 KBTBD4Q9NVX7 518 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms